Csa3G222800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G222800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionFerredoxin I; contains IPR010241 (Ferredoxin [2Fe-2S], plant), IPR012675 (Beta-grasp domain)
LocationChr3 : 14757266 .. 14758274 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGAAACCAAATCTTTGGAAGGATAAGAATCCACAACCATTACCATTCGTTGCCAAAAGATAAGGCGTTAACTCACATCCACACGCTCTCTATTTCACTCTCCACGTTATAGCCACACGACCCAAAAATCCTCTTTAAAAAACCCTCTCCACTCTCTCAATTCCATTTCATCTCATCTCATCTCCAATCCAACACAAGAACAATAAGAAAAATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAAAACAGAGGAACAAGAAGGGATTAAACTTATTTTTTCTTTTTATCTTTTCTATCTTTGTTGATGAGAGTAAGCATAATGGACATTGTTTTCTTAGCTTGATGATGATGATGATGATGATGATGATATCTCTCTTTTAAAGTGTTTGTTGAAAATTGTATTGTTCATTACTGGTTTAAGTTTATTTACAACTCGGGTTTTGTTTATCTGTTGTTGGGTTCTTAACTTTCATTTCTTTTTGGCTTCTTTACTTTCATGTGAATGATACTGTCTTTTAGCTTCACGTATATCACTTTAGCTCTCCATTGTAAATCATTTTGTTTATTGTTTTATTTATATGTTGTTGGGTGGTTGTTAT

mRNA sequence

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Coding sequence (CDS)

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Protein sequence

MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKEDSFAG*
Homology
[Close]
BLAST of Csa3G222800 vs. Swiss-Prot
Match: FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 3.2e-45
Identity = 94/146 (64.38%), Postives = 116/146 (79.45%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of Csa3G222800 vs. Swiss-Prot
Match: FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-44
Identity = 92/145 (63.45%), Postives = 112/145 (77.24%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSPAP-ISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of Csa3G222800 vs. Swiss-Prot
Match: FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.1e-40
Identity = 81/143 (56.64%), Postives = 104/143 (72.73%), Query Frame = 1 

Query: 6   AITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRLA-MKAYKVKLITPDGEK 65
           ++++   +TSF+ R P    S KP PN+GE+L+GLK   GG++  M +YKVKLITPDG  
Sbjct: 3   SVSATMISTSFMPRKPAV-TSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI 62

Query: 66  TVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWV 125
             +C  ++YILD AEE+G DLPYSCRAG+CSSC GK+  G +DQ+D +FLDD+Q+ EGWV
Sbjct: 63  EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWV 122

Query: 126 LTCVARPESDLVIETHKEDSFAG 147
           LTCVA P+SD+ IETHKE    G
Sbjct: 123 LTCVAYPQSDVTIETHKEAELVG 144

[Close]
BLAST of Csa3G222800 vs. Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.2e-38
Identity = 78/144 (54.17%), Postives = 102/144 (70.83%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH---RGGRLAMKAYKVKLIT 61
           ++T A++    +T+F  + P    +     N+G +L+GLK    RG   AM AYKV L+T
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPT--NVGRALFGLKSSASRGRVTAMAAYKVTLVT 62

Query: 62  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 121
           P+G++ +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKV SG ++Q D SFLDD+Q+
Sbjct: 63  PEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQI 122

Query: 122 AEGWVLTCVARPESDLVIETHKED 143
            EGWVLTCVA P  D+ IETHKE+
Sbjct: 123 KEGWVLTCVAYPTGDVTIETHKEE 144

[Close]
BLAST of Csa3G222800 vs. Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 2.9e-38
Identity = 79/142 (55.63%), Postives = 96/142 (67.61%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLITPD 62
           + T  T    AT+F+ +     +      N G SL+GLK   RGGR+ M AYKV L+TP 
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMTMAAYKVTLVTPT 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           G    +C  D+YILDAAEE G+DLPYSCRAG+CSSC GK+ +G L+Q DQSFLDD+Q+ E
Sbjct: 62  GNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTC A P SD+ IETHKE+
Sbjct: 122 GWVLTCAAYPVSDVTIETHKEE 143

[Close]
BLAST of Csa3G222800 vs. TrEMBL
Match: A0A0A0L764_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G222800 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 3.4e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of Csa3G222800 vs. TrEMBL
Match: A0A067L2U1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.9e-45
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPD 62
           ++TA++S   +TSF RR P    S +  PN+G++L+GLK  RGG+  AM +YKVKL+TP+
Sbjct: 2   ASTALSSAMVSTSFTRRQPV--TSLRALPNVGQALFGLKSSRGGKFKAMASYKVKLLTPE 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           GEK +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVV G++DQSD SFLDDEQ+ E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTCVA P SD+VIETHKE+
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEE 141

[Close]
BLAST of Csa3G222800 vs. TrEMBL
Match: A0A0G2UGP8_9ROSA (Leaf L-A-like ferredoxin OS=Pyrus betulifolia GN=FD1 PE=2 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 4.2e-44
Identity = 90/146 (61.64%), Postives = 115/146 (78.77%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRLAMKAYKVKLITPD 61
           ++  A++S   +TSFIR  P    S +  PN+G++L+GLK +RGGR+AM AYKVKLITP+
Sbjct: 4   TAAAALSSTMVSTSFIRGQPM--TSLRLSPNVGQALFGLKANRGGRVAMAAYKVKLITPE 63

Query: 62  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 121
           G +  EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDD+Q+  
Sbjct: 64  GPQEFECPEDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIGG 123

Query: 122 GWVLTCVARPESDLVIETHKEDSFAG 147
           G+VLTCVA P SD+ +ETHKE+   G
Sbjct: 124 GFVLTCVAYPSSDVTLETHKEEELTG 147

[Close]
BLAST of Csa3G222800 vs. TrEMBL
Match: A0A0B2PB52_GLYSO (Ferredoxin, chloroplastic OS=Glycine soja GN=glysoja_010835 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRLA-MKAYKVKLIT 60
           M++T A++    +TSF+RR P    S K FPN+GE+L+GLK  RGGR+  M +YKVKLIT
Sbjct: 1   MATTAALSGTMVSTSFMRRQPMTTTSLKTFPNVGEALFGLKSGRGGRVTCMASYKVKLIT 60

Query: 61  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 120
           P+GE   EC  D++I+D AE+ G++LPYSCRAG+C SCVGK+V G +DQSD SFLDDEQ+
Sbjct: 61  PEGEVEFECPDDVFIVDKAEDEGIELPYSCRAGSCVSCVGKIVEGNVDQSDGSFLDDEQI 120

Query: 121 AEGWVLTCVARPESDLVIETHKE 142
             GWVLTCVA+P SD+VIETHKE
Sbjct: 121 DSGWVLTCVAQPRSDVVIETHKE 143

[Close]
BLAST of Csa3G222800 vs. TrEMBL
Match: I1K498_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_05G168400 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43
Identity = 88/143 (61.54%), Postives = 112/143 (78.32%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRLA-MKAYKVKLIT 60
           M++T A++    +TSF+RR P    S K FPN+GE+L+GLK  RGGR+  M +YKVKLIT
Sbjct: 1   MATTAALSGTMVSTSFMRRQPMTTTSLKTFPNVGEALFGLKSGRGGRVTCMASYKVKLIT 60

Query: 61  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 120
           P+GE   EC  D++I+D AE+ G++LPYSCRAG+C SCVGK+V G +DQSD SFLDDEQ+
Sbjct: 61  PEGEVEFECPDDVFIVDKAEDEGIELPYSCRAGSCVSCVGKIVEGNVDQSDGSFLDDEQI 120

Query: 121 AEGWVLTCVARPESDLVIETHKE 142
             GWVLTCVA+P SD+VIETHKE
Sbjct: 121 DSGWVLTCVAQPRSDVVIETHKE 143

[Close]
BLAST of Csa3G222800 vs. TAIR10
Match: AT1G10960.1 (AT1G10960.1 ferredoxin 1)

HSP 1 Score: 182.6 bits (462), Expect = 1.8e-46
Identity = 94/146 (64.38%), Postives = 116/146 (79.45%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of Csa3G222800 vs. TAIR10
Match: AT1G60950.1 (AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 180.6 bits (457), Expect = 6.8e-46
Identity = 92/145 (63.45%), Postives = 112/145 (77.24%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSPAP-ISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of Csa3G222800 vs. TAIR10
Match: AT2G27510.1 (AT2G27510.1 ferredoxin 3)

HSP 1 Score: 131.3 bits (329), Expect = 4.7e-31
Identity = 66/108 (61.11%), Postives = 78/108 (72.22%), Query Frame = 1 

Query: 38  YGLK---HRGGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGAC 97
           +GLK   + GG      YKVKL+ PDG E   E   D YILDAAEE+G+DLPYSCRAGAC
Sbjct: 44  FGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGAC 103

Query: 98  SSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           S+C G++VSG +DQSD SFL+D  + +G+VLTCVA P+SD VI THKE
Sbjct: 104 STCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKE 151

[Close]
BLAST of Csa3G222800 vs. TAIR10
Match: AT5G10000.1 (AT5G10000.1 ferredoxin 4)

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-25
Identity = 52/99 (52.53%), Postives = 74/99 (74.75%), Query Frame = 1 

Query: 44  GGRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVS 103
           G   A ++ KVKLI+P+GE+  +E + D  IL++AE +GL+LPYSCR+G C +C GK+VS
Sbjct: 46  GKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVS 105

Query: 104 GKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           GK+DQS  SFL++EQ+ +G++LTC+A P  D V+ THK+
Sbjct: 106 GKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQ 144

[Close]
BLAST of Csa3G222800 vs. TAIR10
Match: AT4G14890.1 (AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 1 

Query: 45  GRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSG 104
           GR+  +AYKV ++  DG+ T +E + D  IL  A +SGLD+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 105 KLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKED 143
            +DQS    L D+ V  G+ L C + P SD  I+   E+
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEE 142

[Close]
BLAST of Csa3G222800 vs. NCBI nr
Match: gi|449457045|ref|XP_004146259.1| (PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 4.9e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of Csa3G222800 vs. NCBI nr
Match: gi|659112074|ref|XP_008456052.1| (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 259.2 bits (661), Expect = 4.3e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 1 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]
BLAST of Csa3G222800 vs. NCBI nr
Match: gi|802591910|ref|XP_012071291.1| (PREDICTED: ferredoxin-A-like [Jatropha curcas])

HSP 1 Score: 188.7 bits (478), Expect = 7.1e-45
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 1 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPD 62
           ++TA++S   +TSF RR P    S +  PN+G++L+GLK  RGG+  AM +YKVKL+TP+
Sbjct: 2   ASTALSSAMVSTSFTRRQPV--TSLRALPNVGQALFGLKSSRGGKFKAMASYKVKLLTPE 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           GEK +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVV G++DQSD SFLDDEQ+ E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTCVA P SD+VIETHKE+
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEE 141

[Close]
BLAST of Csa3G222800 vs. NCBI nr
Match: gi|694328938|ref|XP_009355250.1| (PREDICTED: ferredoxin, leaf L-A-like [Pyrus x bretschneideri])

HSP 1 Score: 185.7 bits (470), Expect = 6.0e-44
Identity = 90/146 (61.64%), Postives = 115/146 (78.77%), Query Frame = 1 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRLAMKAYKVKLITPD 61
           ++  A++S   +TSFIR  P    S +  PN+G++L+GLK +RGGR+AM AYKVKLITP+
Sbjct: 4   TAAAALSSTMVSTSFIRGQPM--TSLRLSPNVGQALFGLKANRGGRVAMAAYKVKLITPE 63

Query: 62  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 121
           G +  EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDD+Q+  
Sbjct: 64  GPQEFECPEDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDDQIGG 123

Query: 122 GWVLTCVARPESDLVIETHKEDSFAG 147
           G+VLTCVA P SD+ +ETHKE+   G
Sbjct: 124 GFVLTCVAYPSSDVTLETHKEEELTG 147

[Close]
BLAST of Csa3G222800 vs. NCBI nr
Match: gi|568833694|ref|XP_006471012.1| (PREDICTED: ferredoxin [Citrus sinensis])

HSP 1 Score: 184.5 bits (467), Expect = 1.3e-43
Identity = 92/142 (64.79%), Postives = 112/142 (78.87%), Query Frame = 1 

Query: 7   ITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRL-AMKAYKVKLITPDGEKT 66
           ++S   +TSFIR  PT   S K  PNMG++++GLK +RGGR+ AM  YKVKLITP GE+ 
Sbjct: 4   LSSAMVSTSFIRSKPTA-TSLKAMPNMGQAIFGLKANRGGRVVAMATYKVKLITPGGEEE 63

Query: 67  VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVL 126
           + C  D +ILDAAEE+GLDLPYSCRAGACSSC GKVVSG +DQS+QSFLDD+Q+ EG+VL
Sbjct: 64  INCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVL 123

Query: 127 TCVARPESDLVIETHKEDSFAG 147
           TC A P SD+ IETHKE+  AG
Sbjct: 124 TCAAYPTSDVTIETHKEEELAG 144

The following BLAST results are available for this feature:
BLAST of Csa3G222800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FER1_ARATH3.2e-4564.38Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1 SV=1[more]
FER2_ARATH1.2e-4463.45Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana GN=FD2 PE=1 SV=1[more]
FER_CAPAN3.1e-4056.64Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1[more]
FER1_MESCR2.2e-3854.17Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1[more]
FER1_SPIOL2.9e-3855.63Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2[more]
BLAST of Csa3G222800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L764_CUCSA3.4e-78100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G222800 PE=4 SV=1[more]
A0A067L2U1_JATCU4.9e-4564.79Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04972 PE=4 SV=1[more]
A0A0G2UGP8_9ROSA4.2e-4461.64Leaf L-A-like ferredoxin OS=Pyrus betulifolia GN=FD1 PE=2 SV=1[more]
A0A0B2PB52_GLYSO1.2e-4361.54Ferredoxin, chloroplastic OS=Glycine soja GN=glysoja_010835 PE=4 SV=1[more]
I1K498_SOYBN1.2e-4361.54Uncharacterized protein OS=Glycine max GN=GLYMA_05G168400 PE=4 SV=1[more]
BLAST of Csa3G222800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10960.11.8e-4664.38 ferredoxin 1[more]
AT1G60950.16.8e-4663.45 2Fe-2S ferredoxin-like superfamily protein[more]
AT2G27510.14.7e-3161.11 ferredoxin 3[more]
AT5G10000.15.1e-2552.53 ferredoxin 4[more]
AT4G14890.11.2e-1341.41 2Fe-2S ferredoxin-like superfamily protein[more]
BLAST of Csa3G222800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457045|ref|XP_004146259.1|4.9e-78100.00PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus][more]
gi|659112074|ref|XP_008456052.1|4.3e-6683.56PREDICTED: ferredoxin-like [Cucumis melo][more]
gi|802591910|ref|XP_012071291.1|7.1e-4564.79PREDICTED: ferredoxin-A-like [Jatropha curcas][more]
gi|694328938|ref|XP_009355250.1|6.0e-4461.64PREDICTED: ferredoxin, leaf L-A-like [Pyrus x bretschneideri][more]
gi|568833694|ref|XP_006471012.1|1.3e-4364.79PREDICTED: ferredoxin [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR0060582Fe2S_fd_BS
IPR010241Fd_pln
IPR012675Beta-grasp_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO:0051536iron-sulfur cluster binding
GO:00515372 iron, 2 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009767 photosynthetic electron transport chain
biological_process GO:0009639 response to red or far red light
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051536 iron-sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G222800.1Csa3G222800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU127662CU127662transcribed_cluster
CU144406CU144406transcribed_cluster
CU099704CU099704transcribed_cluster
CU103696CU103696transcribed_cluster
CU164163CU164163transcribed_cluster
CU088307CU088307transcribed_cluster
CU088833CU088833transcribed_cluster
CU132698CU132698transcribed_cluster
CU098919CU098919transcribed_cluster
CU167910CU167910transcribed_cluster
CU170760CU170760transcribed_cluster
CU155511CU155511transcribed_cluster
CU152638CU152638transcribed_cluster
CU154285CU154285transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 58..130
score: 5.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROFILEPS510852FE2S_FER_2coord: 52..142
score: 13
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainunknownSSF542922Fe-2S ferredoxin-likecoord: 48..143
score: 2.36
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 88..96
scor
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMsTIGR02008TIGR02008coord: 51..143
score: 7.2
IPR012675Beta-grasp domainGENE3DG3DSA:3.10.20.30coord: 48..143
score: 1.2
NoneNo IPR availablePANTHERPTHR19370NADH-CYTOCHROME B5 REDUCTASEcoord: 16..145
score: 5.9
NoneNo IPR availablePANTHERPTHR19370:SF120FERREDOXIN-1, CHLOROPLASTIC-RELATEDcoord: 16..145
score: 5.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G222800Cucumber (Gy14) v2cgybcuB109
Csa3G222800Melon (DHL92) v3.6.1cumedB238
Csa3G222800Silver-seed gourdcarcuB0043
Csa3G222800Silver-seed gourdcarcuB0675
Csa3G222800Watermelon (97103) v2cuwmbB215
Csa3G222800Wax gourdcuwgoB283
Csa3G222800Cucumber (Gy14) v1cgycuB003
Csa3G222800Cucurbita maxima (Rimu)cmacuB320
Csa3G222800Cucurbita maxima (Rimu)cmacuB697
Csa3G222800Cucurbita moschata (Rifu)cmocuB307
Csa3G222800Cucurbita moschata (Rifu)cmocuB687
Csa3G222800Melon (DHL92) v3.5.1cumeB166
Csa3G222800Watermelon (Charleston Gray)cuwcgB230
Csa3G222800Watermelon (97103) v1cuwmB243
Csa3G222800Cucurbita pepo (Zucchini)cpecuB205
Csa3G222800Cucurbita pepo (Zucchini)cpecuB389
Csa3G222800Bottle gourd (USVL1VR-Ls)culsiB211