Csa3G286050 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G286050
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionDehydroascorbate reductase
LocationChr3 : 16878988 .. 16879485 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGAAAAAGAAATTCTCACTTTGGAGGCAAGGAATCGTTTGCGTACATTTTCCAACGGCATCTATTCGTCATCTGTTCTCTCAGAGGAACACAAACCTCATCTCCAACTCAAAATCCCCCCTTCTTTCTATCACACGATCACTTGAATTTCACTCCATTGGTGACGCTAATGTCGGGCTCCAGAATCCAACCAGCAGCTTCTGTTCTTTCCTCTTCCATCAAGCGCCATATGGGTTTTAGTTTCTACCTTCCTTCCAATTCCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTGCACGATCTCTCTCTGTTTCCATGTCTGTTGCCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACTCTACCCAACAAGCTCGGCGACTGTAATTCCTTCTCTTTATTCCTTCTGTTTCTGTTATTTGCTGTTGGTTCTCTCTATTTCCTGTTTGGAATTTATGTGTGTTTTGAGAAATGA

mRNA sequence

ATGAAAAGAAAAAGAAATTCTCACTTTGGAGGCAAGGAATCGTTTGCGTACATTTTCCAACGGCATCTATTCGTCATCTGTTCTCTCAGAGGAACACAAACCTCATCTCCAACTCAAAATCCCCCCTTCTTTCTATCACACGATCACTTGAATTTCACTCCATTGGTGACGCTAATGTCGGGCTCCAGAATCCAACCAGCAGCTTCTGTTCTTTCCTCTTCCATCAAGCGCCATATGGGTTTTAGTTTCTACCTTCCTTCCAATTCCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTGCACGATCTCTCTCTGTTTCCATGTCTGTTGCCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACTCTACCCAACAAGCTCGGCGACTGTAATTCCTTCTCTTTATTCCTTCTGTTTCTGTTATTTGCTGTTGGTTCTCTCTATTTCCTGTTTGGAATTTATGTGTGTTTTGAGAAATGA

Coding sequence (CDS)

ATGAAAAGAAAAAGAAATTCTCACTTTGGAGGCAAGGAATCGTTTGCGTACATTTTCCAACGGCATCTATTCGTCATCTGTTCTCTCAGAGGAACACAAACCTCATCTCCAACTCAAAATCCCCCCTTCTTTCTATCACACGATCACTTGAATTTCACTCCATTGGTGACGCTAATGTCGGGCTCCAGAATCCAACCAGCAGCTTCTGTTCTTTCCTCTTCCATCAAGCGCCATATGGGTTTTAGTTTCTACCTTCCTTCCAATTCCTCGCTTTCTCCTTTTCACCATTCTTCATTCTCCTTCAGGCGCTCTGGACCTGCACGATCTCTCTCTGTTTCCATGTCTGTTGCCCCTCTTGAAGCCTGCGTCAAAGCTTCCACTACTCTACCCAACAAGCTCGGCGACTGTAATTCCTTCTCTTTATTCCTTCTGTTTCTGTTATTTGCTGTTGGTTCTCTCTATTTCCTGTTTGGAATTTATGTGTGTTTTGAGAAATGA

Protein sequence

MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLEACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK*
Homology
[Close]
BLAST of Csa3G286050 vs. TrEMBL
Match: A0A0A0L7J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G286050 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 8.2e-89
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS 60
           MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS
Sbjct: 1   MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS 60

Query: 61  GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE 120
           GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE
Sbjct: 61  GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE 120

Query: 121 ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK 166
           ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK
Sbjct: 121 ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK 165

[Close]
BLAST of Csa3G286050 vs. TrEMBL
Match: A0A0H3U218_SIRGR (Dehydroascorbate reductase OS=Siraitia grosvenorii PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.8e-18
Identity = 57/92 (61.96%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 55  LVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSM 114
           +VTL+S SRIQPAA VLSSSIK+ +G + Y  SN  +SP HHSS   RRSG  R+LSVSM
Sbjct: 1   MVTLLSSSRIQPAAFVLSSSIKQ-LGINSYPRSNFLVSP-HHSSLCLRRSGARRTLSVSM 60

Query: 115 SVAPLEACVKASTTLPNKLGDCNSFSLFLLFL 147
           S  PLE CVKAS T+PN+LGDC      LL L
Sbjct: 61  SATPLETCVKASITVPNRLGDCPFCQRVLLTL 90

[Close]
BLAST of Csa3G286050 vs. TrEMBL
Match: J9WQY6_POPTO (Dehydroascorbate reductase OS=Populus tomentosa GN=DHAR1 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-08
Identity = 48/96 (50.00%), Postives = 56/96 (58.33%), Query Frame = 1 

Query: 59  MSGSRIQP---AASVLSSSIKRHMGF-SFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSM 118
           MS +RIQP   AA VLSS+IK H G  S  LP+N S +        FRR    R+L+VSM
Sbjct: 1   MSTARIQPTVTAACVLSSTIKHHFGLTSLRLPTNHSAA--------FRRQRIKRNLTVSM 60

Query: 119 SVA----PLEACVKASTTLPNKLGDCNSFSLFLLFL 147
           S      PLE CVKAS T+P+KLGDC      LL L
Sbjct: 61  SATSISDPLEICVKASLTVPDKLGDCPFCQRVLLTL 88

[Close]
BLAST of Csa3G286050 vs. TrEMBL
Match: A9PDJ0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s14550g PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-08
Identity = 48/96 (50.00%), Postives = 56/96 (58.33%), Query Frame = 1 

Query: 59  MSGSRIQP---AASVLSSSIKRHMGF-SFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSM 118
           MS +RIQP   AA VLSS+IK H G  S  LP+N S +        FRR    R+L+VSM
Sbjct: 1   MSTARIQPTVTAACVLSSTIKHHFGLTSLRLPTNHSAA--------FRRQRIKRNLTVSM 60

Query: 119 SVA----PLEACVKASTTLPNKLGDCNSFSLFLLFL 147
           S      PLE CVKAS T+P+KLGDC      LL L
Sbjct: 61  SATSVSEPLEICVKASLTVPDKLGDCPFCQRVLLTL 88

[Close]
BLAST of Csa3G286050 vs. TrEMBL
Match: A0A166U861_HEVBR (Dehydroascorbate reductase OS=Hevea brasiliensis GN=DHAR PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.1e-08
Identity = 44/88 (50.00%), Postives = 53/88 (60.23%), Query Frame = 1 

Query: 52  FTPLVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLS 111
           F P  TL + S    AA   SSS+K H+GF+  LP N+S+   H    S RR    R+LS
Sbjct: 6   FQPTTTLAAAS----AACAFSSSVKHHLGFALRLPRNNSVFRSH----SIRR----RNLS 65

Query: 112 V-SMSVA--PLEACVKASTTLPNKLGDC 137
           V +MS    PLE CVKAS T+PNKLGDC
Sbjct: 66  VFAMSAVSDPLEVCVKASITVPNKLGDC 81

[Close]
BLAST of Csa3G286050 vs. NCBI nr
Match: gi|700202640|gb|KGN57773.1| (hypothetical protein Csa_3G286050 [Cucumis sativus])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 1 

Query: 1   MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS 60
           MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS
Sbjct: 1   MKRKRNSHFGGKESFAYIFQRHLFVICSLRGTQTSSPTQNPPFFLSHDHLNFTPLVTLMS 60

Query: 61  GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE 120
           GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE
Sbjct: 61  GSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAPLE 120

Query: 121 ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK 166
           ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK
Sbjct: 121 ACVKASTTLPNKLGDCNSFSLFLLFLLFAVGSLYFLFGIYVCFEK 165

[Close]
BLAST of Csa3G286050 vs. NCBI nr
Match: gi|449456235|ref|XP_004145855.1| (PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Cucumis sativus])

HSP 1 Score: 156.8 bits (395), Expect = 3.4e-35
Identity = 81/88 (92.05%), Postives = 81/88 (92.05%), Query Frame = 1 

Query: 59  MSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAP 118
           MSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAP
Sbjct: 1   MSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAP 60

Query: 119 LEACVKASTTLPNKLGDCNSFSLFLLFL 147
           LEACVKASTTLPNKLGDC      LL L
Sbjct: 61  LEACVKASTTLPNKLGDCPFCQRVLLTL 88

[Close]
BLAST of Csa3G286050 vs. NCBI nr
Match: gi|659114326|ref|XP_008457014.1| (PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Cucumis melo])

HSP 1 Score: 139.4 bits (350), Expect = 5.6e-30
Identity = 73/88 (82.95%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 59  MSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSMSVAP 118
           MS SRIQPAASVLS+SIKRH GFSF+LPS SS+SPFHHSSFSFRRSG  RSLSVSMSVAP
Sbjct: 1   MSASRIQPAASVLSTSIKRHTGFSFHLPSYSSVSPFHHSSFSFRRSGLTRSLSVSMSVAP 60

Query: 119 LEACVKASTTLPNKLGDCNSFSLFLLFL 147
           LEACVKASTTLPNKLGDC      LL L
Sbjct: 61  LEACVKASTTLPNKLGDCPFCQRVLLTL 88

[Close]
BLAST of Csa3G286050 vs. NCBI nr
Match: gi|595333702|gb|AHM26862.1| (dehydroascorbate reductase [Siraitia grosvenorii])

HSP 1 Score: 99.0 bits (245), Expect = 8.3e-18
Identity = 57/92 (61.96%), Postives = 66/92 (71.74%), Query Frame = 1 

Query: 55  LVTLMSGSRIQPAASVLSSSIKRHMGFSFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSM 114
           +VTL+S SRIQPAA VLSSSIK+ +G + Y  SN  +SP HHSS   RRSG  R+LSVSM
Sbjct: 1   MVTLLSSSRIQPAAFVLSSSIKQ-LGINSYPRSNFLVSP-HHSSLCLRRSGARRTLSVSM 60

Query: 115 SVAPLEACVKASTTLPNKLGDCNSFSLFLLFL 147
           S  PLE CVKAS T+PN+LGDC      LL L
Sbjct: 61  SATPLETCVKASITVPNRLGDCPFCQRVLLTL 90

[Close]
BLAST of Csa3G286050 vs. NCBI nr
Match: gi|743821311|ref|XP_011021383.1| (PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Populus euphratica])

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-08
Identity = 48/96 (50.00%), Postives = 57/96 (59.38%), Query Frame = 1 

Query: 59  MSGSRIQP---AASVLSSSIKRHMGF-SFYLPSNSSLSPFHHSSFSFRRSGPARSLSVSM 118
           MS +R+QP   AA VLSS+IK H G  S  LP+N S +        FRR    R+L+VSM
Sbjct: 1   MSTARVQPTVTAACVLSSTIKHHFGLTSLRLPTNHSAA--------FRRQRIKRNLTVSM 60

Query: 119 SVA----PLEACVKASTTLPNKLGDCNSFSLFLLFL 147
           S A    PLE CVKAS T+P+KLGDC      LL L
Sbjct: 61  SAASVSDPLEICVKASLTVPDKLGDCPFCQRVLLTL 88

The following BLAST results are available for this feature:
BLAST of Csa3G286050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7J0_CUCSA8.2e-89100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G286050 PE=4 SV=1[more]
A0A0H3U218_SIRGR5.8e-1861.96Dehydroascorbate reductase OS=Siraitia grosvenorii PE=2 SV=1[more]
J9WQY6_POPTO2.5e-0850.00Dehydroascorbate reductase OS=Populus tomentosa GN=DHAR1 PE=2 SV=2[more]
A9PDJ0_POPTR2.5e-0850.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s14550g PE=2 SV=1[more]
A0A166U861_HEVBR7.1e-0850.00Dehydroascorbate reductase OS=Hevea brasiliensis GN=DHAR PE=2 SV=1[more]
BLAST of Csa3G286050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202640|gb|KGN57773.1|1.2e-88100.00hypothetical protein Csa_3G286050 [Cucumis sativus][more]
gi|449456235|ref|XP_004145855.1|3.4e-3592.05PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Cucumis sativus][more]
gi|659114326|ref|XP_008457014.1|5.6e-3082.95PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Cucumis melo][more]
gi|595333702|gb|AHM26862.1|8.3e-1861.96dehydroascorbate reductase [Siraitia grosvenorii][more]
gi|743821311|ref|XP_011021383.1|1.6e-0850.00PREDICTED: glutathione S-transferase DHAR3, chloroplastic [Populus euphratica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU141643cucumber EST collection version 3.0transcribed_cluster
CU174373cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G286050.1Csa3G286050.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU174373CU174373transcribed_cluster
CU141643CU141643transcribed_cluster