Csa3G271330 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G271330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 16424086 .. 16424379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTGTTAGCTACTCCCTCACCGAGAGGATTGCCTTTTGTGTCTTTGTGCCTTTACGTCTTGTATTCATGTCCCTCTTTCTATGCAAAGGAAGTAAACAAATTTGGTCTTTATGACCCCATAGAACTTCTCTTTCTCTATAGTAGTTATATTCTGATGTTGCTTCTCGTTCTTGCAGAGCTTGCAAGAGGTTTTGAACTAGATGGATATCAAAGAGGTTCACGCTTATTGCTTATGCTATCTAAAGCAGTTGCAATCTCGTTTTCTGAGTACACAACTCTTCCACCTTAG

mRNA sequence

ATGCATTTGTTAGCTACTCCCTCACCGAGAGGATTGCCTTTTGTGTCTTTGTGCCTTTACGTCTTGTATTCATGTCCCTCTTTCTATGCAAAGGAAGTAAACAAATTTGGTCTTTATGACCCCATAGAACTTCTCTTTCTCTATAGTAGTTATATTCTGATGTTGCTTCTCGTTCTTGCAGAGCTTGCAAGAGGTTTTGAACTAGATGGATATCAAAGAGGTTCACGCTTATTGCTTATGCTATCTAAAGCAGTTGCAATCTCGTTTTCTGAGTACACAACTCTTCCACCTTAG

Coding sequence (CDS)

ATGCATTTGTTAGCTACTCCCTCACCGAGAGGATTGCCTTTTGTGTCTTTGTGCCTTTACGTCTTGTATTCATGTCCCTCTTTCTATGCAAAGGAAGTAAACAAATTTGGTCTTTATGACCCCATAGAACTTCTCTTTCTCTATAGTAGTTATATTCTGATGTTGCTTCTCGTTCTTGCAGAGCTTGCAAGAGGTTTTGAACTAGATGGATATCAAAGAGGTTCACGCTTATTGCTTATGCTATCTAAAGCAGTTGCAATCTCGTTTTCTGAGTACACAACTCTTCCACCTTAG

Protein sequence

MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLAELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP*
Homology
[Close]
BLAST of Csa3G271330 vs. TrEMBL
Match: A0A0A0L6X8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271330 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 4.6e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA 60
          MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA
Sbjct: 1  MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA 60

Query: 61 ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP 98
          ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP
Sbjct: 61 ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP 97

[Close]
BLAST of Csa3G271330 vs. NCBI nr
Match: gi|700202607|gb|KGN57740.1| (hypothetical protein Csa_3G271330 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 6.6e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA 60
          MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA
Sbjct: 1  MHLLATPSPRGLPFVSLCLYVLYSCPSFYAKEVNKFGLYDPIELLFLYSSYILMLLLVLA 60

Query: 61 ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP 98
          ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP
Sbjct: 61 ELARGFELDGYQRGSRLLLMLSKAVAISFSEYTTLPP 97

The following BLAST results are available for this feature:
BLAST of Csa3G271330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6X8_CUCSA4.6e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G271330 PE=4 SV=1[more]
BLAST of Csa3G271330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202607|gb|KGN57740.1|6.6e-47100.00hypothetical protein Csa_3G271330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G271330.1Csa3G271330.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G271330CSPI03G20560Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G271330Melon (DHL92) v3.5.1cumeB161
Csa3G271330Watermelon (Charleston Gray)cuwcgB233
Csa3G271330Watermelon (97103) v1cuwmB247
Csa3G271330Cucurbita pepo (Zucchini)cpecuB547
Csa3G271330Cucurbita pepo (Zucchini)cpecuB600
Csa3G271330Bottle gourd (USVL1VR-Ls)culsiB212
Csa3G271330Cucumber (Gy14) v2cgybcuB109
Csa3G271330Melon (DHL92) v3.6.1cumedB228
Csa3G271330Silver-seed gourdcarcuB0513
Csa3G271330Silver-seed gourdcarcuB0780
Csa3G271330Watermelon (97103) v2cuwmbB218
Csa3G271330Wax gourdcuwgoB271
Csa3G271330Cucumber (Gy14) v1cgycuB003
Csa3G271330Cucurbita maxima (Rimu)cmacuB242
Csa3G271330Cucurbita maxima (Rimu)cmacuB455
Csa3G271330Cucurbita moschata (Rifu)cmocuB229
Csa3G271330Cucurbita moschata (Rifu)cmocuB442