Csa3G202210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G202210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13846084 .. 13846314 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGATTCGTCGGTAATAAAAGGAGGTTTGGCGTTAGTGAGAACTTATGGGTTTCAGTTTGAGGTGTGCCATGAGAGGAAGAAGAAACTCGAAGCGAAAGGGTTTCAAGAAGGAATGAGGGTTGAGGTGAAATATTGGGTCGAGAGGATGAATTTAATGAAGTATTTAGAGAAAGGGATTAAGGATAGGTTTCAGATGGGCTGGGGCTTAAATTGGGTTGAGGGGTAG

mRNA sequence

ATGTTGGATTCGTCGGTAATAAAAGGAGGTTTGGCGTTAGTGAGAACTTATGGGTTTCAGTTTGAGGTGTGCCATGAGAGGAAGAAGAAACTCGAAGCGAAAGGGTTTCAAGAAGGAATGAGGGTTGAGGTGAAATATTGGGTCGAGAGGATGAATTTAATGAAGTATTTAGAGAAAGGGATTAAGGATAGGTTTCAGATGGGCTGGGGCTTAAATTGGGTTGAGGGGTAG

Coding sequence (CDS)

ATGTTGGATTCGTCGGTAATAAAAGGAGGTTTGGCGTTAGTGAGAACTTATGGGTTTCAGTTTGAGGTGTGCCATGAGAGGAAGAAGAAACTCGAAGCGAAAGGGTTTCAAGAAGGAATGAGGGTTGAGGTGAAATATTGGGTCGAGAGGATGAATTTAATGAAGTATTTAGAGAAAGGGATTAAGGATAGGTTTCAGATGGGCTGGGGCTTAAATTGGGTTGAGGGGTAG

Protein sequence

MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKGIKDRFQMGWGLNWVEG*
Homology
[Close]
BLAST of Csa3G202210 vs. TrEMBL
Match: A0A0A0LA87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202210 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 3.4e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG 60
          MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG
Sbjct: 1  MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG 60

Query: 61 IKDRFQMGWGLNWVEG 77
          IKDRFQMGWGLNWVEG
Sbjct: 61 IKDRFQMGWGLNWVEG 76

[Close]
BLAST of Csa3G202210 vs. NCBI nr
Match: gi|700202379|gb|KGN57512.1| (hypothetical protein Csa_3G202210 [Cucumis sativus])

HSP 1 Score: 161.8 bits (408), Expect = 4.9e-37
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 1  MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG 60
          MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG
Sbjct: 1  MLDSSVIKGGLALVRTYGFQFEVCHERKKKLEAKGFQEGMRVEVKYWVERMNLMKYLEKG 60

Query: 61 IKDRFQMGWGLNWVEG 77
          IKDRFQMGWGLNWVEG
Sbjct: 61 IKDRFQMGWGLNWVEG 76

The following BLAST results are available for this feature:
BLAST of Csa3G202210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA87_CUCSA3.4e-37100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G202210 PE=4 SV=1[more]
BLAST of Csa3G202210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202379|gb|KGN57512.1|4.9e-37100.00hypothetical protein Csa_3G202210 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G202210.1Csa3G202210.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G202210CSPI03G18290Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G202210Cucurbita pepo (Zucchini)cpecuB205
Csa3G202210Cucurbita pepo (Zucchini)cpecuB242
Csa3G202210Cucurbita pepo (Zucchini)cpecuB389
Csa3G202210Cucurbita pepo (Zucchini)cpecuB677
Csa3G202210Bottle gourd (USVL1VR-Ls)culsiB189
Csa3G202210Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G202210Cucumber (Gy14) v2cgybcuB109
Csa3G202210Cucumber (Gy14) v2cgybcuB307
Csa3G202210Melon (DHL92) v3.6.1cumedB181
Csa3G202210Melon (DHL92) v3.6.1cumedB238
Csa3G202210Melon (DHL92) v3.6.1cumedB255
Csa3G202210Silver-seed gourdcarcuB0232
Csa3G202210Silver-seed gourdcarcuB0320
Csa3G202210Silver-seed gourdcarcuB0400
Csa3G202210Watermelon (97103) v2cuwmbB198
Csa3G202210Watermelon (97103) v2cuwmbB215
Csa3G202210Wax gourdcuwgoB283
Csa3G202210Wax gourdcuwgoB308
Csa3G202210Cucumber (Chinese Long) v2cucuB129
Csa3G202210Cucumber (Gy14) v1cgycuB320
Csa3G202210Cucumber (Gy14) v1cgycuB350
Csa3G202210Cucurbita maxima (Rimu)cmacuB128
Csa3G202210Cucurbita maxima (Rimu)cmacuB320
Csa3G202210Cucurbita maxima (Rimu)cmacuB513
Csa3G202210Cucurbita maxima (Rimu)cmacuB697
Csa3G202210Cucurbita moschata (Rifu)cmocuB117
Csa3G202210Cucurbita moschata (Rifu)cmocuB307
Csa3G202210Cucurbita moschata (Rifu)cmocuB504
Csa3G202210Cucurbita moschata (Rifu)cmocuB687
Csa3G202210Melon (DHL92) v3.5.1cumeB166
Csa3G202210Melon (DHL92) v3.5.1cumeB195
Csa3G202210Melon (DHL92) v3.5.1cumeB265
Csa3G202210Watermelon (Charleston Gray)cuwcgB211
Csa3G202210Watermelon (Charleston Gray)cuwcgB215
Csa3G202210Watermelon (Charleston Gray)cuwcgB230
Csa3G202210Watermelon (97103) v1cuwmB243
Csa3G202210Watermelon (97103) v1cuwmB270