CSPI03G20300 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G20300
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 16102064 .. 16102279 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG

mRNA sequence

ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG

Coding sequence (CDS)

ATGGAAACAGAACAGGGGGAGCAGATAGAGAACAGTCCTCAAAAGCGGGGAAAGGGAAGTGAAAGAGGGGGATTGAACCGGGGTGGACGAGGTCTTGTGATCACGATAACCAAGAGAATGAAGCTCGAGGCGACGCCCCTGAAAGCTTTTTTTCTGCAAAACCCAAGAGAGAAAATGAAAGGGGATATGCAGTTGCAGGGAGAGCGTGAAGGATGG
Homology
[Close]
BLAST of CSPI03G20300 vs. TrEMBL
Match: A0A0A0LCC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258130 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 5.8e-31
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 1 

Query: 1  METEQGEQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
          METEQ EQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60

Query: 61 GDMQLQGEREGW 73
          GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72

[Close]
BLAST of CSPI03G20300 vs. NCBI nr
Match: gi|700202578|gb|KGN57711.1| (hypothetical protein Csa_3G258130 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 8.3e-31
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 1 

Query: 1  METEQGEQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60
          METEQ EQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK
Sbjct: 1  METEQREQIENSPQKRGKGSERGGLNRGGRGLVITITKRMKLEATPLKAFFLQNPREKMK 60

Query: 61 GDMQLQGEREGW 73
          GDMQLQGEREGW
Sbjct: 61 GDMQLQGEREGW 72

The following BLAST results are available for this feature:
BLAST of CSPI03G20300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G20300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCC9_CUCSA5.8e-3198.61Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258130 PE=4 SV=1[more]
BLAST of CSPI03G20300 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G20300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202578|gb|KGN57711.1|8.3e-3198.61hypothetical protein Csa_3G258130 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G20300.1CSPI03G20300.1mRNA