Csa3G258130 (gene) Cucumber (Chinese Long) v2

NameCsa3G258130
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15995293 .. 15995716 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCGCTAGGAAACGACGAAGTAACAGTGCCAAAACAGCCACCACTCGGTCATTCCCCTGACTCGTTCAGACAGAGTTCAGAATCAGTAAAGCCCATCATGTTCCAACACGCAAAACCCACAAAGAAGGAGAGATTGAGAAACAGAAACAGCGGGTGACCAAAGAAGAAAAATGGAAACAGAACAGAGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGGTGAAGAAACCACGCGCAGGGGAGTGGAATGGAAATAT

mRNA sequence

ATGGAAACAGAACAGAGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGGTGA

Coding sequence (CDS)

ATGGAAACAGAACAGAGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGGTGA

Protein sequence

METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMKGDMQLQGEREGW*
BLAST of Csa3G258130 vs. TrEMBL
Match: A0A0A0LCC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258130 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.8e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
          METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60

Query: 61 GDMQLQGEREGW 73
          GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72

BLAST of Csa3G258130 vs. NCBI nr
Match: gi|700202578|gb|KGN57711.1| (hypothetical protein Csa_3G258130 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 4.0e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 1

Query: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
          METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60

Query: 61 GDMQLQGEREGW 73
          GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LCC9_CUCSA2.8e-33100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258130 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202578|gb|KGN57711.1|4.0e-33100.00hypothetical protein Csa_3G258130 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G258130.1Csa3G258130.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G258130CSPI03G20300Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None