Csa3G214040 (gene) Cucumber (Chinese Long) v2

NameCsa3G214040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14318183 .. 14318448 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGTACAGGAACGTAGGACATGATCAGTGGTACAAACCATGGTAATGGCAATGGCAACAAGGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

mRNA sequence

ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

Coding sequence (CDS)

ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

Protein sequence

MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEGGITVVAAK*
BLAST of Csa3G214040 vs. TrEMBL
Match: A0A0A0L9C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214040 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1

Query: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60
          MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG
Sbjct: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60

Query: 61 GITVVAAK 69
          GITVVAAK
Sbjct: 61 GITVVAAK 68

BLAST of Csa3G214040 vs. NCBI nr
Match: gi|700202431|gb|KGN57564.1| (hypothetical protein Csa_3G214040 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1

Query: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60
          MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG
Sbjct: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60

Query: 61 GITVVAAK 69
          GITVVAAK
Sbjct: 61 GITVVAAK 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L9C2_CUCSA2.8e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202431|gb|KGN57564.1|4.0e-30100.00hypothetical protein Csa_3G214040 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G214040.1Csa3G214040.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G214040CSPI03G18790Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None