Csa3G283000 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G283000
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 16737892 .. 16738303 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCACCTCAGCTAACAGTGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAGGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACGGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTACACATTCTGCCCAGTCCTGACAAATCTTGGAGTGACACAATAGACAATTCACCACACAAATGGAATATATCTACGTGACATTTGTGCAGGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

mRNA sequence

ATGGCACCACCTCAGCTAACAGTGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAGGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACGGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTACACATTCTGCCCAGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

Coding sequence (CDS)

ATGGCACCACCTCAGCTAACAGTGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAGGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACGGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTACACATTCTGCCCAGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

Protein sequence

MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILCNDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA*
Homology
[Close]
BLAST of Csa3G283000 vs. TrEMBL
Match: A0A0A0L7H8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283000 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.0e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60
           MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC
Sbjct: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60

Query: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 112
           NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA
Sbjct: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 111

[Close]
BLAST of Csa3G283000 vs. NCBI nr
Match: gi|700202630|gb|KGN57763.1| (hypothetical protein Csa_3G283000 [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-58
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1 

Query: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60
           MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC
Sbjct: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60

Query: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 112
           NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA
Sbjct: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 111

The following BLAST results are available for this feature:
BLAST of Csa3G283000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7H8_CUCSA1.0e-58100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G283000 PE=4 SV=1[more]
BLAST of Csa3G283000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202630|gb|KGN57763.1|1.5e-58100.00hypothetical protein Csa_3G283000 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G283000.1Csa3G283000.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G283000CSPI03G20810Wild cucumber (PI 183967)cpicuB120
Csa3G283000CsGy3G020410Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G283000Melon (DHL92) v3.6.1cumedB239
Csa3G283000Silver-seed gourdcarcuB0513
Csa3G283000Silver-seed gourdcarcuB0780
Csa3G283000Watermelon (97103) v2cuwmbB218
Csa3G283000Wax gourdcuwgoB271
Csa3G283000Cucumber (Gy14) v1cgycuB003
Csa3G283000Cucurbita maxima (Rimu)cmacuB242
Csa3G283000Cucurbita maxima (Rimu)cmacuB455
Csa3G283000Cucurbita moschata (Rifu)cmocuB229
Csa3G283000Cucurbita moschata (Rifu)cmocuB442
Csa3G283000Melon (DHL92) v3.5.1cumeB161
Csa3G283000Melon (DHL92) v3.5.1cumeB246
Csa3G283000Watermelon (Charleston Gray)cuwcgB233
Csa3G283000Watermelon (97103) v1cuwmB245
Csa3G283000Cucurbita pepo (Zucchini)cpecuB547
Csa3G283000Cucurbita pepo (Zucchini)cpecuB600
Csa3G283000Bottle gourd (USVL1VR-Ls)culsiB212