Csa3G211980 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATTAGGGCATTCTCTCCTCTTTTCCTTCTCCCTTTTCCTTTCTCTCGTCGCCTTGGTTCTCTTCTTGCTCGGTGTATTGTGTTTCCAGCCCTACAAATCCGCCATTCCCTGATTCCAATCTTCCTTCTCTGCACCGCGCCCCATCGCACATCTTCTCATTTTCTGGGTCTCCTTCGACCCTCCCCGGAGCTAGGGTTTCTAGACATTCCCAGAGGTTTAGGCACACCCATTTGGAGCATTGACGCATGCTTTTATCCTTTTATGGAAGCCACGGCCGCAGCGTGTGGTGCTTCTCTCACCATGCATTCTCCCCAGCTCTCCCGCGAATAATGGCGAGCCGTTGCTGACAATCACTCCGCCCGGGATGCCGCCGATGAAGTAGGGCTTCCCCCATTTTAAGGGTTTCTTTCTCGCATTGCTTTTTTTTTTTTTTTTCCGTTCACAAATCTGGATACATGGACAGCAGACTGTTACTATCGATCTTTTTGTTGACTTAATGATTTATAGGCAATTCAGGAAGGTGCTGACGTTGTGATTGTTGTACGAGGAGATGGAACTTTTCATGAGGTATGATACGACTCATTTCTATTAGTTCAGTTTTCAATGCTTGGCGCAGGCTTGGTTTTACCTTTTCTTTTTAGTCATCTTTGGTTTAAGCCAGTAAACCAAGCCAAACTGCTTGCACGCCCAAGTTGAATGATGTGATTGCTCGATTGGTATATGAACAGCATTTCTTTTTGTTTCTCTTGAACACCTCCAAACTTTTTGAAGCTATTGTTTGTATCTATCCATAGTTTTTGAGCTCTGAGATTTCAGTGGTAACATCTAACCATTAGTATAGCTTGAGTATGTCTTCTTCTTCTCCTACTTACTTGGTACTTAATAATGATTATTTACCAAGGTCTGTTTCTATAAAAGTAACTTTTAACTTGGCTTTGATTCAAGCAACCCTCTTGTATTGCCCATTAGATATAAGCAAGCATTTTACAACTTTTAATGAAATTTTCTAGGATTGATGTTTGGTTGTATACGTTTGACTTGATGCATGGGGGGATTTATCTGTTCTGATTGACGGGTGGTTAATGGCTTCTTTTGGGCTGGAAAGCCTATTGTTGTTAATAATGATGGAGAAGCATGCAAATCGACAACACTTGGTGTAAGAGATTCATTCATTGTTACTATCTTAAGTTACTTATTTCCATTATCTACTAGTTGTTGGTTTATCAGTCTGTAACTTGTTCAGATTATTTTCATGAATTTATGCTATTGAACTGTTGGCTTACATATATTGTTGTGCCTACTTGCAGATTATTCCCTGGGGGACAGGTTTGGATTTTGCAAGAACATTTGGTCGGTAAGTGCACATTACTACATTGTGTTTTTGTACGACGTGAGACTTTCAATTATCACTTCCTCCATGGGGTTAAGCAAACTTGGTTAACATTCTTTTAATTAGGAATAACAATCCGTTTGAAGCTGTGGATCGTATAGCCAAAGGTATCCTTGTTTCACTCCTCTAATTTTTCTGTCGATGAAGTACTGTAAATGGCTCTGTTTGTTCACACAAACATTGCACTACCATTGGTAGTTCATGTAAAATATTCTGCAGCGTTGAGGACCCGAATTGATGTTGGAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTGCAAATGTTGCAGACATTCATTTGTAAGGTTAAAACCCAAATATTCATTCGAGGTACTTGGATCCTCCCTTCTTCAGATCACAATCTCAAGCCCTAAAACCCAAATATTGCTTCTCTTCTCCATTCCCCTATTCCTCTATTTATAACCAAGTATAACCGACTCCCTAACTATTTATTGTTATGCCCTTAATACCCTAATAACCTCTAATACCGATCCTATCAGCCTCAAGGTGGTTTCAAAATGTAGACCATTTTGGAGGGGGCGGTGACTGCATTTTTACCATCTTTATTTAATTTCATCTATGTAGAATGCCATAACTCATAGGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTATAATTCGTTTCTGTGGGATTTTATTTGATCACTTTTTCCTTCCTTGTCTTCTTAACTATGTGATGCTTTTCTTTGCAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGGTTAGTCATCTCTTTAAAAATTATAATGTGCCTAGATTTTCCATTTTGTATTTCAATTTTCTCTCTCCAACGGTCTGTTTTATGTTGGAGACTTGTGGAAGCAGAGGTGAAGAAACTATAATTGAACTGGATTTGCATGGAGCATTGTGATTTTCATTTCTGTCAAGTTTTTGCTTGAGAAAAACTTACACTCAAACTTATATGGAGATGCTTTATTTACCTAGCAGAGAAGCCCTAAGAAAAGTAATATTGTTAAACCTTCTTACTTCTGGCATTCTGATGTATCCTCAACCAAAATTAGAAAGTTATATGATTATCCTTTTTTCCTTGTTAAATCTTTGTCAACGTTGATGAACTCAATTAATCGATATCAATGTAACTCATCCATGGTTGAACATATGATTGAGCATGATTTCACATTTCAGCTCCACCTCATTAAAATTCATTGTTTGGCAATGATGCCCTTTTCTCAATCAAAACTTCCTATTTCTGCTTCTGAGCTTGTTCGTCTGCAATGCAACTATCATCAGTTTATTGTTTTGTTGTTCATGCAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA ATGAAGATTAGGGCATTCTCTCCTCTTTTCCTTCTCCCTTTTCCTTTCTCTCGTCGCCTTGGTTCTCTTCTTGCTCGGTGTATTGTGTTTCCAGCCCTACAAATCCGCCATTCCCTGATTCCAATCTTCCTTCTCTGCACCGCGCCCCATCGCACATCTTCTCATTTTCTGGGTCTCCTTCGACCCTCCCCGGAGCTAGGGTTTCTAGACATTCCCAGAGGTTTAGGCACACCCATTTGGAGCATTGACGCATGCTTTTATCCTTTTATGGAAGCCACGGCCGCAGCGTGTGCCGTTGCTGACAATCACTCCGCCCGGGATGCCGCCGATGAAGCAATTCAGGAAGGTGCTGACGTTGTGATTGTTGTACGAGGAGATGGAACTTTTCATGAGATTATTCCCTGGGGGACAGGTTTGGATTTTGCAAGAACATTTGGTCGGAATAACAATCCGTTTGAAGCTGTGGATCGTATAGCCAAAGCGTTGAGGACCCGAATTGATGTTGGAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTGCAAATGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA ATGAAGATTAGGGCATTCTCTCCTCTTTTCCTTCTCCCTTTTCCTTTCTCTCGTCGCCTTGGTTCTCTTCTTGCTCGGTGTATTGTGTTTCCAGCCCTACAAATCCGCCATTCCCTGATTCCAATCTTCCTTCTCTGCACCGCGCCCCATCGCACATCTTCTCATTTTCTGGGTCTCCTTCGACCCTCCCCGGAGCTAGGGTTTCTAGACATTCCCAGAGGTTTAGGCACACCCATTTGGAGCATTGACGCATGCTTTTATCCTTTTATGGAAGCCACGGCCGCAGCGTGTGCCGTTGCTGACAATCACTCCGCCCGGGATGCCGCCGATGAAGCAATTCAGGAAGGTGCTGACGTTGTGATTGTTGTACGAGGAGATGGAACTTTTCATGAGATTATTCCCTGGGGGACAGGTTTGGATTTTGCAAGAACATTTGGTCGGAATAACAATCCGTTTGAAGCTGTGGATCGTATAGCCAAAGCGTTGAGGACCCGAATTGATGTTGGAGTTGTCAATGAAGATAATGGGGAGAATCATTACTTTGCAAATGTTGATTACGCTGAATGGGAGCTGTATCCACAAGTAACTGCTCTATGCATTGGAAATGCTAAATACTTTGGCGGTGGTATGAAAATTGTGCCAAATGCCGATCCTTCCAACAGGAGTCTAGAGGTAGTAATTCTTCAGGATTTCAAGTGGTATGACTTTATTCTGAATTTACACAAAATATACAATGGGACATATTTGACGGTGAAAAACGTAACATCAAGAAGCGTTCGTTCGATCGAAGTGGAAGAAGTTTCTTGCAGCGGCAGCATATATGTTCAATCTGATGGGGAACACTTGGGGTTTCTTCCAAGGAAATTCCATATTCTACCAGCTGCCATTGAAATGATATGCTGA MKIRAFSPLFLLPFPFSRRLGSLLARCIVFPALQIRHSLIPIFLLCTAPHRTSSHFLGLLRPSPELGFLDIPRGLGTPIWSIDACFYPFMEATAAACAVADNHSARDAADEAIQEGADVVIVVRGDGTFHEIIPWGTGLDFARTFGRNNNPFEAVDRIAKALRTRIDVGVVNEDNGENHYFANVDYAEWELYPQVTALCIGNAKYFGGGMKIVPNADPSNRSLEVVILQDFKWYDFILNLHKIYNGTYLTVKNVTSRSVRSIEVEEVSCSGSIYVQSDGEHLGFLPRKFHILPAAIEMIC*
BLAST of Csa3G211980 vs. Swiss-Prot
Match: LCKB2_ARATH (Sphingoid long-chain bases kinase 2, mitochondrial OS=Arabidopsis thaliana GN=LCKB2 PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 1.7e-48 Identity = 89/116 (76.72%), Postives = 103/116 (88.79%), Query Frame = 1
HSP 2 Score: 91.7 bits (226), Expect = 1.5e-17 Identity = 50/106 (47.17%), Postives = 61/106 (57.55%), Query Frame = 1
BLAST of Csa3G211980 vs. Swiss-Prot
Match: DAGK_MYCTO (Diacylglycerol kinase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=dagK PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13 Identity = 66/257 (25.68%), Postives = 100/257 (38.91%), Query Frame = 1
BLAST of Csa3G211980 vs. Swiss-Prot
Match: DAGK_MYCTU (Diacylglycerol kinase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=dagK PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13 Identity = 66/257 (25.68%), Postives = 100/257 (38.91%), Query Frame = 1
BLAST of Csa3G211980 vs. TrEMBL
Match: A0A0A0L9B2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G211980 PE=4 SV=1) HSP 1 Score: 615.5 bits (1586), Expect = 3.4e-173 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Csa3G211980 vs. TrEMBL
Match: A0A0A0K3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280850 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 1.5e-59 Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 1
BLAST of Csa3G211980 vs. TrEMBL
Match: A0A0A0K3Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G280850 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.2e-24 Identity = 63/80 (78.75%), Postives = 63/80 (78.75%), Query Frame = 1
HSP 2 Score: 238.0 bits (606), Expect = 1.5e-59 Identity = 135/265 (50.94%), Postives = 159/265 (60.00%), Query Frame = 1
BLAST of Csa3G211980 vs. TrEMBL
Match: A0A0A0KD28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006770 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.6e-58 Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 1
BLAST of Csa3G211980 vs. TrEMBL
Match: A0A0A0KD28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006770 PE=4 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.7e-04 Identity = 24/28 (85.71%), Postives = 24/28 (85.71%), Query Frame = 1
HSP 2 Score: 234.2 bits (596), Expect = 2.1e-58 Identity = 130/259 (50.19%), Postives = 162/259 (62.55%), Query Frame = 1
BLAST of Csa3G211980 vs. TAIR10
Match: AT2G46090.1 (AT2G46090.1 Diacylglycerol kinase family protein) HSP 1 Score: 194.5 bits (493), Expect = 9.3e-50 Identity = 89/116 (76.72%), Postives = 103/116 (88.79%), Query Frame = 1
HSP 2 Score: 91.7 bits (226), Expect = 8.5e-19 Identity = 50/106 (47.17%), Postives = 61/106 (57.55%), Query Frame = 1
BLAST of Csa3G211980 vs. NCBI nr
Match: gi|700202421|gb|KGN57554.1| (hypothetical protein Csa_3G211980 [Cucumis sativus]) HSP 1 Score: 615.5 bits (1586), Expect = 4.8e-173 Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 1
BLAST of Csa3G211980 vs. NCBI nr
Match: gi|778688574|ref|XP_011652782.1| (PREDICTED: uncharacterized protein LOC105435092 [Cucumis sativus]) HSP 1 Score: 371.7 bits (953), Expect = 1.2e-99 Identity = 190/224 (84.82%), Postives = 191/224 (85.27%), Query Frame = 1
BLAST of Csa3G211980 vs. NCBI nr
Match: gi|923623339|ref|XP_013748193.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial-like isoform X1 [Brassica napus]) HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59 Identity = 133/265 (50.19%), Postives = 159/265 (60.00%), Query Frame = 1
BLAST of Csa3G211980 vs. NCBI nr
Match: gi|922473169|ref|XP_013635676.1| (PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial isoform X1 [Brassica oleracea var. oleracea]) HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59 Identity = 133/265 (50.19%), Postives = 159/265 (60.00%), Query Frame = 1
BLAST of Csa3G211980 vs. NCBI nr
Match: gi|674958546|emb|CDX74790.1| (BnaA05g05360D [Brassica napus]) HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59 Identity = 135/265 (50.94%), Postives = 159/265 (60.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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