Csa3G251920 (gene) Cucumber (Chinese Long) v2

NameCsa3G251920
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15655928 .. 15656154 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCTTTTACAAGATATTCAGGTACTCCTACGTAGACAGAGTAGCTATCTTGATTTGACTGGTTTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

mRNA sequence

ATGAACCTTTTACAAGATATTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

Coding sequence (CDS)

ATGAACCTTTTACAAGATATTCAGCGCTTCAATTCCTCCTTGAATATACCAAACGTGCTGTGGGCCTTCATACTTGATTATATCAGAGTGCAAGATTTTGTCCTTACTTTACTGCTGTTTGAAATGTATGCTTTCTGTGGGGATATCATTGCTTTATTTGAATCTGATCCCTATTGGTAG

Protein sequence

MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW*
BLAST of Csa3G251920 vs. TrEMBL
Match: A0A0A0LAJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251920 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.6e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 60
          MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 59

BLAST of Csa3G251920 vs. NCBI nr
Match: gi|700202549|gb|KGN57682.1| (hypothetical protein Csa_3G251920 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 5.1e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1

Query: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 60
          MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW
Sbjct: 1  MNLLQDIQRFNSSLNIPNVLWAFILDYIRVQDFVLTLLLFEMYAFCGDIIALFESDPYW 59

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LAJ7_CUCSA3.6e-26100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G251920 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202549|gb|KGN57682.1|5.1e-26100.00hypothetical protein Csa_3G251920 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU110512cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G251920.1Csa3G251920.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU110512CU110512transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None