Csa3G354530 (gene) Cucumber (Chinese Long) v2

NameCsa3G354530
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 18269402 .. 18269766 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTGAGAAAACTTCATCAGGAGACTTTTTGCCAACGACGCTAACAAGTGTCAAGAAGAGGGTTCGGCAACCTTCAAAGGGATCAAATGCAACGTACCAATCCAAAAATTTGGGGCATTTTGTGTTAGATTTTCACATGAAAGTATTGTGTGTGAATATTTGTGAGATACATATTTTATTAGAATAAGAAAAAACAAATGGTTATCATGGATTCAAAAAGACAAGATTTGAGAAAGAATGGGTTTAAAAGTATAAATGCTGTTTGTGTTGATTACTCGATGGTTTCAGAAGTTGAAAGCTATTCTGAACACTATTATTGACATTCCAATTGCTGTGTACAGAGCCATTAGTGAATCATAA

mRNA sequence

ATGGTTGTTGAGAAAACTTCATCAGGAGACTTTTTGCCAACGACGCTAACAAGTGTCAAGAAGAGGGTTCGGCAACCTTCAAAGGGATCAAATGCAACGTACCAATCCAAAAATTTGGGGCATTTTGTGTTAGATTTTCACATGAAAAAGTTGAAAGCTATTCTGAACACTATTATTGACATTCCAATTGCTGTGTACAGAGCCATTAGTGAATCATAA

Coding sequence (CDS)

ATGGTTGTTGAGAAAACTTCATCAGGAGACTTTTTGCCAACGACGCTAACAAGTGTCAAGAAGAGGGTTCGGCAACCTTCAAAGGGATCAAATGCAACGTACCAATCCAAAAATTTGGGGCATTTTGTGTTAGATTTTCACATGAAAAAGTTGAAAGCTATTCTGAACACTATTATTGACATTCCAATTGCTGTGTACAGAGCCATTAGTGAATCATAA

Protein sequence

MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIIDIPIAVYRAISES*
BLAST of Csa3G354530 vs. TrEMBL
Match: A0A0A0LA58_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G354530 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.0e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID 60
          MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID
Sbjct: 1  MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID 60

Query: 61 IPIAVYRAISES 73
          IPIAVYRAISES
Sbjct: 61 IPIAVYRAISES 72

BLAST of Csa3G354530 vs. NCBI nr
Match: gi|700202726|gb|KGN57859.1| (hypothetical protein Csa_3G354530 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.9e-31
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID 60
          MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID
Sbjct: 1  MVVEKTSSGDFLPTTLTSVKKRVRQPSKGSNATYQSKNLGHFVLDFHMKKLKAILNTIID 60

Query: 61 IPIAVYRAISES 73
          IPIAVYRAISES
Sbjct: 61 IPIAVYRAISES 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LA58_CUCSA2.0e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G354530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202726|gb|KGN57859.1|2.9e-31100.00hypothetical protein Csa_3G354530 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU107562cucumber EST collection version 3.0transcribed_cluster
CU139453cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G354530.1Csa3G354530.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU139453CU139453transcribed_cluster
CU107562CU107562transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None