Csa3G229370 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G229370
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	60S ribosomal protein L7, putative; contains IPR012988 (Ribosomal protein L30, N-terminal), IPR016082 (Ribosomal protein L30, ferredoxin-like fold domain)
Location	Chr3 : 14965398 .. 14969360 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCTTCAAAGGTCCATTATTCCCACAGCTGCTCTCTATTCGATTGTAATTGACTCTATTTGAGCTTCTGGAAGTAAATTTCATTAAAACAATTTGGAGTTCTATGGATATAGGATGGGAATCAGTGGAATCTTAAGGCGCTTCCGGAGGCATTCTTACCCTATGGGATAAAAGTAAAATCACAGTGGTGGAAACCATAAGAGGACGTTATTCCCTCTCAACAAAATGTGTAACTTTGTGCAAGAAGTGTTGTTGGGTTACCAATGTTTATGGTCCGTGTGGTTATAGAGAGAGGTAATTTGTTTGGCCAGAATTATTAACAATTACAGAATGTGGAGAAGAGGCTTGGTGTTTGGGTGGAGATTTTAATATCACTAGATGGGTCTATGAGAGGTTTGCCAGTTGGCAGAAGCACAAGAGGGATGAGACAGTTTAATTCCTTTATAGAATCTGCCAATATAATGGAAATTCCCCTTCAAATTGGCAAATTTACTTGGTCAAGAGAGGGTGGCACTGCGGCAAGATCTCTGTTGAACAGATTTTTTATTAACAGTAAATGGGATGGTGAATTTGAAAACTCAAGAGTGACCCGTAAAGCAAGAACTTTCTCCAATCACTTTCCTTTATTTTTAGAGGTAGGTGCAATACTATGGGGGCCATACCCATTCAGATTTTGCAATAGTTGGTCGTTGATAAAAGAGTGCAACAAGGTTATTGAGGAAGTCTTGAAAATCGCCCCCCTAGGCATTGGGTGGGCTGGTTTCATTCTTCATAAGCAGCTTCGTAAAGTGAAACTTGCTGTTAAAAATTGGCATGCTACTCATTTGATTGATATAAAGCAAAAAGAGGAAAGGCTTTTGAGAGAGTTAGAAATCATTGATGGTCTTGCAGAAAGTGTTGGTCTGAATGAAGTGGAATTGGCTCACAAATCAGATATACAAACTGAGTTGCTTTGCTTATATGTATTTCTGCCGTTATGTTTTTATTTTTCAGCCTTGCTTTTGTCTATCGTAGGTAGCTTCTATTGTTATTTTGGTTGTTCCTTTGGTCTTTTCATGACCTTTGTATGTTTATTGTACTTTGGTCTTTTCTTTGTATTTTGGATATGATGAGGGTGCTATCTACTTATCCTATCTGTCGCTCTCTCTCTCCCACATTTCTTGGCTTCCCTATTATTCTCATTGTATAGCTCTCTTGTACATTTTTTTTTGAAACAGAGACAAGCTTCTTTGTTAATAAAGGAAAATGAGGATGGTTATCTCTCTTCTCTTTCCTCTCTCCTCTCACCCACCCTCTTCTCCCTCGACTCCGGCCACAGCTTTCCGATCACGTCTCCCCCCATCTCACTAAGCGGTCACGTCGTCTCCCCTCTCTTCGGCATCATCAACCTTGGGGAGTCAAAACTCCATTTTTTCCAGCAATGGAAGTTAAAAGCTGCAAGATTGTAAACTATTTCTACTGTATTTGGTTCGAAAAGGGGAGGTTCCATATTGAAGATGTAGACTTCCAAAAAATTCTCACCTTATCCAAGTCCAATTGGAATGGTTCATTGTTTCAACATCGGCACTAGTCAAAGAACCTGATTGGAAGTTCTTTAGCAAATTTGGGAGGGATGAAACTGGTTTTACAAAACTATCCAAATTCCGAACCCCATCAGGTTGGTTCCTGAGATGAAGTTCTTCTGGAATACAATCTTTCATTCACATCTACTCAGGAGAAGTTCGGAAAGGTTGGATATCCTTCCTCAATATGATCAGGTCTTTTTTGTTGACTCATAATTACACCTACTGGCATTCCACTCTCCATTTAGAAGTCGGTCATTCAAGTCAGAAAGTTCCCTATCTCCCACAGACAGGATTAAGCTACGCAGACAAAGTGAAGCATTTAAAAACAAAAAATTTACACTCTGTTTTCTGCTCAGAAAAACAGAGCATGGCTTCTTGTCCCAAAAACCCAATTCATTCATTTAAGAAAAAAAAATTGTGAAGCAACCAGAGGAAAAATTCTGGGTGAGGAAAAATGAAGATATTTTAGAGGAAGATTGGCCTTATTTATCAAAAAAACCTTTTCTAATTTGATGATTGGAAGGACATTAAGTTATACCTAGAGGATCTCTTTCCAGTCAAAATCAGTATTAACCCTTTATATGCGGACAAAGCCATCATGAAAGTTACTCAAGGAAAGCTTGATGATTTAATTTATGCTCAAGACAAATGGTTCAATTATGGAAAATTTCATTTGTTATTTGAAAAACGGAATGAAGCCAAACACAGCAGACCAACTCTTATTGAAGGTTTCAGAGGATGGTTGTCAATAAAAAAAATCTTCCTGTTGGAATTCTTTCCTTTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGTTGTCTCTCTTTTCAATACTTCCTCTCAATTTATGGCGAATAAATATCTTTGAAGCAATTGGAGCACACTTTGGTGAACAAGTATAGCCTTAGAAACTCTCAATCTAATCAAGTGCTCTCAAGCAAGAATTAAAGTTCGGAAAAATCTTTGTGGATTCTTACCAGCAACTATAGAATTAAAGAGTGAGAACCGAGGAAATTTTTTCCTTAATTTTGGGGACTTTGAACCCTTAGAAGCTCCTGTAATAGTCCAATCTGATCTATTTCAAAGTGATTTTTCCAATCCTATTGATTTATGTAGAATTAATTCAGTGATTTTAGATGAAGAGCTCCAAGGTGATGGCCTCTCAGATACCTGGATTTTTCTCAAACAGAATGCCCCATCCATCTCAAGAAATCCTTTCGAAGCACTTAGGAAGAGAGGCTGTCTCATTATTATTATATTTATATTAATAGAGAGGCTGTCTCAATTTGTTTCGCACTTCGCATTCCTTCGTCTTCGGAGCCAGTCCTTTGTCTTCGTCGTTCGTCAATTCTTCATCCGTCTTCCTCCTACACGAGTTCACGTGGGTTCGTTCACGTGGGTTCCTTCTCCATTCTCCATTCTCCGTTCTCCGTTCGTCGCCATTCGCCATTCTCCGTTCTCAGTGGGTTCGTTCGCTGCAAAATTTTCAAGCCAGGTCATCTCGATTCTCATCGTGGATCTTCTCTTTCTCTTCTTGGATCGAAATAGCGGGTGAGTTACTATGGCTATGGCAGAAGAGGATCCTAAGCCACTTGCATATATATCGGAGATTATACTGAAAAAAAAAAAGAAAGGTAAATGAAGCAGCGACATTGAGAAGAAAGGAGCAGTTGGAGTTGAGGAAGCTTAGTTGGAAGAAAAACAAGGATGGTTTTATTAAACTGCCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGAACTGGACCTTGTCAACATGAAGCACAGGACAAAGAGAAAAAGATTTGTTATTGTGCCATCAAAATCTAAATTGATTTTTATAATTCAGATACAGGGAAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAAAGGGTGGGGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTTGTATATAAAAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGATAACAACATTATTGAACAGGCATTGGCAAGCATGGTATCGTGTGCGTGGAAGATATGGTGCATGAAATCGCTAATGTTGGCCATCATTTTAAGGAGGTAATTTCCTTTTTATGGCCCTTTGAACTTGAAAAGCCAGGAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATGCTGGTAATAGAGAAGATGACATCAACGATCTGATTAATGAGATAAATTAG

mRNA sequence

ATGCATGCTTCAAAGTCCTTTGTCTTCGTCGTTCGTCAATTCTTCATCCGTCTTCCTCCTACACGAGTTCACGTGGGTTCGTTCACGTGGGTTCCTTCTCCATTCTCCATTCTCCGTTCTCCGTTCGTCGCCATTCGCCATTCTCCGTTCTCAGTGGGTTCGTTCGCTGCAAAATTTTCAAGCCAGGTCATCTCGATTCTCATCGTGGATCTTCTCTTTCTCTTCTTGGATCGAAATAGCGGAAAGGTAAATGAAGCAGCGACATTGAGAAGAAAGGAGCAGTTGGAGTTGAGGAAGCTTAGTTGGAAGAAAAACAAGGATGGTTTTATTAAACTGCCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGAACTGGACCTTGTCAACATGAAGCACAGGACAAAGAGAAAAAGATTTGTTATTGTGCCATCAAAATCTAAATTGATTTTTATAATTCAGATACAGGGAAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAAAGGGTGGGGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTTGTATATAAAAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGATAACAACATTATTGAACAGGCATTGGCAAGCATGCCAGGAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATGCTGGTAATAGAGAAGATGACATCAACGATCTGATTAATGAGATAAATTAG

Coding sequence (CDS)

ATGCATGCTTCAAAGTCCTTTGTCTTCGTCGTTCGTCAATTCTTCATCCGTCTTCCTCCTACACGAGTTCACGTGGGTTCGTTCACGTGGGTTCCTTCTCCATTCTCCATTCTCCGTTCTCCGTTCGTCGCCATTCGCCATTCTCCGTTCTCAGTGGGTTCGTTCGCTGCAAAATTTTCAAGCCAGGTCATCTCGATTCTCATCGTGGATCTTCTCTTTCTCTTCTTGGATCGAAATAGCGGAAAGGTAAATGAAGCAGCGACATTGAGAAGAAAGGAGCAGTTGGAGTTGAGGAAGCTTAGTTGGAAGAAAAACAAGGATGGTTTTATTAAACTGCCTGAGGAATTTGTCAGAGAATATCGTGCTAGGGAACTGGACCTTGTCAACATGAAGCACAGGACAAAGAGAAAAAGATTTGTTATTGTGCCATCAAAATCTAAATTGATTTTTATAATTCAGATACAGGGAAAGAACGACATGCATCCAAAGACAAGGAAGATCTTATATAGTCTCGGATTAAGTAGAATTTTCAGCGCAGTTTTTGCCAAGGCTAATGAGAGTATTCTAGGGAAGCTACAAAGGGTGGGGCCATATGTGACATATGGATACCCTAATCTTAAAAATGTGAGGGAGCTTGTATATAAAAAGGGATTTGCAAAGATAGACAAACAAAGAGTTCCTCTAACTGATAACAACATTATTGAACAGGCATTGGCAAGCATGCCAGGAGGAGGGGGCTGCCTTCAAGGGAAAAAGTCATCGTACAAGGAAGGTGGAGATGCTGGTAATAGAGAAGATGACATCAACGATCTGATTAATGAGATAAATTAG

Protein sequence

MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFSSQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN*

Homology

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BLAST of Csa3G229370 vs. Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 8.4e-47
Identity = 106/218 (48.62%), Postives = 131/218 (60.09%), Query Frame = 1


Query: 91  RKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVIVPSKSKLIF 150
           RK+QLEL     KK K   IK PE+FV E+RA+E+D++ MK R KR +    P KS L+F
Sbjct: 30  RKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVF 89

Query: 151 IIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTYGYPNLKNVR 210
           II+IQGKNDMHPKT++IL +L L  +F+ VFAKA +S+  KL +V PYVTYGYPN K+V+
Sbjct: 90  IIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVK 149

Query: 211 ELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGG------------------------ 270
           +L+YKKG   I+   VPLTDNNIIEQAL      G                         
Sbjct: 150 DLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPL 209

Query: 271 --------CLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                    L  KK  + EGGD GNRED INDLI+++N
Sbjct: 210 KLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247

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BLAST of Csa3G229370 vs. Swiss-Prot
Match: RL72_ARATH (60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-38
Identity = 90/228 (39.47%), Postives = 131/228 (57.46%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K  E   L +K+ +E  K    +N+    K  E++ +EY  +E +L+++K   K K    
Sbjct: 17  KREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFY 76

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           V  ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTY
Sbjct: 77  VDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTY 136

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQAL----------------------- 261
           G+PNLK+V+EL+YK+G+ K++ QR+ LTDN+I+EQAL                       
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFK 196

Query: 262 ----------ASMPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                        P GG  L+ K++ Y EGGDAGNRE+ IN+LI  +N
Sbjct: 197 EANNFLWPFQLKAPLGG--LKKKRNHYVEGGDAGNRENFINELIRRMN 242

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BLAST of Csa3G229370 vs. Swiss-Prot
Match: RL73_ARATH (60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-36
Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 1


Query: 85  EAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVIVPS 144
           + A   +K+ +E RKL +K+         E++ +EY  ++ +L+ +K   K K    V  
Sbjct: 28  DEAVAAKKKSVEARKLIFKR--------AEQYAKEYAEKDNELIRLKREAKLKGGFYVDP 87

Query: 145 KSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTYGYP 204
           ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTYGYP
Sbjct: 88  EAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYP 147

Query: 205 NLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGC----------------- 264
           NLK+V+EL+YK+G+ K++ QR+ LTDN+I++QAL     G  C                 
Sbjct: 148 NLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGK--HGIICVEDLIHEIMTVGPHFKE 207

Query: 265 ----------------LQGKKSSYKEGGDAGNREDDINDLINEIN 277
                           L+ K++ Y EGGDAGNRE+ IN+L+  +N
Sbjct: 208 ANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 242

[Close]

BLAST of Csa3G229370 vs. Swiss-Prot
Match: RL74_ARATH (60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K  E   L +K++LE  K    + +       +++ +EY+ +E +L+ +K   K K    
Sbjct: 19  KREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFY 78

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           V  ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTY
Sbjct: 79  VDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTY 138

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGCLQG----------- 261
           GYPNLK+V+EL+YK+GF K++ QR  LTDN+I++Q L     G  C++            
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGK--HGIICVEDLIHEIMTVGPH 198

Query: 262 ----------------------KKSSYKEGGDAGNREDDINDLINEIN 277
                                 K++ Y EGGDAGNRE+ IN+L+  +N
Sbjct: 199 FKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

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BLAST of Csa3G229370 vs. Swiss-Prot
Match: RL7A_SCHPO (60S ribosomal protein L7-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rlp7 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.8e-32
Identity = 72/157 (45.86%), Postives = 99/157 (63.06%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           KVNE     R EQ   +K + KKN+    K  E F+  YR RE + + +    K K  + 
Sbjct: 23  KVNERTRKERVEQAIAKKEAQKKNRKETFKRAETFINNYRQRERERIRLNRSAKNKGDIF 82

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           VP ++KL+F+I+I G  +M PK RK+L  L LSRI +AVF + N+++   L+ V PYV Y
Sbjct: 83  VPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMY 142

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQAL 239
           G PNL +VREL+YK+GF KI+ QR+ L+DN +IE+AL
Sbjct: 143 GIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEAL 179

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BLAST of Csa3G229370 vs. TrEMBL
Match: A0A0A0LC45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229370 PE=4 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 1.3e-152
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1


Query: 1   MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS 60
           MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS
Sbjct: 1   MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS 60

Query: 61  SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY 120
           SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY
Sbjct: 61  SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY 120

Query: 121 RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV 180
           RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV
Sbjct: 121 RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV 180

Query: 181 FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS 240
           FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS
Sbjct: 181 FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS 240

Query: 241 MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 277
           MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN
Sbjct: 241 MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 276

[Close]

BLAST of Csa3G229370 vs. TrEMBL
Match: A0A061FT16_THECC (Ribosomal protein L30/L7 family protein isoform 1 OS=Theobroma cacao GN=TCM_045247 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 9.0e-56
Identity = 120/232 (51.72%), Postives = 153/232 (65.95%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKD----GFIKLPEEFVREYRARELDLVNMKHRTKRK 141
           K+ +   + RK QLEL K   KK+K       IK PE+F++E+RA+ELDL+ +K R KR 
Sbjct: 21  KIKDELAITRKTQLELGKYGAKKSKKQSDVSDIKRPEQFIKEFRAQELDLIRLKQRAKRP 80

Query: 142 RFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGP 201
           + +I   +SKL+F+I+IQGKNDMHPKTRKILY+L L R+FS +F KA E ++  LQ+V P
Sbjct: 81  KSMISKPRSKLLFVIRIQGKNDMHPKTRKILYNLRLRRVFSGIFVKATEGVIEMLQKVEP 140

Query: 202 YVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGCL--------- 261
           YVTYGYPNLKNV+EL+YKKG+A+IDK+ VPLTDNNIIEQ L     G  CL         
Sbjct: 141 YVTYGYPNLKNVKELIYKKGYARIDKKAVPLTDNNIIEQELGKY--GIICLEDIVHEIAN 200

Query: 262 ------------------------QGKKSSYKEGGDAGNREDDINDLINEIN 277
                                   QGKK  Y+EGGDAGNRED+INDLI+++N
Sbjct: 201 VGPHFKEVNHFMGPLMLSKPGGVIQGKKQPYREGGDAGNREDEINDLISKMN 250

[Close]

BLAST of Csa3G229370 vs. TrEMBL
Match: W9QQ55_9ROSA (60S ribosomal protein L7-1 OS=Morus notabilis GN=L484_013497 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 7.6e-55
Identity = 128/248 (51.61%), Postives = 149/248 (60.08%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K NE   LRRK+QLE RK   KKN   FI+ PEEFV+EYR RE+DLV MK R KRKR  +
Sbjct: 21  KSNEEVALRRKQQLEQRKFGNKKNMQEFIRKPEEFVKEYRYREVDLVRMKRRMKRKRTEL 80

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           V  KSKL+FI++IQGKNDMHP  RK LY+L L ++FSAVF   N  IL KLQ+V PYVTY
Sbjct: 81  VEPKSKLLFIVRIQGKNDMHPAVRKTLYNLRLRKVFSAVFVTVNAGILEKLQKVEPYVTY 140

Query: 202 G---------------------YPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS 261
           G                     YPNLKNV+EL+YKKGFA +DKQ VPLTDNNIIEQ L  
Sbjct: 141 GLIFRYVCRSLGACGSCKRDRWYPNLKNVKELIYKKGFANVDKQMVPLTDNNIIEQELGK 200

Query: 262 MPGGGGC--------------------------------LQGKKSSYKEGGDAGNREDDI 277
              G  C                                L+G K+ YK GG+AGNRED I
Sbjct: 201 Y--GILCIEDVVHEVANVGPHFKEVTHFLWPFLLNKPKGLKGSKTVYKLGGEAGNREDHI 260

[Close]

BLAST of Csa3G229370 vs. TrEMBL
Match: D7U871_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0070g00130 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-54
Identity = 120/228 (52.63%), Postives = 148/228 (64.91%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K NE   ++R++QLE R L  K+NK   +K  E++++EYR RELDL+ MKHR K+++  +
Sbjct: 21  KSNEEWAIKRRQQLEERNLRSKQNKAFNLKTAEQYIQEYRNRELDLIQMKHRGKKRKLSL 80

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
               SKL+F+I+IQGKNDMHPKTRKILY L L +IF  V  KANE IL  LQ+V PYV Y
Sbjct: 81  ETLDSKLLFVIRIQGKNDMHPKTRKILYFLRLRKIFDGVLVKANEGILEMLQKVEPYVAY 140

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGCL------------- 261
           GYPNLKNVREL+YKKGFAKI+ Q+VPLTDNNIIEQAL     G  C+             
Sbjct: 141 GYPNLKNVRELIYKKGFAKIEGQKVPLTDNNIIEQALGK--HGIMCIEDIVHEIANVGPH 200

Query: 262 --------------------QGKKSSYKEGGDAGNREDDINDLINEIN 277
                               QGKK  +KEGGDAGNR D IN+LI ++N
Sbjct: 201 FKEVNSFLWPFTLNKPEGGFQGKKKLFKEGGDAGNRGDKINELIGKMN 246

[Close]

BLAST of Csa3G229370 vs. TrEMBL
Match: A0A0D2V0D9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017500 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53
Identity = 119/233 (51.07%), Postives = 150/233 (64.38%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKD----GFIKLPEEFVREYRARELDLVNMKHRTKRK 141
           K+ +   + R+ QLEL K   KK+K       IK PE+ ++E+R +ELDL+  K R KR 
Sbjct: 22  KIRDELAITRRTQLELGKYGAKKSKKQSDVSDIKRPEQLIKEFRDKELDLIRTKQRAKRP 81

Query: 142 RFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGP 201
           + +I   KSKL+FII+IQGKNDMHPKTRKILY+L L ++FS VF KA E ++  LQ+V P
Sbjct: 82  KSMIPTIKSKLLFIIRIQGKNDMHPKTRKILYNLRLRKVFSGVFVKATEGVIDMLQKVEP 141

Query: 202 YVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGC---------- 261
           YVTYGYPNLKNV+ELVYKKG+A+IDK+ VPLTDNNIIEQ L     G  C          
Sbjct: 142 YVTYGYPNLKNVKELVYKKGYARIDKKAVPLTDNNIIEQTLGKY--GIICIEDIIHEIAN 201

Query: 262 ------------------------LQGKKSSYKEGGDAGNREDDINDLINEIN 277
                                   L+GKK  Y+EGGDAGNRED+INDLI+++N
Sbjct: 202 VGQHFKEVVLFMGPLMLSKPEDGLLRGKKQPYREGGDAGNREDEINDLISKMN 252

[Close]

BLAST of Csa3G229370 vs. TAIR10
Match: AT1G80750.1 (AT1G80750.1 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 188.7 bits (478), Expect = 4.7e-48
Identity = 106/218 (48.62%), Postives = 131/218 (60.09%), Query Frame = 1


Query: 91  RKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVIVPSKSKLIF 150
           RK+QLEL     KK K   IK PE+FV E+RA+E+D++ MK R KR +    P KS L+F
Sbjct: 30  RKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAKEVDMIRMKQRVKRPKSSPPPVKSDLVF 89

Query: 151 IIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTYGYPNLKNVR 210
           II+IQGKNDMHPKT++IL +L L  +F+ VFAKA +S+  KL +V PYVTYGYPN K+V+
Sbjct: 90  IIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVK 149

Query: 211 ELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGG------------------------ 270
           +L+YKKG   I+   VPLTDNNIIEQAL      G                         
Sbjct: 150 DLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPL 209

Query: 271 --------CLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                    L  KK  + EGGD GNRED INDLI+++N
Sbjct: 210 KLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247

[Close]

BLAST of Csa3G229370 vs. TAIR10
Match: AT2G01250.1 (AT2G01250.1 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 159.8 bits (403), Expect = 2.3e-39
Identity = 90/228 (39.47%), Postives = 131/228 (57.46%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K  E   L +K+ +E  K    +N+    K  E++ +EY  +E +L+++K   K K    
Sbjct: 17  KREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKELISLKREAKLKGGFY 76

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           V  ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTY
Sbjct: 77  VDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTY 136

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQAL----------------------- 261
           G+PNLK+V+EL+YK+G+ K++ QR+ LTDN+I+EQAL                       
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHFK 196

Query: 262 ----------ASMPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                        P GG  L+ K++ Y EGGDAGNRE+ IN+LI  +N
Sbjct: 197 EANNFLWPFQLKAPLGG--LKKKRNHYVEGGDAGNRENFINELIRRMN 242

[Close]

BLAST of Csa3G229370 vs. TAIR10
Match: AT2G44120.2 (AT2G44120.2 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 1


Query: 85  EAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVIVPS 144
           + A   +K+ +E RKL +K+         E++ +EY  ++ +L+ +K   K K    V  
Sbjct: 33  DEAVAAKKKSVEARKLIFKR--------AEQYAKEYAEKDNELIRLKREAKLKGGFYVDP 92

Query: 145 KSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTYGYP 204
           ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTYGYP
Sbjct: 93  EAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYP 152

Query: 205 NLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGC----------------- 264
           NLK+V+EL+YK+G+ K++ QR+ LTDN+I++QAL     G  C                 
Sbjct: 153 NLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGK--HGIICVEDLIHEIMTVGPHFKE 212

Query: 265 ----------------LQGKKSSYKEGGDAGNREDDINDLINEIN 277
                           L+ K++ Y EGGDAGNRE+ IN+L+  +N
Sbjct: 213 ANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRMN 247

[Close]

BLAST of Csa3G229370 vs. TAIR10
Match: AT3G13580.3 (AT3G13580.3 Ribosomal protein L30/L7 family protein)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36
Identity = 85/228 (37.28%), Postives = 127/228 (55.70%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K  E   L +K++LE  K    + +       +++ +EY+ +E +L+ +K   K K    
Sbjct: 19  KREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKERELIQLKREAKLKGGFY 78

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           V  ++KL+FII+I+G N + PKT+KIL  L L +IF+ VF K N++ +  L+RV PYVTY
Sbjct: 79  VDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTY 138

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGCLQG----------- 261
           GYPNLK+V+EL+YK+GF K++ QR  LTDN+I++Q L     G  C++            
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGK--HGIICVEDLIHEIMTVGPH 198

Query: 262 ----------------------KKSSYKEGGDAGNREDDINDLINEIN 277
                                 K++ Y EGGDAGNRE+ IN+L+  +N
Sbjct: 199 FKEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRMN 244

[Close]

BLAST of Csa3G229370 vs. NCBI nr
Match: gi|700202478|gb|KGN57611.1| (hypothetical protein Csa_3G229370 [Cucumis sativus])

HSP 1 Score: 547.0 bits (1408), Expect = 1.9e-152
Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 1


Query: 1   MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS 60
           MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS
Sbjct: 1   MHASKSFVFVVRQFFIRLPPTRVHVGSFTWVPSPFSILRSPFVAIRHSPFSVGSFAAKFS 60

Query: 61  SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY 120
           SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY
Sbjct: 61  SQVISILIVDLLFLFLDRNSGKVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREY 120

Query: 121 RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV 180
           RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV
Sbjct: 121 RARELDLVNMKHRTKRKRFVIVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAV 180

Query: 181 FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS 240
           FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS
Sbjct: 181 FAKANESILGKLQRVGPYVTYGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS 240

Query: 241 MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 277
           MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN
Sbjct: 241 MPGGGGCLQGKKSSYKEGGDAGNREDDINDLINEIN 276

[Close]

BLAST of Csa3G229370 vs. NCBI nr
Match: gi|659131342|ref|XP_008465636.1| (PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 3.7e-87
Identity = 177/228 (77.63%), Postives = 184/228 (80.70%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           KVNEAA LRRKEQLELRKLS KKNKDGFIKLPEEFVREYRARELDLV MKHRTKRKR  I
Sbjct: 23  KVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYRARELDLVKMKHRTKRKRSAI 82

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           VPSKS+LIFII+IQGKNDMHPKTRKILY+LGLSRIFSAVFAKANES+LGKLQRV PYVTY
Sbjct: 83  VPSKSQLIFIIRIQGKNDMHPKTRKILYNLGLSRIFSAVFAKANESVLGKLQRVEPYVTY 142

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALA------------SMPGGG---- 261
           GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQAL              +   G    
Sbjct: 143 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHGIVCVEDMVYEIANVGPHFK 202

Query: 262 -----------------GCLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                            GCLQGKKSSYK+GGDAGNREDDINDLINE+N
Sbjct: 203 EVISFLWPFELEKPGGGGCLQGKKSSYKDGGDAGNREDDINDLINEMN 250

[Close]

BLAST of Csa3G229370 vs. NCBI nr
Match: gi|778688195|ref|XP_011652694.1| (PREDICTED: 60S ribosomal protein L7-1 [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 7.0e-86
Identity = 177/227 (77.97%), Postives = 181/227 (79.74%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           KVNEAA LRRKEQLELRKLS KKNKDGFIKLPEEFVREYRARELDLV MKHR KRKR  I
Sbjct: 23  KVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVREYRARELDLVKMKHRIKRKRSAI 82

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
           VPS SKLIFII+IQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRV PYVTY
Sbjct: 83  VPSTSKLIFIIRIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVEPYVTY 142

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALA------------SMPGGGG--- 261
           GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQAL              +   G    
Sbjct: 143 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALGKHGIVCMEDMVHEIANVGPHFK 202

Query: 262 -----------------CLQGKKSSYKEGGDAGNREDDINDLINEIN 277
                            CLQGKKSSYKEGGD+GNREDDINDLINE+N
Sbjct: 203 EVISFLWPFELEKPGGRCLQGKKSSYKEGGDSGNREDDINDLINEMN 249

[Close]

BLAST of Csa3G229370 vs. NCBI nr
Match: gi|1009113143|ref|XP_015871925.1| (PREDICTED: 60S ribosomal protein L7-1 [Ziziphus jujuba])

HSP 1 Score: 240.4 bits (612), Expect = 3.9e-60
Identity = 130/229 (56.77%), Postives = 154/229 (67.25%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKR-FV 141
           K  E   LRRK+QLE RK  +KKNK   IK PEEF++E+R++ELDL+ +KHR KRKR   
Sbjct: 21  KSTEVLALRRKDQLEQRKFGYKKNKHESIKKPEEFIKEFRSKELDLIRLKHRVKRKRPAA 80

Query: 142 IVPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVT 201
           +V  KSKL+FII+IQGKNDMHP  RK LYSL L +IFSA F K N  ++ KLQRV PYVT
Sbjct: 81  LVTPKSKLLFIIRIQGKNDMHPAVRKTLYSLRLRKIFSAAFVKVNAGVIEKLQRVEPYVT 140

Query: 202 YGYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALASMPGGGGC------------- 261
           YGYPNLKNVREL+YKKG AKIDK+RVPLTDNNIIEQAL     G  C             
Sbjct: 141 YGYPNLKNVRELIYKKGHAKIDKRRVPLTDNNIIEQALGKY--GIICIEDMVNEIANVGP 200

Query: 262 --------------------LQGKKSSYKEGGDAGNREDDINDLINEIN 277
                               L+G K+ YKEGGD GNRED+IN+LI+++N
Sbjct: 201 HFKEVTAFLCPFILSKPEGVLRGSKTVYKEGGDTGNREDEINELISKMN 247

[Close]

BLAST of Csa3G229370 vs. NCBI nr
Match: gi|657953444|ref|XP_008362720.1| (PREDICTED: 60S ribosomal protein L7-1 [Malus domestica])

HSP 1 Score: 232.6 bits (592), Expect = 8.1e-58
Identity = 123/226 (54.42%), Postives = 155/226 (68.58%), Query Frame = 1


Query: 82  KVNEAATLRRKEQLELRKLSWKKNKDGFIKLPEEFVREYRARELDLVNMKHRTKRKRFVI 141
           K NE   LRRKEQLE RK   ++NK  +IK PE+F++EYR RE+DLV+MKHR KRKR  +
Sbjct: 21  KTNEELALRRKEQLEQRKFKSQQNKQEYIKKPEDFIKEYRYREMDLVHMKHRLKRKRPAL 80

Query: 142 VPSKSKLIFIIQIQGKNDMHPKTRKILYSLGLSRIFSAVFAKANESILGKLQRVGPYVTY 201
             + S+L+ +++IQGKNDMHP  RK LYSL L +IF+AVF KA ++IL KLQRV PYVTY
Sbjct: 81  ETANSQLLLVVRIQGKNDMHPVVRKALYSLKLRKIFNAVFVKATDAILEKLQRVQPYVTY 140

Query: 202 GYPNLKNVRELVYKKGFAKIDKQRVPLTDNNIIEQALAS-------------------MP 261
           GYPNLKNVREL+YKKGFAKIDK++VPLTDNN+IEQA+                       
Sbjct: 141 GYPNLKNVRELIYKKGFAKIDKKKVPLTDNNLIEQAMGQYDVICIEDIVHEIATIGPHFK 200

Query: 262 GGGGC------------LQGKKSSYKEGGDAGNREDDINDLINEIN 277
              G             L+G K+ YK+GGDAG+R D IN+LI+++N
Sbjct: 201 EVTGFLWPFVLNKPEAGLKGSKTVYKDGGDAGDRGDKINELISKMN 246

The following BLAST results are available for this feature:

BLAST of Csa3G229370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RL71_ARATH	8.4e-47	48.62	60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1	[more]
RL72_ARATH	4.2e-38	39.47	60S ribosomal protein L7-2 OS=Arabidopsis thaliana GN=RPL7B PE=2 SV=1	[more]
RL73_ARATH	8.7e-36	38.22	60S ribosomal protein L7-3 OS=Arabidopsis thaliana GN=RPL7C PE=2 SV=1	[more]
RL74_ARATH	1.9e-35	37.28	60S ribosomal protein L7-4 OS=Arabidopsis thaliana GN=RPL7D PE=2 SV=1	[more]
RL7A_SCHPO	5.8e-32	45.86	60S ribosomal protein L7-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843...	[more]

BLAST of Csa3G229370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC45_CUCSA	1.3e-152	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G229370 PE=4 SV=1	[more]
A0A061FT16_THECC	9.0e-56	51.72	Ribosomal protein L30/L7 family protein isoform 1 OS=Theobroma cacao GN=TCM_0452...	[more]
W9QQ55_9ROSA	7.6e-55	51.61	60S ribosomal protein L7-1 OS=Morus notabilis GN=L484_013497 PE=4 SV=1	[more]
D7U871_VITVI	2.2e-54	52.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0070g00130 PE=4 SV=...	[more]
A0A0D2V0D9_GOSRA	1.1e-53	51.07	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G017500 PE=3 SV=1	[more]

BLAST of Csa3G229370 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80750.1	4.7e-48	48.62	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	2.3e-39	39.47	Ribosomal protein L30/L7 family protein	[more]
AT2G44120.2	4.9e-37	38.22	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.3	1.1e-36	37.28	Ribosomal protein L30/L7 family protein	[more]

BLAST of Csa3G229370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202478\|gb\|KGN57611.1\|	1.9e-152	100.00	hypothetical protein Csa_3G229370 [Cucumis sativus]	[more]
gi\|659131342\|ref\|XP_008465636.1\|	3.7e-87	77.63	PREDICTED: 60S ribosomal protein L7-1 [Cucumis melo]	[more]
gi\|778688195\|ref\|XP_011652694.1\|	7.0e-86	77.97	PREDICTED: 60S ribosomal protein L7-1 [Cucumis sativus]	[more]
gi\|1009113143\|ref\|XP_015871925.1\|	3.9e-60	56.77	PREDICTED: 60S ribosomal protein L7-1 [Ziziphus jujuba]	[more]
gi\|657953444\|ref\|XP_008362720.1\|	8.1e-58	54.42	PREDICTED: 60S ribosomal protein L7-1 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016082	Ribosomal_L30_ferredoxin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0044444	cytoplasmic part
cellular_component	GO:0043232	intracellular non-membrane-bounded organelle
cellular_component	GO:0030529	intracellular ribonucleoprotein complex
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005829	cytosol
cellular_component	GO:0044446	intracellular organelle part
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU109024	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G229370.1	Csa3G229370.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU109024	CU109024	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	GENE3D	G3DSA:3.30.1390.20		coord: 148..204 score: 1.4E-23coord: 236..275 score: 1.4
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 149..199 score: 5.0
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	unknown	SSF55129	Ribosomal protein L30p/L7e	coord: 148..275 score: 1.31
None	No IPR available	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 82..276 score: 1.4
None	No IPR available	PANTHER	PTHR11524:SF11	60S RIBOSOMAL PROTEIN L7-1	coord: 82..276 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G229370	CSPI03G19230	Wild cucumber (PI 183967)	cpicuB120
Csa3G229370	Cucsa.032740	Cucumber (Gy14) v1	cgycuB003
Csa3G229370	CsGy3G019170	Cucumber (Gy14) v2	cgybcuB109

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G229370	Cucurbita maxima (Rimu)	cmacuB320
Csa3G229370	Cucurbita maxima (Rimu)	cmacuB697
Csa3G229370	Cucurbita moschata (Rifu)	cmocuB307
Csa3G229370	Cucurbita moschata (Rifu)	cmocuB687
Csa3G229370	Melon (DHL92) v3.5.1	cumeB166
Csa3G229370	Watermelon (Charleston Gray)	cuwcgB230
Csa3G229370	Watermelon (97103) v1	cuwmB243
Csa3G229370	Cucurbita pepo (Zucchini)	cpecuB205
Csa3G229370	Cucurbita pepo (Zucchini)	cpecuB389
Csa3G229370	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G229370	Melon (DHL92) v3.6.1	cumedB238
Csa3G229370	Silver-seed gourd	carcuB0043
Csa3G229370	Silver-seed gourd	carcuB0675
Csa3G229370	Watermelon (97103) v2	cuwmbB215
Csa3G229370	Wax gourd	cuwgoB283