Csa3G233990 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G233990
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMate efflux family protein; contains IPR002528 (Multi antimicrobial extrusion protein)
LocationChr3 : 15132790 .. 15133433 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGGTAATCTCTAATATTTACAATATTTCAGCCCATAGCATATAAGAAATGGAGTATTCAACTATTATGAGGATGTCAAAATTTGTTGCATTTTCCTATCCAAAGCTCATTAACAACACTAAAACTCAACTTTACCTCGTTAAAATTTGTTCTAAATTCCAAAGAGAATTTGCCTATGATTATGATAACTCGGCTTTATCTGTTTTGGTTTTAGTAGTGTACCTCTTTAGGCAGTTAACTTGTTTCTTGTTCTTTAGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAG

mRNA sequence

ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAG

Coding sequence (CDS)

ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAG

Protein sequence

MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH*
Homology
[Close]
BLAST of Csa3G233990 vs. Swiss-Prot
Match: DTX18_ARATH (Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33
Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + ++LQ SCI++   +I++++LW +TE + +LL Q+P
Sbjct: 86  MTGLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDP 145

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
            IS+ +A+YMK+L P L AYG LQNI+RF QTQ +V PLVLFS +P++I+I   Y LVH
Sbjct: 146 SISKQAALYMKYLAPGLLAYGFLQNILRFCQTQCIVTPLVLFSFLPLVINIGTTYALVH 204

[Close]
BLAST of Csa3G233990 vs. Swiss-Prot
Match: DTX19_ARATH (Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           + GLSG+LETLCGQ FG K Y  + ++LQ SCI++   SI++++ W +TE I  LL Q+P
Sbjct: 94  MVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDP 153

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
            IS+ +A+YMK+  P L AYG LQNI+RF QTQ ++ PLV+FS VP++I+I  AY LV+
Sbjct: 154 SISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVY 212

[Close]
BLAST of Csa3G233990 vs. Swiss-Prot
Match: DTX9_ARATH (Protein DETOXIFICATION 9 OS=Arabidopsis thaliana GN=DTX9 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.7e-24
Identity = 48/117 (41.03%), Postives = 80/117 (68.38%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           GLSG+LETLCGQA+G K Y K+  Y   S +     S+ +S+LW++  QIL+LL+Q+P+I
Sbjct: 85  GLSGSLETLCGQAYGAKQYHKLGSYTFTSIVFLLIISVPISILWMFMNQILLLLHQDPQI 144

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           + ++ +Y  +L+P LF Y +L++++R+ Q+Q ++ P+VL S   +  H+P+ + +VH
Sbjct: 145 AELAGVYCLWLVPALFGYSVLESLVRYFQSQSLIYPMVLSSLAALSFHVPLCWLMVH 201

[Close]
BLAST of Csa3G233990 vs. Swiss-Prot
Match: DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-23
Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           G + ALETLCGQA+G K YGK+ + +Q +  +    S+ LS++W  TEQILVL++Q+  I
Sbjct: 81  GTASALETLCGQAYGAKLYGKLGIQMQRAMFVLLILSVPLSIIWANTEQILVLVHQDKSI 140

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAY 126
           + ++  Y K++IP LFAYGLLQ I RFLQ Q  V P+ + S +   +H+ + +
Sbjct: 141 ASVAGSYAKYMIPSLFAYGLLQCINRFLQAQNNVFPVFVCSGITTCLHLLLCW 193

[Close]
BLAST of Csa3G233990 vs. Swiss-Prot
Match: DTX3_ARATH (Protein DETOXIFICATION 3 OS=Arabidopsis thaliana GN=DTX3 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-22
Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           GL+GALETLCGQA+G K Y K+  Y   +        +++SVLWIY E++L+ L Q+P+I
Sbjct: 84  GLAGALETLCGQAYGAKQYEKIGTYTYSATASNIPICVLISVLWIYIEKLLISLGQDPDI 143

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           SR++  Y  +LIP LFA+     + RFL  Q +V+PL+  +   +L HIP+ +  V+
Sbjct: 144 SRVAGSYALWLIPALFAHAFFIPLTRFLLAQGLVLPLLYCTLTTLLFHIPVCWAFVY 200

[Close]
BLAST of Csa3G233990 vs. TrEMBL
Match: A0A0A0L9H5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G233990 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 4.1e-67
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE 60
           MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE
Sbjct: 1   MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE 60

Query: 61  QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH 120
           QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH
Sbjct: 61  QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH 120

Query: 121 IPIAYGLVH 130
           IPIAYGLVH
Sbjct: 121 IPIAYGLVH 129

[Close]
BLAST of Csa3G233990 vs. TrEMBL
Match: A0A0D2VGN0_GOSRA (Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_013G170000 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.0e-39
Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + +YLQ SCI++FF SII+SVLW +TE ILVLL+Q+P
Sbjct: 86  MTGLSGALETLCGQGFGAKMYKMLGIYLQASCIISFFFSIIISVLWSFTEPILVLLHQDP 145

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           EISR +A+YMK+LIP LFAYG LQNI+RFLQTQ +V+PLV+FS VP+ IH  I Y LV+
Sbjct: 146 EISRAAAVYMKYLIPGLFAYGFLQNILRFLQTQSIVIPLVVFSVVPLGIHFGIVYSLVN 204

[Close]
BLAST of Csa3G233990 vs. TrEMBL
Match: U7DZI9_POPTR (Protein DETOXIFICATION OS=Populus trichocarpa GN=POPTR_0131s00220g PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 8.0e-39
Identity = 76/122 (62.30%), Postives = 100/122 (81.97%), Query Frame = 1 

Query: 8   ICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLY 67
           I  +TGLSGALETLCGQAFG K Y  + ++LQ SCI++F CSII+S++W+YTE +L+ L 
Sbjct: 91  IAFMTGLSGALETLCGQAFGAKLYRTLGIHLQASCIISFLCSIIISIIWLYTEPLLIFLR 150

Query: 68  QEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGL 127
           Q+P+IS+ +A+Y+K+LIP +FA+G LQNI+RFLQTQ VVMPL+L S +PM IHI  AY L
Sbjct: 151 QDPQISKAAALYLKYLIPGIFAFGFLQNILRFLQTQSVVMPLILLSGIPMCIHIGTAYAL 210

Query: 128 VH 130
           VH
Sbjct: 211 VH 212

[Close]
BLAST of Csa3G233990 vs. TrEMBL
Match: A0A0D2U2V2_GOSRA (Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_013G169900 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-38
Identity = 80/119 (67.23%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + +YLQ SCI++FF SII+SVLW +TE ILVLL+Q+P
Sbjct: 86  MTGLSGALETLCGQGFGAKMYKMLGIYLQASCIISFFFSIIISVLWSFTEPILVLLHQDP 145

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           EISR +A+Y+K+LIP LFAYG LQNI+RFLQTQ VV+PLV+FS VP+ IH  + Y LV+
Sbjct: 146 EISRAAAVYIKYLIPGLFAYGFLQNILRFLQTQSVVIPLVVFSVVPLGIHFGVVYSLVN 204

[Close]
BLAST of Csa3G233990 vs. TrEMBL
Match: A0A061F6P7_THECC (Protein DETOXIFICATION OS=Theobroma cacao GN=TCM_046871 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-38
Identity = 78/119 (65.55%), Postives = 98/119 (82.35%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + +YLQ SCI++F  S+I+S+LW YTE ILVLL+Q+P
Sbjct: 170 MTGLSGALETLCGQGFGAKMYRMLGIYLQASCIISFLFSVIISILWFYTEPILVLLHQDP 229

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           EISR +A+YMK+LIP LFAYG +QNI+RFLQTQ +V+PLVLFS +P+ IH  I Y LV+
Sbjct: 230 EISRTAALYMKYLIPGLFAYGFVQNILRFLQTQSIVIPLVLFSFIPLGIHFGIVYSLVN 288

[Close]
BLAST of Csa3G233990 vs. TAIR10
Match: AT3G23550.1 (AT3G23550.1 MATE efflux family protein)

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-34
Identity = 66/119 (55.46%), Postives = 89/119 (74.79%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + ++LQ SCI++   +I++++LW +TE + +LL Q+P
Sbjct: 86  MTGLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDP 145

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
            IS+ +A+YMK+L P L AYG LQNI+RF QTQ +V PLVLFS +P++I+I   Y LVH
Sbjct: 146 SISKQAALYMKYLAPGLLAYGFLQNILRFCQTQCIVTPLVLFSFLPLVINIGTTYALVH 204

[Close]
BLAST of Csa3G233990 vs. TAIR10
Match: AT3G23560.1 (AT3G23560.1 MATE efflux family protein)

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-32
Identity = 63/119 (52.94%), Postives = 86/119 (72.27%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           + GLSG+LETLCGQ FG K Y  + ++LQ SCI++   SI++++ W +TE I  LL Q+P
Sbjct: 94  MVGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDP 153

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
            IS+ +A+YMK+  P L AYG LQNI+RF QTQ ++ PLV+FS VP++I+I  AY LV+
Sbjct: 154 SISKQAALYMKYQAPGLLAYGFLQNILRFCQTQSIIAPLVIFSFVPLVINIATAYVLVY 212

[Close]
BLAST of Csa3G233990 vs. TAIR10
Match: AT1G66760.2 (AT1G66760.2 MATE efflux family protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25
Identity = 48/117 (41.03%), Postives = 80/117 (68.38%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           GLSG+LETLCGQA+G K Y K+  Y   S +     S+ +S+LW++  QIL+LL+Q+P+I
Sbjct: 85  GLSGSLETLCGQAYGAKQYHKLGSYTFTSIVFLLIISVPISILWMFMNQILLLLHQDPQI 144

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           + ++ +Y  +L+P LF Y +L++++R+ Q+Q ++ P+VL S   +  H+P+ + +VH
Sbjct: 145 AELAGVYCLWLVPALFGYSVLESLVRYFQSQSLIYPMVLSSLAALSFHVPLCWLMVH 201

[Close]
BLAST of Csa3G233990 vs. TAIR10
Match: AT1G73700.1 (AT1G73700.1 MATE efflux family protein)

HSP 1 Score: 108.6 bits (270), Expect = 2.9e-24
Identity = 51/113 (45.13%), Postives = 74/113 (65.49%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           G + ALETLCGQA+G K YGK+ + +Q +  +    S+ LS++W  TEQILVL++Q+  I
Sbjct: 81  GTASALETLCGQAYGAKLYGKLGIQMQRAMFVLLILSVPLSIIWANTEQILVLVHQDKSI 140

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAY 126
           + ++  Y K++IP LFAYGLLQ I RFLQ Q  V P+ + S +   +H+ + +
Sbjct: 141 ASVAGSYAKYMIPSLFAYGLLQCINRFLQAQNNVFPVFVCSGITTCLHLLLCW 193

[Close]
BLAST of Csa3G233990 vs. TAIR10
Match: AT2G04050.1 (AT2G04050.1 MATE efflux family protein)

HSP 1 Score: 104.8 bits (260), Expect = 4.2e-23
Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 1 

Query: 13  GLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEI 72
           GL+GALETLCGQA+G K Y K+  Y   +        +++SVLWIY E++L+ L Q+P+I
Sbjct: 84  GLAGALETLCGQAYGAKQYEKIGTYTYSATASNIPICVLISVLWIYIEKLLISLGQDPDI 143

Query: 73  SRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           SR++  Y  +LIP LFA+     + RFL  Q +V+PL+  +   +L HIP+ +  V+
Sbjct: 144 SRVAGSYALWLIPALFAHAFFIPLTRFLLAQGLVLPLLYCTLTTLLFHIPVCWAFVY 200

[Close]
BLAST of Csa3G233990 vs. NCBI nr
Match: gi|700202496|gb|KGN57629.1| (hypothetical protein Csa_3G233990 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 5.8e-67
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE 60
           MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE
Sbjct: 1   MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTE 60

Query: 61  QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH 120
           QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH
Sbjct: 61  QILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIH 120

Query: 121 IPIAYGLVH 130
           IPIAYGLVH
Sbjct: 121 IPIAYGLVH 129

[Close]
BLAST of Csa3G233990 vs. NCBI nr
Match: gi|659112022|ref|XP_008456028.1| (PREDICTED: MATE efflux family protein LAL5-like [Cucumis melo])

HSP 1 Score: 216.5 bits (550), Expect = 2.8e-53
Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQAFGRKFYGKM LYLQGSCI +FFCSIILSVLWIYTEQILVLL+QEP
Sbjct: 85  MTGLSGALETLCGQAFGRKFYGKMGLYLQGSCISSFFCSIILSVLWIYTEQILVLLHQEP 144

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           EISRISAMYMKFLIP LFAYGLLQNIMRFLQTQ VVMPLV FS VPM IHIPIAY LVH
Sbjct: 145 EISRISAMYMKFLIPGLFAYGLLQNIMRFLQTQSVVMPLVFFSAVPMFIHIPIAYALVH 203

[Close]
BLAST of Csa3G233990 vs. NCBI nr
Match: gi|657988067|ref|XP_008386196.1| (PREDICTED: MATE efflux family protein LAL5-like [Malus domestica])

HSP 1 Score: 169.1 bits (427), Expect = 5.1e-39
Identity = 79/119 (66.39%), Postives = 100/119 (84.03%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           + GLSGALETLCGQ FG K Y  + +YLQ SCI++FF   I+S++W YTE IL+LLYQ+P
Sbjct: 106 MVGLSGALETLCGQGFGAKLYKMLGIYLQASCIISFFFCFIISIIWFYTEPILILLYQDP 165

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           +IS+ +A++MKFLIP LFAYG LQNI+RF+QTQFVV+PL LFS VP++IH+ IAYGLVH
Sbjct: 166 QISKSAAVFMKFLIPGLFAYGFLQNILRFIQTQFVVLPL-LFSLVPVVIHVGIAYGLVH 223

[Close]
BLAST of Csa3G233990 vs. NCBI nr
Match: gi|694332461|ref|XP_009356867.1| (PREDICTED: MATE efflux family protein ALF5-like [Pyrus x bretschneideri])

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-39
Identity = 78/119 (65.55%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           + GLSGALETLCGQ FG KFY  + +YLQ S I++F  SII+SV+W YTE IL+L++Q+P
Sbjct: 93  MVGLSGALETLCGQGFGAKFYRMLGIYLQASSIISFLASIIVSVVWFYTEPILILIHQDP 152

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           +IS+ +A+YMKFLIP LFAYG L NI+RFLQTQ VVMPLV FS +P+++H+ IAYGLVH
Sbjct: 153 QISKYAALYMKFLIPGLFAYGFLPNILRFLQTQSVVMPLVYFSVIPVVLHVGIAYGLVH 211

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BLAST of Csa3G233990 vs. NCBI nr
Match: gi|763815122|gb|KJB81974.1| (hypothetical protein B456_013G170000 [Gossypium raimondii])

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-38
Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 1 

Query: 11  VTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEP 70
           +TGLSGALETLCGQ FG K Y  + +YLQ SCI++FF SII+SVLW +TE ILVLL+Q+P
Sbjct: 86  MTGLSGALETLCGQGFGAKMYKMLGIYLQASCIISFFFSIIISVLWSFTEPILVLLHQDP 145

Query: 71  EISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH 130
           EISR +A+YMK+LIP LFAYG LQNI+RFLQTQ +V+PLV+FS VP+ IH  I Y LV+
Sbjct: 146 EISRAAAVYMKYLIPGLFAYGFLQNILRFLQTQSIVIPLVVFSVVPLGIHFGIVYSLVN 204

The following BLAST results are available for this feature:
BLAST of Csa3G233990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DTX18_ARATH1.9e-3355.46Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1[more]
DTX19_ARATH1.1e-3052.94Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1[more]
DTX9_ARATH2.7e-2441.03Protein DETOXIFICATION 9 OS=Arabidopsis thaliana GN=DTX9 PE=2 SV=1[more]
DTX17_ARATH5.2e-2345.13Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1[more]
DTX3_ARATH7.5e-2242.74Protein DETOXIFICATION 3 OS=Arabidopsis thaliana GN=DTX3 PE=3 SV=1[more]
BLAST of Csa3G233990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9H5_CUCSA4.1e-67100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G233990 PE=4 SV=1[more]
A0A0D2VGN0_GOSRA8.0e-3968.07Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_013G170000 PE=3 SV=1[more]
U7DZI9_POPTR8.0e-3962.30Protein DETOXIFICATION OS=Populus trichocarpa GN=POPTR_0131s00220g PE=3 SV=1[more]
A0A0D2U2V2_GOSRA2.3e-3867.23Protein DETOXIFICATION OS=Gossypium raimondii GN=B456_013G169900 PE=3 SV=1[more]
A0A061F6P7_THECC2.3e-3865.55Protein DETOXIFICATION OS=Theobroma cacao GN=TCM_046871 PE=3 SV=1[more]
BLAST of Csa3G233990 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23550.11.1e-3455.46 MATE efflux family protein[more]
AT3G23560.16.5e-3252.94 MATE efflux family protein[more]
AT1G66760.21.5e-2541.03 MATE efflux family protein[more]
AT1G73700.12.9e-2445.13 MATE efflux family protein[more]
AT2G04050.14.2e-2342.74 MATE efflux family protein[more]
BLAST of Csa3G233990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202496|gb|KGN57629.1|5.8e-67100.00hypothetical protein Csa_3G233990 [Cucumis sativus][more]
gi|659112022|ref|XP_008456028.1|2.8e-5390.76PREDICTED: MATE efflux family protein LAL5-like [Cucumis melo][more]
gi|657988067|ref|XP_008386196.1|5.1e-3966.39PREDICTED: MATE efflux family protein LAL5-like [Malus domestica][more]
gi|694332461|ref|XP_009356867.1|6.7e-3965.55PREDICTED: MATE efflux family protein ALF5-like [Pyrus x bretschneideri][more]
gi|763815122|gb|KJB81974.1|1.1e-3868.07hypothetical protein B456_013G170000 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE_fam
Vocabulary: Biological Process
TermDefinition
GO:0006855drug transmembrane transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0015238drug transmembrane transporter activity
GO:0015297antiporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0015297 antiporter activity
molecular_function GO:0015238 drug transmembrane transporter activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU108561cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G233990.1Csa3G233990.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU108561CU108561transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002528Multi antimicrobial extrusion proteinPFAMPF01554MatEcoord: 6..125
score: 2.0
NoneNo IPR availablePANTHERPTHR11206MULTIDRUG RESISTANCE PROTEINcoord: 11..129
score: 5.6
NoneNo IPR availablePANTHERPTHR11206:SF78MATE EFFLUX FAMILY PROTEIN ALF5-RELATEDcoord: 11..129
score: 5.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G233990Cucurbita moschata (Rifu)cmocuB687
Csa3G233990Melon (DHL92) v3.5.1cumeB166
Csa3G233990Watermelon (Charleston Gray)cuwcgB230
Csa3G233990Watermelon (97103) v1cuwmB243
Csa3G233990Cucurbita pepo (Zucchini)cpecuB205
Csa3G233990Cucurbita pepo (Zucchini)cpecuB389
Csa3G233990Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G233990Cucumber (Gy14) v2cgybcuB109
Csa3G233990Melon (DHL92) v3.6.1cumedB238
Csa3G233990Silver-seed gourdcarcuB0043
Csa3G233990Silver-seed gourdcarcuB0675
Csa3G233990Watermelon (97103) v2cuwmbB215
Csa3G233990Wax gourdcuwgoB283
Csa3G233990Cucumber (Gy14) v1cgycuB003
Csa3G233990Cucurbita maxima (Rimu)cmacuB320
Csa3G233990Cucurbita maxima (Rimu)cmacuB697
Csa3G233990Cucurbita moschata (Rifu)cmocuB307