Csa3G307170 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G307170
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTATA-binding protein-associated factor MOT1, putative; contains IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr3 : 17335815 .. 17337161 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGAAAGTTTAGCAAAGCCACTTGAAAATCAGTTTGTGTTTTACTGGGTTCTGACTCTGAAACTTGGCTGCTCTCTTGTAGTTTTAGTGTGAGCCTATACCTTTCCTTTTCTTTCTCCCTCGTTTTATTGTTGCATACAGTCAATGAACTATCTCGATCAACTGAAAGAATTCACATTCTAACCTCCCTAACTGCTCCAAGAAATCTTTTTTACCCAAAAAGGATGGACTTCTATTTTCATTAGAGTTCTGGGTGGCTAGAAATGGTTTTTACTTGAGATAACTTCGAAGAGGTTAAAATGAAATTTTTGGAAAAGATGTGTCAAATTAGTAGGTTAGGGCAATTTTTTCGGGGAGGTCTTGGTGTAGGGACTTTTTTTTTGTTATAGTGCTGTTTCTCCATCTACTCCTAAGGAATATTATGGTAGCGTTTTGGTTTATTGTTTCAAATTTTTGTAATATTTTATATATATGAGGAAATTGCAAATTGAGTTATGCTCTTATTTCACATTCTTTTAGAATAATCATCTTTACAGTTTTTAGAAACTACTTAAAATCAGGGAACGTGCAGTGCAATAGCTAAACTGATTTTAAACAATACTCTGTACTGTTTGAGGATTCTAATTGAAGTACTAAAATTTCAAACTGATTTTAAATAATATTTTAAATTGTTTGAGGATTCTAATTGAAGTATTATAATTTTTTGTTCTCTTTGTTAGACAAAATTAGTTTATCAACTAAATGGATCTTGATTGATGTAATTATTTTTGTAGGCTATGGACAGAGCCCACAGGTTAGGCCAGCGGAAGGTTGTAAATGTCCATCGGCTCATTATGCGTGGAACGCTAGAAGAAAAAGTTATGAGCCTTCAAAAGTTTAAAGTTTCTATTGCTAATGCTGTCATCAATTCTGAGAATGCCAGTATGAAAACGATGAATACCGATCAATTGCTTGATCTTTTCACAACTGCCGAAACCTCCAAGAAGGTATTATTACTATTAATTTGATTATAGATATTGGTAGCACAATTGAATTTCAATCTATGAAACCTTTTATTCTTCCCTTATGACTATATGAAGTATTGAAAGTAAGTAGAGTAGTTCTAAGTTCTCACCGTCTCTCTCTGGAATCAATAACTGTTGATTTAACTCGGTTCATAAAATGTAGGGAGCGGCGTCAGCATCATCTAAGCAGTCAGATGGTGACTTTGATGGAGAGGTAAAAGCAATGGGTGGAAAGAAGGGTCTGAAAGCCATCCTTGGAGGACTTGAGGAACTCTGGGACCAATCTCAATACACTGAAGAGTACAATCTAAATCAGTTTTTAGCAAAGCTTAATGGCTGA

mRNA sequence

ATGTGTGAAAGTTTAGCAAAGCCACTTGAAAATCAGTTTGTGTTTTACTGGGTTCTGACTCTGAAACTTGGCTGCTCTCTTGTAGTTTTAGTTGCTGTTTCTCCATCTACTCCTAAGGAATATTATGGTAGCGTTTTGGCTATGGACAGAGCCCACAGGTTAGGCCAGCGGAAGGTTGTAAATGTCCATCGGCTCATTATGCGTGGAACGCTAGAAGAAAAAGTTATGAGCCTTCAAAAGTTTAAAGTTTCTATTGCTAATGCTGTCATCAATTCTGAGAATGCCAGTATGAAAACGATGAATACCGATCAATTGCTTGATCTTTTCACAACTGCCGAAACCTCCAAGAAGGGAGCGGCGTCAGCATCATCTAAGCAGTCAGATGGTGACTTTGATGGAGAGGTAAAAGCAATGGGTGGAAAGAAGGGTCTGAAAGCCATCCTTGGAGGACTTGAGGAACTCTGGGACCAATCTCAATACACTGAAGAGTACAATCTAAATCAGTTTTTAGCAAAGCTTAATGGCTGA

Coding sequence (CDS)

ATGTGTGAAAGTTTAGCAAAGCCACTTGAAAATCAGTTTGTGTTTTACTGGGTTCTGACTCTGAAACTTGGCTGCTCTCTTGTAGTTTTAGTTGCTGTTTCTCCATCTACTCCTAAGGAATATTATGGTAGCGTTTTGGCTATGGACAGAGCCCACAGGTTAGGCCAGCGGAAGGTTGTAAATGTCCATCGGCTCATTATGCGTGGAACGCTAGAAGAAAAAGTTATGAGCCTTCAAAAGTTTAAAGTTTCTATTGCTAATGCTGTCATCAATTCTGAGAATGCCAGTATGAAAACGATGAATACCGATCAATTGCTTGATCTTTTCACAACTGCCGAAACCTCCAAGAAGGGAGCGGCGTCAGCATCATCTAAGCAGTCAGATGGTGACTTTGATGGAGAGGTAAAAGCAATGGGTGGAAAGAAGGGTCTGAAAGCCATCCTTGGAGGACTTGAGGAACTCTGGGACCAATCTCAATACACTGAAGAGTACAATCTAAATCAGTTTTTAGCAAAGCTTAATGGCTGA

Protein sequence

MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG*
Homology
[Close]
BLAST of Csa3G307170 vs. Swiss-Prot
Match: BTAF1_ARATH (TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana GN=BTAF1 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.2e-48
Identity = 99/129 (76.74%), Postives = 106/129 (82.17%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQ++VVNVHRLIMRGTLEEKVMSLQKFKVS+AN VIN+ENASMKTMNTDQLL
Sbjct: 1922 AMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLL 1981

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETSKKG  S+     D D     +  G  KG+KAILG LEELWDQSQYTEEYNL
Sbjct: 1982 DLFASAETSKKGGGSSKKGSEDND-----QIAGTGKGMKAILGNLEELWDQSQYTEEYNL 2041

Query: 167  NQFLAKLNG 176
            +QFL KLNG
Sbjct: 2042 SQFLTKLNG 2045

[Close]
BLAST of Csa3G307170 vs. Swiss-Prot
Match: BTAF1_HUMAN (TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.9e-29
Identity = 67/127 (52.76%), Postives = 84/127 (66.14%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHR+GQ++VVNV+RLI RGTLEEK+M LQKFK++IAN VI+ EN+S+++M TDQLL
Sbjct: 1736 AMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLL 1795

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLFT  +  K   A  S+               GK  +K+IL  L +LWDQ QY  EY+L
Sbjct: 1796 DLFTLDKDGKAEKADTST--------------SGKASMKSILENLSDLWDQEQYDSEYSL 1848

Query: 167  NQFLAKL 174
              F+  L
Sbjct: 1856 ENFMHSL 1848

[Close]
BLAST of Csa3G307170 vs. Swiss-Prot
Match: MOT1_YEAST (TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.1e-27
Identity = 64/132 (48.48%), Postives = 86/132 (65.15%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHR+GQ+KVVNV+R+I +GTLEEK+M LQKFK++IA+ V+N +N+ + +M+T QLL
Sbjct: 1738 AMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLL 1797

Query: 107  DLF-----TTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYT 166
            DLF     T+ +  +K    + + +   D   E    G     K  LG L+ELWD SQY 
Sbjct: 1798 DLFDPDNVTSQDNEEKNNGDSQAAKGMEDIANETGLTG---KAKEALGELKELWDPSQYE 1857

Query: 167  EEYNLNQFLAKL 174
            EEYNL+ F+  L
Sbjct: 1858 EEYNLDTFIKTL 1866

[Close]
BLAST of Csa3G307170 vs. Swiss-Prot
Match: MOT1_SCHPO (Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mot1 PE=1 SV=4)

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-26
Identity = 59/127 (46.46%), Postives = 87/127 (68.50%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHR+GQ+KVVNV+RLI RG LEEK+M LQ+FK+++A+ V+N +NA + ++ TDQ+L
Sbjct: 1828 AMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQIL 1887

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF T    ++   +   ++S+   D   + + G    K  L GL E+WD+SQY +E+NL
Sbjct: 1888 DLFNTTADEQQTVQNIDKEESE---DAAGRGLSGTS--KKALEGLPEMWDESQY-DEFNL 1947

Query: 167  NQFLAKL 174
            + F++ L
Sbjct: 1948 DGFISTL 1948

[Close]
BLAST of Csa3G307170 vs. Swiss-Prot
Match: INO80_MOUSE (DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 6.4e-08
Identity = 39/120 (32.50%), Postives = 55/120 (45.83%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQ K V V+RLI +GT+EE+++   K K  I   VI+  N    T+   +++
Sbjct: 1209 AMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVV 1268

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
             L    E  +K       ++   +    VK    K+   A     E+  D  +  E  NL
Sbjct: 1269 SLLLDDEELEKKLRLRQEEKRQQEESNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNL 1328

[Close]
BLAST of Csa3G307170 vs. TrEMBL
Match: A0A0A0LAU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G307170 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 6.5e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1 

Query: 1   MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV 60
           MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV
Sbjct: 1   MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV 60

Query: 61  NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA 120
           NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA
Sbjct: 61  NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA 120

Query: 121 SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG 176
           SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG
Sbjct: 121 SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG 175

[Close]
BLAST of Csa3G307170 vs. TrEMBL
Match: A0A0D2VG18_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.5e-52
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQ+FK+S+ANAVIN+ENAS+KTMNTDQLL
Sbjct: 1342 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINAENASLKTMNTDQLL 1401

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETSKKGA   +SK+SD   DG+ K MG  KGLKAILGGLEELWDQSQYTEEYNL
Sbjct: 1402 DLFASAETSKKGA--TASKRSDSGIDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNL 1461

Query: 167  NQFLAKLNG 176
            +QFLAKLNG
Sbjct: 1462 SQFLAKLNG 1468

[Close]
BLAST of Csa3G307170 vs. TrEMBL
Match: A0A0D2W7N6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.5e-52
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQ+FK+S+ANAVIN+ENAS+KTMNTDQLL
Sbjct: 1371 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINAENASLKTMNTDQLL 1430

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETSKKGA   +SK+SD   DG+ K MG  KGLKAILGGLEELWDQSQYTEEYNL
Sbjct: 1431 DLFASAETSKKGA--TASKRSDSGIDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNL 1490

Query: 167  NQFLAKLNG 176
            +QFLAKLNG
Sbjct: 1491 SQFLAKLNG 1497

[Close]
BLAST of Csa3G307170 vs. TrEMBL
Match: A0A0D2U446_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 8.5e-52
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQ+FK+S+ANAVIN+ENAS+KTMNTDQLL
Sbjct: 1928 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINAENASLKTMNTDQLL 1987

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETSKKGA   +SK+SD   DG+ K MG  KGLKAILGGLEELWDQSQYTEEYNL
Sbjct: 1988 DLFASAETSKKGA--TASKRSDSGIDGDPKLMGTGKGLKAILGGLEELWDQSQYTEEYNL 2047

Query: 167  NQFLAKLNG 176
            +QFLAKLNG
Sbjct: 2048 SQFLAKLNG 2054

[Close]
BLAST of Csa3G307170 vs. TrEMBL
Match: W9RF19_9ROSA (TATA-binding protein-associated factor 172 OS=Morus notabilis GN=L484_005161 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-51
Identity = 107/129 (82.95%), Postives = 120/129 (93.02%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQ+KVVNVHRLIMRGTLEEKVMSLQ+FK+S+ANAVIN+ENASMKTMNTDQLL
Sbjct: 1449 AMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQRFKLSVANAVINAENASMKTMNTDQLL 1508

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETS+KG  ++ SKQSD  FDG+VK  G KKGLKAILGGLEELWDQ+QYTEEYNL
Sbjct: 1509 DLFASAETSRKG--TSVSKQSDIRFDGDVKLPGNKKGLKAILGGLEELWDQTQYTEEYNL 1568

Query: 167  NQFLAKLNG 176
            NQFL+KL+G
Sbjct: 1569 NQFLSKLSG 1575

[Close]
BLAST of Csa3G307170 vs. TAIR10
Match: AT3G54280.2 (AT3G54280.2 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases)

HSP 1 Score: 193.4 bits (490), Expect = 1.2e-49
Identity = 99/129 (76.74%), Postives = 106/129 (82.17%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQ++VVNVHRLIMRGTLEEKVMSLQKFKVS+AN VIN+ENASMKTMNTDQLL
Sbjct: 1953 AMDRAHRLGQKRVVNVHRLIMRGTLEEKVMSLQKFKVSVANTVINAENASMKTMNTDQLL 2012

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLF +AETSKKG  S+     D D     +  G  KG+KAILG LEELWDQSQYTEEYNL
Sbjct: 2013 DLFASAETSKKGGGSSKKGSEDND-----QIAGTGKGMKAILGNLEELWDQSQYTEEYNL 2072

Query: 167  NQFLAKLNG 176
            +QFL KLNG
Sbjct: 2073 SQFLTKLNG 2076

[Close]
BLAST of Csa3G307170 vs. TAIR10
Match: AT2G25170.1 (AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE))

HSP 1 Score: 51.6 bits (122), Expect = 5.7e-07
Identity = 32/86 (37.21%), Postives = 47/86 (54.65%), Query Frame = 1 

Query: 19  LTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSL 78
           L + L  +  V++  S   P   +  + AM RAHRLGQ   V ++RLI RGT+EE++M L
Sbjct: 676 LGINLATADTVIIYDSDWNP---HADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQL 735

Query: 79  QKFKVSIANAVINSENASMKTMNTDQ 105
            K K+ + + V+      +KT N +Q
Sbjct: 736 TKKKMVLEHLVV----GKLKTQNINQ 754

[Close]
BLAST of Csa3G307170 vs. TAIR10
Match: AT5G44800.1 (AT5G44800.1 chromatin remodeling 4)

HSP 1 Score: 51.6 bits (122), Expect = 5.7e-07
Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 1 

Query: 10   ENQFVFYWV-----LTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVVNVHR 69
            +N+FVF        L + L  +  V++  S   P   +  + AM+RAHR+GQ K + V+R
Sbjct: 1072 KNRFVFLLSTRACGLGINLATADTVIIYDSDFNP---HADIQAMNRAHRIGQSKRLLVYR 1131

Query: 70   LIMRGTLEEKVMSLQKFKVSIANAVINSENASMK-----TMNTDQLLDLFTTAETSKKGA 129
            L++R ++EE+++ L K K+ +    +N   +  +        T++L +   +A  +KK  
Sbjct: 1132 LVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEFEDILRWGTEELFN--DSAGENKKDT 1191

Query: 130  ASASSKQSDGDFD--GEVKAMGGKKGLKAILGGLEELWDQSQYTE 163
            A     +S+G+ D   ++++   KKG     GGL +++ Q + TE
Sbjct: 1192 A-----ESNGNLDVIMDLESKSRKKG-----GGLGDVY-QDKCTE 1220

[Close]
BLAST of Csa3G307170 vs. TAIR10
Match: AT1G02670.1 (AT1G02670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 1 

Query: 47  AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVI-NSENASMKTMNTDQL 106
           A DR HR+GQ K V V R IM  T+EEK+++LQK K  +  + + +SE A ++ +  D +
Sbjct: 614 AQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQKKKEDLFESTLGDSEEAVVQKLGEDDI 673

Query: 107 LDLF 110
             LF
Sbjct: 674 KSLF 677

[Close]
BLAST of Csa3G307170 vs. TAIR10
Match: AT3G06400.3 (AT3G06400.3 chromatin-remodeling protein 11)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-06
Identity = 38/112 (33.93%), Postives = 54/112 (48.21%), Query Frame = 1 

Query: 3   ESLAKPLENQFVFYWV-----LTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQR 62
           E+  KP   +FVF        L + L  + VV++  S   P+     + A DRAHR+GQ+
Sbjct: 550 EAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQV---DLQAQDRAHRIGQK 609

Query: 63  KVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSEN-ASMKTMNTDQLLDL 109
           K V V R      +EEKV+     K+++   VI     A  KT+N D+LL +
Sbjct: 610 KEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQM 658

[Close]
BLAST of Csa3G307170 vs. NCBI nr
Match: gi|700202664|gb|KGN57797.1| (hypothetical protein Csa_3G307170 [Cucumis sativus])

HSP 1 Score: 344.7 bits (883), Expect = 9.3e-92
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1 

Query: 1   MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV 60
           MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV
Sbjct: 1   MCESLAKPLENQFVFYWVLTLKLGCSLVVLVAVSPSTPKEYYGSVLAMDRAHRLGQRKVV 60

Query: 61  NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA 120
           NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA
Sbjct: 61  NVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLLDLFTTAETSKKGAA 120

Query: 121 SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG 176
           SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG
Sbjct: 121 SASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNLNQFLAKLNG 175

[Close]
BLAST of Csa3G307170 vs. NCBI nr
Match: gi|778680790|ref|XP_011651396.1| (PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 4.8e-64
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL
Sbjct: 1929 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 1988

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL
Sbjct: 1989 DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 2048

Query: 167  NQFLAKLNG 176
            NQFLAKLNG
Sbjct: 2049 NQFLAKLNG 2057

[Close]
BLAST of Csa3G307170 vs. NCBI nr
Match: gi|659114355|ref|XP_008457028.1| (PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis melo])

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 127/129 (98.45%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVM+LQKFKVSIANAVINSENASMKTMNTDQLL
Sbjct: 1924 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMNLQKFKVSIANAVINSENASMKTMNTDQLL 1983

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLFT+AETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL
Sbjct: 1984 DLFTSAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 2043

Query: 167  NQFLAKLNG 176
            NQFLAKLNG
Sbjct: 2044 NQFLAKLNG 2052

[Close]
BLAST of Csa3G307170 vs. NCBI nr
Match: gi|719964979|ref|XP_010255080.1| (PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 109/129 (84.50%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFK+S+ANAVIN+EN S+KTMNTDQLL
Sbjct: 1906 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKLSVANAVINAENTSLKTMNTDQLL 1965

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLFT A+ S+KG  SA SK SDG+FDG+ K +GG KGLKAILGGLEELWDQSQY EEYNL
Sbjct: 1966 DLFTPAQASRKG--SAVSKSSDGNFDGDSKPIGGGKGLKAILGGLEELWDQSQYAEEYNL 2025

Query: 167  NQFLAKLNG 176
            NQFLAKLNG
Sbjct: 2026 NQFLAKLNG 2032

[Close]
BLAST of Csa3G307170 vs. NCBI nr
Match: gi|719964968|ref|XP_010255046.1| (PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-52
Identity = 109/129 (84.50%), Postives = 118/129 (91.47%), Query Frame = 1 

Query: 47   AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKVSIANAVINSENASMKTMNTDQLL 106
            AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFK+S+ANAVIN+EN S+KTMNTDQLL
Sbjct: 1930 AMDRAHRLGQRKVVNVHRLIMRGTLEEKVMSLQKFKLSVANAVINAENTSLKTMNTDQLL 1989

Query: 107  DLFTTAETSKKGAASASSKQSDGDFDGEVKAMGGKKGLKAILGGLEELWDQSQYTEEYNL 166
            DLFT A+ S+KG  SA SK SDG+FDG+ K +GG KGLKAILGGLEELWDQSQY EEYNL
Sbjct: 1990 DLFTPAQASRKG--SAVSKSSDGNFDGDSKPIGGGKGLKAILGGLEELWDQSQYAEEYNL 2049

Query: 167  NQFLAKLNG 176
            NQFLAKLNG
Sbjct: 2050 NQFLAKLNG 2056

The following BLAST results are available for this feature:
BLAST of Csa3G307170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BTAF1_ARATH2.2e-4876.74TATA-binding protein-associated factor BTAF1 OS=Arabidopsis thaliana GN=BTAF1 PE... [more]
BTAF1_HUMAN2.9e-2952.76TATA-binding protein-associated factor 172 OS=Homo sapiens GN=BTAF1 PE=1 SV=2[more]
MOT1_YEAST6.1e-2748.48TATA-binding protein-associated factor MOT1 OS=Saccharomyces cerevisiae (strain ... [more]
MOT1_SCHPO8.8e-2646.46Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN... [more]
INO80_MOUSE6.4e-0832.50DNA helicase INO80 OS=Mus musculus GN=Ino80 PE=1 SV=2[more]
BLAST of Csa3G307170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAU8_CUCSA6.5e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G307170 PE=4 SV=1[more]
A0A0D2VG18_GOSRA8.5e-5283.72Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1[more]
A0A0D2W7N6_GOSRA8.5e-5283.72Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1[more]
A0A0D2U446_GOSRA8.5e-5283.72Uncharacterized protein OS=Gossypium raimondii GN=B456_013G197700 PE=4 SV=1[more]
W9RF19_9ROSA1.1e-5182.95TATA-binding protein-associated factor 172 OS=Morus notabilis GN=L484_005161 PE=... [more]
BLAST of Csa3G307170 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54280.21.2e-4976.74 DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP b... [more]
AT2G25170.15.7e-0737.21 chromatin remodeling factor CHD3 (PICKLE)[more]
AT5G44800.15.7e-0727.88 chromatin remodeling 4[more]
AT1G02670.11.3e-0642.19 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
AT3G06400.31.7e-0633.93 chromatin-remodeling protein 11[more]
BLAST of Csa3G307170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202664|gb|KGN57797.1|9.3e-92100.00hypothetical protein Csa_3G307170 [Cucumis sativus][more]
gi|778680790|ref|XP_011651396.1|4.8e-64100.00PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis sativus][more]
gi|659114355|ref|XP_008457028.1|3.1e-6398.45PREDICTED: TATA-binding protein-associated factor BTAF1 [Cucumis melo][more]
gi|719964979|ref|XP_010255080.1|1.1e-5284.50PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X2 [Nelumbo nuci... [more]
gi|719964968|ref|XP_010255046.1|1.1e-5284.50PREDICTED: TATA-binding protein-associated factor BTAF1 isoform X1 [Nelumbo nuci... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016740 transferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095251cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G307170.1Csa3G307170.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU095251CU095251transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 47..111
score: 3.98
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 47..101
score: 6.2E-19coord: 134..167
score: 6.2
NoneNo IPR availablePANTHERPTHR10799:SF753SUBFAMILY NOT NAMEDcoord: 47..101
score: 6.2E-19coord: 134..167
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G307170Lsi05G003450Bottle gourd (USVL1VR-Ls)culsiB212
Csa3G307170CSPI03G21290Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G307170Cucurbita maxima (Rimu)cmacuB242
Csa3G307170Cucurbita maxima (Rimu)cmacuB455
Csa3G307170Cucurbita moschata (Rifu)cmocuB229
Csa3G307170Cucurbita moschata (Rifu)cmocuB442
Csa3G307170Melon (DHL92) v3.5.1cumeB246
Csa3G307170Watermelon (Charleston Gray)cuwcgB233
Csa3G307170Watermelon (97103) v1cuwmB245
Csa3G307170Cucurbita pepo (Zucchini)cpecuB547
Csa3G307170Cucurbita pepo (Zucchini)cpecuB600
Csa3G307170Cucumber (Gy14) v2cgybcuB109
Csa3G307170Melon (DHL92) v3.6.1cumedB239
Csa3G307170Silver-seed gourdcarcuB0538
Csa3G307170Silver-seed gourdcarcuB0780
Csa3G307170Watermelon (97103) v2cuwmbB218
Csa3G307170Wax gourdcuwgoB271
Csa3G307170Cucumber (Gy14) v1cgycuB525