Csa3G229390 (gene) Cucumber (Chinese Long) v2

NameCsa3G229390
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14987499 .. 14987796 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTGCTCCTTGGCAACAGGCGAAACTCTTCTTCCTCCTCCTCGGCTCTCCCAGTTGGCCCATTCAATTTTTAGAAAGAAAGCTCCCTTTGTTCCTCGGCTCTCCCAGTTGGCCCATCCATTTTTTAGAAAGAAAGAATTGGAGCTTCATTCACCATTCAGTGTAAGCAGCAAAGATTTCGAAGGTTCTCCGATTGATCATGAAATGTTCACACACGAAGATATTAAAGGCACAGACTTTCAGGCTCTAGTCACTTTTCCGTTCAATAATCGGTTGCAATGGACTTTTGTATAG

mRNA sequence

ATGGCATTGCTCCTTGGCAACAGGCGAAACTCTTCTTCCTCCTCCTCGGCTCTCCCATTGGCCCATCCATTTTTTAGAAAGAAAGAATTGGAGCTTCATTCACCATTCAGTGTAAGCAGCAAAGATTTCGAAGGTTCTCCGATTGATCATGAAATGTTCACACACGAAGATATTAAAGGCACAGACTTTCAGGCTCTAGTCACTTTTCCGTTCAATAATCGGTTGCAATGGACTTTTGTATAG

Coding sequence (CDS)

ATGGCATTGCTCCTTGGCAACAGGCGAAACTCTTCTTCCTCCTCCTCGGCTCTCCCATTGGCCCATCCATTTTTTAGAAAGAAAGAATTGGAGCTTCATTCACCATTCAGTGTAAGCAGCAAAGATTTCGAAGGTTCTCCGATTGATCATGAAATGTTCACACACGAAGATATTAAAGGCACAGACTTTCAGGCTCTAGTCACTTTTCCGTTCAATAATCGGTTGCAATGGACTTTTGTATAG

Protein sequence

MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKGTDFQALVTFPFNNRLQWTFV*
BLAST of Csa3G229390 vs. TrEMBL
Match: A0A0A0L774_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229390 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG 60
          MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG
Sbjct: 1  MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG 60

Query: 61 TDFQALVTFPFNNRLQWTFV 81
          TDFQALVTFPFNNRLQWTFV
Sbjct: 61 TDFQALVTFPFNNRLQWTFV 80

BLAST of Csa3G229390 vs. NCBI nr
Match: gi|700202480|gb|KGN57613.1| (hypothetical protein Csa_3G229390 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 2.7e-38
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 1

Query: 1  MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG 60
          MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG
Sbjct: 1  MALLLGNRRNSSSSSSALPLAHPFFRKKELELHSPFSVSSKDFEGSPIDHEMFTHEDIKG 60

Query: 61 TDFQALVTFPFNNRLQWTFV 81
          TDFQALVTFPFNNRLQWTFV
Sbjct: 61 TDFQALVTFPFNNRLQWTFV 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L774_CUCSA1.9e-38100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229390 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202480|gb|KGN57613.1|2.7e-38100.00hypothetical protein Csa_3G229390 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU091730cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G229390.1Csa3G229390.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU091730CU091730transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G229390CsGy3G019180Cucumber (Gy14) v2cgybcuB109
The following gene(s) are paralogous to this gene:

None