Csa3G197930 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G197930
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Autophagy protein 5; contains IPR007239 (Autophagy-related protein 5)
Location	Chr3 : 13516444 .. 13519970 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGGCGAGGAGAGGGAGGCCATACCGCCTTGCAAATACCCAAGGCGAGCACCTTCAATGATGAGAGGCGAGGAGGTTCTCGCCTTTCTTCTTTTTTATACCATTCTTCAAGTTTTTTGTTTTTCTTCAAATTTTCAAGAATGAAGGTTAGAAGAAAATGGAAGAAGTCATCTTTTTGCTTAGCCATCCATTGGTTGCTTATCAAAAATGATGGAAAGGAAGAAGATCGGTTGGAAATCAGAAAGGGAGAAGAGATGTTATGTTCTCTTTTTTAAAAGAAAAAAAATTCCTAGAAGAGAATTGAAGGGTTGGCTGCTGGAATTAAAGTAACGTTGGCTGCATGCTAACCGAACTGCCAAATGGCAAAATTTCTACCCCATTACTCAAAAAACTATTTTTTACCATTTAAAAAGGATTTTTGTTTCTATTTCTTTTGTCAAATATTTTTAGTTAATTTTTCTTAATAATTTTGACTTTTTAACATTTTTAAAATCTAAGTATTTTTTGTCTATAATTGTCAAAAATAATATTTATTCATTATTTTTTTAAGTGTGCCTTGCTTCAATCGGGAACGCTTTTTTGTTGCATCTTAGCTTAAGGTGATTATAGAGCGTGTCGCCTTAAAGTGCGCATTGTGCTTTGAAAACACTGTTTTCTCCTATCGTACCAAAGGAATAAGAAAAGTTTATCATGTAATTCTTTCTAACTAGGCATAAAAAATTGAGAAAGAAAATAAGAAAGCCACTCACATTAATGAAATCTGGTACTATTTATTTGATTTAAAAAAATTTCTCTAATATGCTGTTAATCTATGCATTTCCAGAAATCTTACACATACACATGTGACAATTATGTATTTTTAGTTCTAAGTTTGAATCTTAATAGATGGTCAAAACTGATCCACTTAGAACAATTTTGGGTTTAATTGTAATATAACCCCCAAAGTTCAGCGGTATAATTTAATTTTTTTCCAAAAATTTATCAAATGAAAAGGTTTCAAACTTGCCTTTGTTGCACTTGAGGATTAATATATATGTGGATCTGGGTCTTGATTGTGTATCATGTGATTGCTGTTGCATTCCAGAGTATGAGAACCCTAGGTGCGTTAATGATGAATTTAGGATTGGCTGAACTTTTTGTAGGAATGGAATTTTAGCTACTTCAACGTTTCTGTTTAAATCTCTTCTTTCAGTATTGTAACTCAATCCAAAGAAACATTTTAATAAAGTTTCATGGAATCCGGCATACTTTTTAGTCTCTGTCCTTGGAGTATGAACGTAAGAGAAGACAGAAGTAGAAGGCAACTTTTGCTCAGCTTCCAAAAAAAGAACGTCAATATATCCGCACTGCAATTAGACTTCTGTAATTTGTTTCAATGTTTTTAACCTTTGAGAAAAGGGTTAATTGAGCAATTGCCAGGGTTAATTGCACTTCACTACACTAATGTGTAAGAACTTAGCTCTCTAAGCCAAGTGGCTGTCACTCTCTAGCTTAAAGGCAGATACTTCATGGTACAAATCAAACACCTTTTTCACATTTTAGGCTTTTGAGTCTCATTTCCACACACATTGCACTCAAATGCCGGTTTCCAAATCCCTTAGTTCCTAAATCTAGACTTTCACGTTCCCGTTCCCTATTACCAAATGCTTCTCTAAACATTTTTACCTACCTATGAGTTCAAATACAATATCTACTCTCAAAAATGAATTTGATTACTGATGTATCTTAGCTAAATCTAAGACTATTTAAATTAGGTATTGCCTTTACTTTCTCATATTTTTTGACTAGTGTGACGTGAAAATCATCTCACTTTTTTTAACAGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGTCAGTCGACGGTACTTTTTACTTTCTTGGTTGAATTATAAGTTTAGTCTTTGAACTTTGAGATTTCTAGGAAAGTTTAGGGTGCCATTAAGTATAAAATTATAGATCTAATAGATCAATTCATTCTAAAAAATAATAATTTTTCAAAGACCTGTTAGACACGAGATTAAAAGTTTAAGGACCTATTAACCACAAATTGAGAGTTTTGGGGCCTACTAAACTCCTTATATCTTCTTTTTGAATAAATCATTGAGACACTTTTGAAAGTTTAGGGTCTAAATGACACAACCTAAAAATTCTAAGACCAAACTTTTAATTTAACCTATCTTCTTTAAATCCAGTCGAAATCGTTATGATTTCTTCAGGAATACAACTTTGTTTTAAGGCACCAAATGGAGGTAGAAAATAAAAGGTTAAATACCAAGCTTAGTTTTATAACTTCCATGTTTGTGTCTATAGGTCCCTAGACTCTTTAGTTGGTGTTTAATAAATCCCTAAAATTTAAAAATATTAGATAGGCCCTTAAACTTTTAATTTTTTGTGCTTTTGTAGATTTTTTAATTTTATGTTTGATAGAACATTAAACTTTTAATTGTGTGACCCTAAATTTATCAAACCAGAGAGCTATGAGACTTTTGTTATAAGACTCACCAACCAGTCCAGTTAGATATTTACCATCATATATACCGTCGGACCCAATAGATGTTCAATTCTGTCCAACTAGAAGTGCCTTTTACAAAGGCAGAGATCTGGAAGGCAGTCACAAGTCGGGCACGAATAAGCTTTTGGGACAATACAGTTTTACAGTGGAGTTCTTCTAGAATGCCTAGATCAACATCCTTAGAGTGTTCCATTTTTTTCCAGAATTCTATCATCAATGTTGGGCTTAAGAGGAGACTCATATTTACCTCACTCCCAAGAAATTGGATCCCAAATAAGTGGGGGACTATAGGCATATAAGTCTTGCATCTTGTTGATACAAATCATTACAAGGGTTCTCACTGATAAACTGAAATGTGTGCTGCCATGTTTTTTTTGCAAAAGTCAATTGGCCTTGTGGTCGGTCGACAAATCCCTGATGCTTCCTTCATTGCAAACAAGCTCATTGAGCATCCTTGTAAATCCTTGTAAGAGCAAAAAGGACAATTTTATCATTTAATCAGATTTGGAGAAACTGAAAGCTTTGGTAAGTTTGTTTGGGCATTTGTGTATGAGGTTCTAAAGGCCAAGGGGGTTTGAAACAAAAAGGAGTGGATGGACAAAGAGCTGTATGTCTTCTACAAACCTCGCTATCATCAAAAATAGCAAACCTAGAGGCAAAATCTTAGCATCTCTTTGAAAATTCAATTATTATTCATTGTTATGATTGTTATTTATACGATCGTGATCTTGCTCTTGTTGTATAATTTTAATTTGGCTTTTAGCAATTTAATGATATTTGGTCAAAGAGAGATTTTTGACAAGTTGACCTAGGAATGTTCATTATGGTTAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGGTATGCTAGCAAGTGCAATGATGATGACTTGA

mRNA sequence

ATGAGAGGCGAGGAGAGGGAGGCCATACCGCCTTGCAAATACCCAAGGCGAGCACCTTCAATGATGAGAGGCGAGGAGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGGTATGCTAGCAAGTGCAATGATGATGACTTGA

Coding sequence (CDS)

ATGAGAGGCGAGGAGAGGGAGGCCATACCGCCTTGCAAATACCCAAGGCGAGCACCTTCAATGATGAGAGGCGAGGAGGTACATTTTAGAGGTTATCCAAGACAATTGTTAATTCCTTGTGAAGGTGAAGATAGTATAAAGTGGAGCTTTATTAACTCATTAAAAGAGGCGGATTACATTATCAATGGGAACACCAAGAATGTCATGAGCATGTCGGAACCTGATCTGTTGGAGTTATGGCGTTCTGTATCCAATGGTATGCTAGCAAGTGCAATGATGATGACTTGA

Protein sequence

MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT*

Homology

[Close]

BLAST of Csa3G197930 vs. Swiss-Prot
Match: ATG5_ARATH (Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           +HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN KNVM+MS+ D  +LW SV NG
Sbjct: 100 IHFRGYPCNILIPCEGEDSVKWNFVNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNG 159

Query: 87  ML 89
            L
Sbjct: 160 DL 161

[Close]

BLAST of Csa3G197930 vs. Swiss-Prot
Match: ATG5_ORYSI (Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 3.7e-18
Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHFRGYP ++L PC+GEDS+KWS++NSLKEA +II GN+KNVM+MS+ D   LW+SV  G
Sbjct: 110 VHFRGYPSEILTPCDGEDSVKWSYMNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKG 169

Query: 87  MLASAM 93
            L   M
Sbjct: 170 NLDGYM 175

[Close]

BLAST of Csa3G197930 vs. Swiss-Prot
Match: ATG5_ORYSJ (Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.3e-17
Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHFRGYP ++L  C+GEDS+KWS++NSLKEA +II GN+KNVM+MS+ D   LW+SV  G
Sbjct: 110 VHFRGYPSEILTLCDGEDSVKWSYMNSLKEAAFIITGNSKNVMNMSQADQGALWQSVMKG 169

Query: 87  MLASAM 93
            L   M
Sbjct: 170 NLDGYM 175

[Close]

BLAST of Csa3G197930 vs. Swiss-Prot
Match: ATG5_ASPOR (Autophagy protein 5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atg5 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.8e-07
Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSI-KWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN 86
           VHF  +P + L+  + E  +   +FINS+KEAD++ NG  K +MS+S+ D   LW+SV N
Sbjct: 129 VHFSDWPDEELVRLDAEGMVMNDAFINSVKEADFLRNGTAKGIMSLSKEDSSGLWKSVQN 188

Query: 87  GMLAS 91
             L+S
Sbjct: 189 VELSS 193

[Close]

BLAST of Csa3G197930 vs. Swiss-Prot
Match: ATG5_COCIM (Autophagy protein 5 OS=Coccidioides immitis (strain RS) GN=ATG5 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 9.4e-06
Identity = 27/58 (46.55%), Postives = 35/58 (60.34%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKW-SFINSLKEADYIINGNTKNVMSMSEPDLLELWRSV 84
           VHF  +P Q LI  + E  I   +FINS+KEAD + NG  K +M++S+ D   LW+SV
Sbjct: 157 VHFHDWPEQDLIRLDPEGKILHDAFINSVKEADCLRNGTAKRIMALSKEDSSGLWKSV 214

[Close]

BLAST of Csa3G197930 vs. TrEMBL
Match: A0A0A0L6X2_CUCSA (Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197930 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 3.1e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI 60
          MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI
Sbjct: 1  MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI 60

Query: 61 INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT 96
          INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT
Sbjct: 61 INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT 95

[Close]

BLAST of Csa3G197930 vs. TrEMBL
Match: B9SKR7_RICCO (Autophagy protein 5 OS=Ricinus communis GN=RCOM_1604350 PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-22
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 12  CKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSM 71
           C  P R  ++     VHFRGYP  LLIPCEGEDS+KWSFINSLKEADYIINGN KNVM+M
Sbjct: 87  CAQPERPWNLT----VHFRGYPNNLLIPCEGEDSVKWSFINSLKEADYIINGNCKNVMNM 146

Query: 72  SEPDLLELWRSVSNGMLASAM 93
           S+ D +ELWRSV NG L + M
Sbjct: 147 SQSDQVELWRSVMNGNLEAYM 163

[Close]

BLAST of Csa3G197930 vs. TrEMBL
Match: M5XBI8_PRUPE (Autophagy protein 5 OS=Prunus persica GN=PRUPE_ppa007660mg PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.5e-21
Identity = 49/62 (79.03%), Postives = 54/62 (87.10%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHF GYP  +LIPCEGEDS+KWSFINSLKEA YIINGN KNVM+MS+PD +ELWRSV NG
Sbjct: 100 VHFTGYPGNILIPCEGEDSVKWSFINSLKEAAYIINGNCKNVMNMSQPDQVELWRSVLNG 159

Query: 87  ML 89
            L
Sbjct: 160 NL 161

[Close]

BLAST of Csa3G197930 vs. TrEMBL
Match: A0A151S0U1_CAJCA (Autophagy protein 5 OS=Cajanus cajan GN=KK1_029968 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 9.5e-21
Identity = 49/64 (76.56%), Postives = 54/64 (84.38%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHFRGYP  LL+PCEGEDS+KWSFINSLKEA Y+INGN KNVM+MS PD +ELW SV NG
Sbjct: 99  VHFRGYPSNLLLPCEGEDSVKWSFINSLKEAAYVINGNCKNVMNMSHPDQVELWGSVLNG 158

Query: 87  MLAS 91
            L S
Sbjct: 159 NLES 162

[Close]

BLAST of Csa3G197930 vs. TrEMBL
Match: V7B8P4_PHAVU (Autophagy protein 5 OS=Phaseolus vulgaris GN=PHAVU_008G241000g PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-20
Identity = 47/62 (75.81%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHFRGYP  +L+PCEGEDS+KWSFINSLKEA Y+INGN+KNVM+MS+PD +ELW SV NG
Sbjct: 99  VHFRGYPSNVLLPCEGEDSVKWSFINSLKEAAYVINGNSKNVMNMSQPDQVELWSSVLNG 158

Query: 87  ML 89
            L
Sbjct: 159 NL 160

[Close]

BLAST of Csa3G197930 vs. TAIR10
Match: AT5G17290.1 (AT5G17290.1 autophagy protein Apg5 family)

HSP 1 Score: 100.1 bits (248), Expect = 7.6e-22
Identity = 44/62 (70.97%), Postives = 50/62 (80.65%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           +HFRGYP  +LIPCEGEDS+KW+F+NSLKEA YIINGN KNVM+MS+ D  +LW SV NG
Sbjct: 100 IHFRGYPCNILIPCEGEDSVKWNFVNSLKEAQYIINGNCKNVMNMSQSDQEDLWTSVMNG 159

Query: 87  ML 89
            L
Sbjct: 160 DL 161

[Close]

BLAST of Csa3G197930 vs. NCBI nr
Match: gi|700202345|gb|KGN57478.1| (hypothetical protein Csa_3G197930 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 4.5e-48
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI 60
          MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI
Sbjct: 1  MRGEEREAIPPCKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI 60

Query: 61 INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT 96
          INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT
Sbjct: 61 INGNTKNVMSMSEPDLLELWRSVSNGMLASAMMMT 95

[Close]

BLAST of Csa3G197930 vs. NCBI nr
Match: gi|449446111|ref|XP_004140815.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 3.7e-26
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN 86
           VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN
Sbjct: 98  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN 156

[Close]

BLAST of Csa3G197930 vs. NCBI nr
Match: gi|659112386|ref|XP_008456193.1| (PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 4.8e-26
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSN 86
           VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYI+NGNTKNVMSMSEPDLLELWRSVSN
Sbjct: 98  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIVNGNTKNVMSMSEPDLLELWRSVSN 156

[Close]

BLAST of Csa3G197930 vs. NCBI nr
Match: gi|255571273|ref|XP_002526586.1| (PREDICTED: autophagy protein 5 [Ricinus communis])

HSP 1 Score: 113.2 bits (282), Expect = 2.5e-22
Identity = 55/81 (67.90%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 12  CKYPRRAPSMMRGEEVHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSM 71
           C  P R  ++     VHFRGYP  LLIPCEGEDS+KWSFINSLKEADYIINGN KNVM+M
Sbjct: 87  CAQPERPWNLT----VHFRGYPNNLLIPCEGEDSVKWSFINSLKEADYIINGNCKNVMNM 146

Query: 72  SEPDLLELWRSVSNGMLASAM 93
           S+ D +ELWRSV NG L + M
Sbjct: 147 SQSDQVELWRSVMNGNLEAYM 163

[Close]

BLAST of Csa3G197930 vs. NCBI nr
Match: gi|802613786|ref|XP_012074733.1| (PREDICTED: autophagy protein 5 [Jatropha curcas])

HSP 1 Score: 110.9 bits (276), Expect = 1.2e-21
Identity = 51/62 (82.26%), Postives = 55/62 (88.71%), Query Frame = 1


Query: 27  VHFRGYPRQLLIPCEGEDSIKWSFINSLKEADYIINGNTKNVMSMSEPDLLELWRSVSNG 86
           VHFRGYP  LLIPCEGEDS+KWSFINSLKEADYIINGN KNVM+MS+ D +ELWRSV NG
Sbjct: 100 VHFRGYPSNLLIPCEGEDSVKWSFINSLKEADYIINGNCKNVMNMSQSDQVELWRSVING 159

Query: 87  ML 89
            L
Sbjct: 160 NL 161

The following BLAST results are available for this feature:

BLAST of Csa3G197930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATG5_ARATH	1.4e-20	70.97	Autophagy protein 5 OS=Arabidopsis thaliana GN=ATG5 PE=2 SV=1	[more]
ATG5_ORYSI	3.7e-18	62.12	Autophagy protein 5 OS=Oryza sativa subsp. indica GN=ATG5 PE=3 SV=2	[more]
ATG5_ORYSJ	5.3e-17	60.61	Autophagy protein 5 OS=Oryza sativa subsp. japonica GN=ATG5 PE=2 SV=1	[more]
ATG5_ASPOR	3.8e-07	43.08	Autophagy protein 5 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=atg5 P...	[more]
ATG5_COCIM	9.4e-06	46.55	Autophagy protein 5 OS=Coccidioides immitis (strain RS) GN=ATG5 PE=3 SV=1	[more]

BLAST of Csa3G197930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6X2_CUCSA	3.1e-48	100.00	Autophagy protein 5 OS=Cucumis sativus GN=Csa_3G197930 PE=3 SV=1	[more]
B9SKR7_RICCO	1.7e-22	67.90	Autophagy protein 5 OS=Ricinus communis GN=RCOM_1604350 PE=3 SV=1	[more]
M5XBI8_PRUPE	9.5e-21	79.03	Autophagy protein 5 OS=Prunus persica GN=PRUPE_ppa007660mg PE=3 SV=1	[more]
A0A151S0U1_CAJCA	9.5e-21	76.56	Autophagy protein 5 OS=Cajanus cajan GN=KK1_029968 PE=3 SV=1	[more]
V7B8P4_PHAVU	1.2e-20	75.81	Autophagy protein 5 OS=Phaseolus vulgaris GN=PHAVU_008G241000g PE=3 SV=1	[more]

BLAST of Csa3G197930 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17290.1	7.6e-22	70.97	autophagy protein Apg5 family	[more]

BLAST of Csa3G197930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202345\|gb\|KGN57478.1\|	4.5e-48	100.00	hypothetical protein Csa_3G197930 [Cucumis sativus]	[more]
gi\|449446111\|ref\|XP_004140815.1\|	3.7e-26	100.00	PREDICTED: autophagy protein 5 isoform X1 [Cucumis sativus]	[more]
gi\|659112386\|ref\|XP_008456193.1\|	4.8e-26	98.31	PREDICTED: autophagy protein 5 isoform X1 [Cucumis melo]	[more]
gi\|255571273\|ref\|XP_002526586.1\|	2.5e-22	67.90	PREDICTED: autophagy protein 5 [Ricinus communis]	[more]
gi\|802613786\|ref\|XP_012074733.1\|	1.2e-21	82.26	PREDICTED: autophagy protein 5 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007239	Atg5

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006914	autophagy

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006810	transport
biological_process	GO:0010150	leaf senescence
biological_process	GO:0042594	response to starvation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU096062	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G197930.1	Csa3G197930.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU096062	CU096062	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007239	Autophagy-related protein 5	PANTHER	PTHR13040	AUTOPHAGY PROTEIN 5	coord: 27..86 score: 1.6
IPR007239	Autophagy-related protein 5	PFAM	PF04106	APG5	coord: 27..88 score: 4.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G197930	Lsi05G002590	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G197930	CSPI03G17940	Wild cucumber (PI 183967)	cpicuB120

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G197930	Wax gourd	cuwgoB283
Csa3G197930	Cucumber (Gy14) v1	cgycuB132
Csa3G197930	Cucurbita maxima (Rimu)	cmacuB245
Csa3G197930	Cucurbita maxima (Rimu)	cmacuB458
Csa3G197930	Cucurbita moschata (Rifu)	cmocuB232
Csa3G197930	Cucurbita moschata (Rifu)	cmocuB445
Csa3G197930	Melon (DHL92) v3.5.1	cumeB166
Csa3G197930	Watermelon (Charleston Gray)	cuwcgB230
Csa3G197930	Watermelon (97103) v1	cuwmB243
Csa3G197930	Cucurbita pepo (Zucchini)	cpecuB550
Csa3G197930	Cucurbita pepo (Zucchini)	cpecuB603
Csa3G197930	Cucumber (Gy14) v2	cgybcuB109
Csa3G197930	Melon (DHL92) v3.6.1	cumedB238
Csa3G197930	Silver-seed gourd	carcuB0196
Csa3G197930	Silver-seed gourd	carcuB0781
Csa3G197930	Watermelon (97103) v2	cuwmbB215