CsGy3G020410 (gene) Cucumber (Gy14) v2

Overview
NameCsGy3G020410
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr3 : 17177664 .. 17178075 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCACCTCAGCTAACAATGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAAGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACTGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTGCACATTCTACCCAGTCCTGACAAATCATGGAGTGACACAATAGACAATTCACCACACAAATGGAATATATCTACGCGACATTTGTGCAGGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

mRNA sequence

ATGGCACCACCTCAGCTAACAATGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAAGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACTGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTGCACATTCTACCCAGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

Coding sequence (CDS)

ATGGCACCACCTCAGCTAACAATGGTTGATGGAAATGGATGTGAAATTACCGTAGAGGAGGAAAGTTGTAGGGACACAGAAGTGCCAAGCGAGAGAAACTGGGGAGTTAAAAGAGCAAATAGCAAATTTAAACAATCAAATGTGATGACTGGTCGAGATGGTCCATCAACTATCTTATGTAATGACCAATATGAGTCGCTTACTGGTTGCACATTCTACCCAGGCGTACCGCAGCCCATCATTGCATCGAACTTTGTGGCCCTCATTCCTCCTATCAATGTTCCAAACTCACTTCCTGAAGATGCAAAAAACTATCCTCCTCAACTCGAAGCTTAA

Protein sequence

MAPPQLTMVDGNGCEITVEEESCRDTEVPSERNWGVKRANSKFKQSNVMTGRDGPSTILCNDQYESLTGCTFYPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA
Homology
[Close]
BLAST of CsGy3G020410 vs. NCBI nr
Match: KGN57763.1 (hypothetical protein Csa_3G283000 [Cucumis sativus])

HSP 1 Score: 218.8 bits (556), Expect = 9.4e-54
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MAPPQLTMVDGNGCEITVEEESCRDTEVPSERNWGVKRANSKFKQSNVMTGRDGPSTILC 60
           MAPPQLT+VDGNGCEITVEEE CRDTEVPSERN GVKRANSKFKQSNVMTGRDGPSTILC
Sbjct: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60

Query: 61  NDQYESLTGCTFYPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 112
           NDQYESLTG TF PGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA
Sbjct: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 111

[Close]
BLAST of CsGy3G020410 vs. TrEMBL
Match: tr|A0A0A0L7H8|A0A0A0L7H8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G283000 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.2e-54
Identity = 106/111 (95.50%), Postives = 107/111 (96.40%), Query Frame = 0 

Query: 1   MAPPQLTMVDGNGCEITVEEESCRDTEVPSERNWGVKRANSKFKQSNVMTGRDGPSTILC 60
           MAPPQLT+VDGNGCEITVEEE CRDTEVPSERN GVKRANSKFKQSNVMTGRDGPSTILC
Sbjct: 1   MAPPQLTVVDGNGCEITVEEEGCRDTEVPSERNGGVKRANSKFKQSNVMTGRDGPSTILC 60

Query: 61  NDQYESLTGCTFYPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 112
           NDQYESLTG TF PGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA
Sbjct: 61  NDQYESLTGYTFCPGVPQPIIASNFVALIPPINVPNSLPEDAKNYPPQLEA 111

The following BLAST results are available for this feature:
BLAST of CsGy3G020410 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57763.19.4e-5495.50hypothetical protein Csa_3G283000 [Cucumis sativus][more]
BLAST of CsGy3G020410 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy3G020410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy3G020410 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7H8|A0A0A0L7H8_CUCSA6.2e-5495.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G283000 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy3G020410.1CsGy3G020410.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy3G020410Csa3G283000Cucumber (Chinese Long) v2cgybcuB109
CsGy3G020410CSPI03G20810Wild cucumber (PI 183967)cgybcpiB110
CsGy3G020410CsaV3_3G020770Cucumber (Chinese Long) v3cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy3G020410Wax gourdcgybwgoB259
CsGy3G020410Cucurbita maxima (Rimu)cgybcmaB308
CsGy3G020410Cucurbita maxima (Rimu)cgybcmaB368
CsGy3G020410Cucurbita moschata (Rifu)cgybcmoB281
CsGy3G020410Cucurbita moschata (Rifu)cgybcmoB339
CsGy3G020410Cucurbita pepo (Zucchini)cgybcpeB380
CsGy3G020410Cucurbita pepo (Zucchini)cgybcpeB397
CsGy3G020410Bottle gourd (USVL1VR-Ls)cgyblsiB199
CsGy3G020410Melon (DHL92) v3.5.1cgybmeB212
CsGy3G020410Melon (DHL92) v3.6.1cgybmedB216
CsGy3G020410Watermelon (Charleston Gray)cgybwcgB217
CsGy3G020410Watermelon (97103) v1cgybwmB232
CsGy3G020410Silver-seed gourdcarcgybB0489
CsGy3G020410Silver-seed gourdcarcgybB0757
CsGy3G020410Watermelon (97103) v2cgybwmbB209