Csa3G271390 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G271390
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 16456398 .. 16456892 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTATATCTGACACCATCAAAACTCACCCCGAATGGCTCAATATAGGTGAAGAGTGGGCAAAATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGAACGGAGAAGAAAAGGGCGACAACTAGGTTTTCAAGAGAAGGAAGATCATATAGTTTCCTTCTTTTGTTTGCACTAGTAGGGGTG

mRNA sequence

ATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGA

Coding sequence (CDS)

ATGGTGCAAAGTAGCTCGACTTGTTCGGATGGCTCAACCTGGATGGAAGGATGGCTCAGATGGTGGCTCAGACGTGAGAAGATCGACTCGAGTGAAGAAAGAATGGAGACTCTTCGGCTTCACGATGGCGGAGAGTCGCGGCGAAGATCCACACGTTGGATCGAAGGAAACTTGGCTGGAGGCTTCGCTGGGTGGAATGCGACGGCGGAAGAAAGATGGAGCTTAGCGGCGACAGTGGCGCACAACGGCTCGCGAGCCAAAGATGAACGCGCGAAGACTAGCTTCGTTTGTGCTTGGACGGTGGTGAACATAGTCTGTGGTGGTGCGACCTTTAATGGAGATCGGTGA

Protein sequence

MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAGGFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR*
Homology
[Close]
BLAST of Csa3G271390 vs. TrEMBL
Match: A0A0A0LCG0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271390 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-62
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60
           MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG
Sbjct: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60

Query: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 116
           GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR
Sbjct: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 115

[Close]
BLAST of Csa3G271390 vs. NCBI nr
Match: gi|700202613|gb|KGN57746.1| (hypothetical protein Csa_3G271390 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 2.3e-62
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 1 

Query: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60
           MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG
Sbjct: 1   MVQSSSTCSDGSTWMEGWLRWWLRREKIDSSEERMETLRLHDGGESRRRSTRWIEGNLAG 60

Query: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 116
           GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR
Sbjct: 61  GFAGWNATAEERWSLAATVAHNGSRAKDERAKTSFVCAWTVVNIVCGGATFNGDR 115

The following BLAST results are available for this feature:
BLAST of Csa3G271390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCG0_CUCSA1.6e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271390 PE=4 SV=1[more]
BLAST of Csa3G271390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202613|gb|KGN57746.1|2.3e-62100.00hypothetical protein Csa_3G271390 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G271390.1Csa3G271390.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G271390CSPI03G20610Wild cucumber (PI 183967)cpicuB120
Csa3G271390Cucsa.031460Cucumber (Gy14) v1cgycuB003
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G271390Cucurbita maxima (Rimu)cmacuB242
Csa3G271390Cucurbita maxima (Rimu)cmacuB455
Csa3G271390Cucurbita moschata (Rifu)cmocuB229
Csa3G271390Cucurbita moschata (Rifu)cmocuB442
Csa3G271390Melon (DHL92) v3.5.1cumeB161
Csa3G271390Watermelon (Charleston Gray)cuwcgB229
Csa3G271390Watermelon (Charleston Gray)cuwcgB233
Csa3G271390Watermelon (97103) v1cuwmB247
Csa3G271390Cucurbita pepo (Zucchini)cpecuB547
Csa3G271390Cucurbita pepo (Zucchini)cpecuB600
Csa3G271390Bottle gourd (USVL1VR-Ls)culsiB212
Csa3G271390Cucumber (Gy14) v2cgybcuB109
Csa3G271390Melon (DHL92) v3.6.1cumedB228
Csa3G271390Silver-seed gourdcarcuB0513
Csa3G271390Silver-seed gourdcarcuB0780
Csa3G271390Watermelon (97103) v2cuwmbB213
Csa3G271390Watermelon (97103) v2cuwmbB218
Csa3G271390Wax gourdcuwgoB271