Csa3G214040 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G214040
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 14318183 .. 14318448 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGTACAGGAACGTAGGACATGATCAGTGGTACAAACCATGGTAATGGCAATGGCAACAAGGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

mRNA sequence

ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

Coding sequence (CDS)

ATGGAGAAGGTGTTGGACACGATAAAAAAGATGGTTTTAAACTATGGATTGGCAGTCTCTTTGCAAAAGAAGAATGTTGCTGGAGTTAGCAAGTGGAAGTGGAAGCATCTTGCTAAGGAGGATGCAGGAAATAGAGAAGAAATGGAAAAGATAGGAAGAGGAACTTACTCCGATGAAGGAGGGATAACGGTGGTGGCAGCGAAGTAG

Protein sequence

MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEGGITVVAAK*
Homology
[Close]
BLAST of Csa3G214040 vs. TrEMBL
Match: A0A0A0L9C2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214040 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 2.8e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60
          MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG
Sbjct: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60

Query: 61 GITVVAAK 69
          GITVVAAK
Sbjct: 61 GITVVAAK 68

[Close]
BLAST of Csa3G214040 vs. NCBI nr
Match: gi|700202431|gb|KGN57564.1| (hypothetical protein Csa_3G214040 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-30
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60
          MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG
Sbjct: 1  MEKVLDTIKKMVLNYGLAVSLQKKNVAGVSKWKWKHLAKEDAGNREEMEKIGRGTYSDEG 60

Query: 61 GITVVAAK 69
          GITVVAAK
Sbjct: 61 GITVVAAK 68

The following BLAST results are available for this feature:
BLAST of Csa3G214040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9C2_CUCSA2.8e-30100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G214040 PE=4 SV=1[more]
BLAST of Csa3G214040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202431|gb|KGN57564.1|4.0e-30100.00hypothetical protein Csa_3G214040 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G214040.1Csa3G214040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G214040CSPI03G18790Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G214040Silver-seed gourdcarcuB0064
Csa3G214040Silver-seed gourdcarcuB0400
Csa3G214040Silver-seed gourdcarcuB0675
Csa3G214040Watermelon (97103) v2cuwmbB206
Csa3G214040Watermelon (97103) v2cuwmbB215
Csa3G214040Wax gourdcuwgoB280
Csa3G214040Wax gourdcuwgoB283
Csa3G214040Cucumber (Gy14) v1cgycuB029
Csa3G214040Cucurbita maxima (Rimu)cmacuB320
Csa3G214040Cucurbita maxima (Rimu)cmacuB331
Csa3G214040Cucurbita maxima (Rimu)cmacuB697
Csa3G214040Cucurbita maxima (Rimu)cmacuB705
Csa3G214040Cucurbita moschata (Rifu)cmocuB307
Csa3G214040Cucurbita moschata (Rifu)cmocuB320
Csa3G214040Cucurbita moschata (Rifu)cmocuB687
Csa3G214040Cucurbita moschata (Rifu)cmocuB696
Csa3G214040Melon (DHL92) v3.5.1cumeB163
Csa3G214040Melon (DHL92) v3.5.1cumeB166
Csa3G214040Watermelon (Charleston Gray)cuwcgB224
Csa3G214040Watermelon (Charleston Gray)cuwcgB230
Csa3G214040Watermelon (97103) v1cuwmB237
Csa3G214040Watermelon (97103) v1cuwmB243
Csa3G214040Cucurbita pepo (Zucchini)cpecuB205
Csa3G214040Cucurbita pepo (Zucchini)cpecuB217
Csa3G214040Cucurbita pepo (Zucchini)cpecuB389
Csa3G214040Cucurbita pepo (Zucchini)cpecuB395
Csa3G214040Bottle gourd (USVL1VR-Ls)culsiB202
Csa3G214040Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G214040Cucumber (Gy14) v2cgybcuB109
Csa3G214040Melon (DHL92) v3.6.1cumedB232
Csa3G214040Melon (DHL92) v3.6.1cumedB238