Csa3G186710 (gene) Cucumber (Chinese Long) v2

NameCsa3G186710
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13114446 .. 13117597 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGAGGACCATAAACAAAAGAACATATTGCAAATTTGTAACATTCCAAAATTCAAGGTAATTTCTAATTTAATTAGCTTGGATGTTGTATATATTCTTAGCAGATTTGCCTTTTCAATCATTTTTCTAATGAAAGTGGTTTTCATTATTGTTATGATTGTTTATTTGTTTTAAAAGGTAGGGTTTGTTAGGGTAACGTGCAATTGAATAAAAGAGAGTAGAAATTAGGAAATTTCCTTCTTCTTCCTCACGCTGAACGACGCTCACTATTGCTTCTGGCCGTTCAACTCCCTCCCACGACACCACGTCCAGCCGCTTCGCCCACACGCCGCCGACCGTCTGTCAAGTAGCCGTGAGCGACGACGTCTCCACGCTGTGAGCCGCGCCATCTCTTTCTCCGGGCCGCACGCCGTGAGCGAGCCGAGCTTCTCCTCCAACGCCGAGCCCCGCTGCGCCGATCTTCCCTCTGTCCAATCTCCTCCCCGGTGGGTTTTGGGTGAGTTTTTCGGCAATTAGTGAAGTCTTGTTTTGGGTTTCACCACCCATTACAGAACTAAATTTAAGGATAATTTGAGGGTTAAAGTTGGGGCTTTTCCTTGGTCTGAAGGTTCCCTTTGGAGAAGTTCTTGAATCGATTTGTGGTTTTCCATCCAGGTTGTGAAGTGAAAATTTTGGGTAAGCATTTGGAGGAGTAAACTGGGTTTAATCAATAATTTTGTTTGTCCAAAACTATTAATTTAATTTTAGTTATGTACAGGTTGAATTTTGGATTTCCAATTGCAATCATAATTTTCTCGCTCGAGCTTCGACCTGAACAGTGAACCTAACTTTATGATTGATAATTGATATGTGTGCTTCGACTGAAGTTAACCTAACCTTATGATTGATATGTGTGCTCCTACGGAACCATCAACTCTAAAGAATTGTTACAAAGAATGAAGTGAATTTTGATGAGGAATTGAAGAAATGTCTTTGGAATTATATTTGATAACTTAAATTTAGTATGCAATATCCATAATTGAGAAATTAGGGGTATTACTTAATAAGGTTTAATGTCAATCTTGCCTAATCAAAATTTGATTTGAATCTCATTGTTCTTACACTAAGTACTCTACTTGAAAATTAATCATGGAAATCAAGCAATTAATTGACCAAGAATTATGGTTTTTCAAGGCATTTTTTATGAAAACAGTGCCCAATGCCTTTTACTGCTATAATTCTTCAAGGATCTCTACAGTTTGTTAATTGAATTTTTGAAGAATAATTTCTCCTCACAATTGCACTTGAATTTAGTTTCTTGAATGTCTTTTACTTCACAAGATTGCATTCCCATAATTTCTTCTTGTGTTAAAAGTTATTAATCAATTCTTTCTTGAGATTTATATTTCAAGAATTTTTTACTGAATTCTCTTGAATATTCTAATTGCATTCCTTTATGCACAATCATAAGTCTTTCGTTCAATATCTCGAATCTTTATATCTATTTTACATTATCAATTCAATCTTTTTAATGTCCTACCAAAAAGAGCTTTCAAACTACAGGATTTCAAGTGATCATCCATGTTTTTTAGGTTTTATTTCATTTTTACTTAATAAAATGGTTAGATCTTGCATTGTTTTTATTTTTTTATTATTCTTTTAAAAGTGTTTTCAATTGATGACGACCGTACTTAATTTAGAAAAGTTGGTGGTTACAAAATCATTGACTTAAAAAAATGCAGATTGAGAGGGAGAAGAAGCAAAAAATTAGAGAAATTTTCTTAATTTCACAAGAGATGACGTATACAAAATGCTAAATAAGCGTTTATTTTAAAAAACTTAGATCAAATTTAATTAGGTCTTCCATTTTGAGCTATCCATGTCATTTTTCCACTAATGTGTATTATATTATTTAAAACTAAATCTAAGTCCGTCCATGCAAAGCATATTTTTCAACTCATAAAAGATTTTTATTCTTTCCAATCTTTTTAGGTTTTGATATGCTTTTTTTAGTAAAAGAAAAAAAGAAAAGAAAAAGAGTCAAATTCACTATTTTGTTCAAAGTGCATGTGAAATTGCCGTTTACATTGAGGAATAGAAAGTTTTTTCAAACAAACAAACAAGAAAGGGTTTAAAAATTTTAAAATTAAAATTAAAATTAAAATAAAGAAACAAAACAAAACAAATAATTTGGATCTGCCGTTCTTCGAGCAGATTAGATCCGGAGATTCGAAAATTCTTCGTTCTTCGTCCTAATTTCCCCCATCGCCATTTTCGCAGCTTCGAAGGTAATTTTACTTTTTCAATCCTCTTTTTCGCTCTCCATTACAATATGTTTCACACTAAATTTTTTTTTTCTTCTTCTTCTATATTCTCTGGATCTGATTATTCTCTATCCGTTTCTCTCTTATTTTCTTTTCCTATCTTGTTGATATATTAATTTTTTGATGCATTTATGATTCTGATTTAATTCAATTAAGAAATTTTGGGAATTAAAAATGATCTTTGTCATCTCTGTTTCCGAGAAATGAAATATAATGTGGTATATCGTTGGATTGTGTCTGGTTTAGCTGTATGTCAAGTTGTTGCTTGGAAACTAGTAACAGCATCCTGTTGTTCTTAGTTTTAAAGTTGATTAGGTAGTATTCAAGATTAATATGGTGGTACGGTGGGTGGAAACGTGGATCCATGGAGAGGGGAGTGAACAATGTAGTTGGAACTGGAAGTTCATAACTTAGGTATTTGGAATCTGCATCTATTGAAATAAGAATAATGAAATCTACGTAAGTTCTTTTGTTATTATTATATGTTGCTGTGCATTTCACTTTCCTTATTATTATCTTTGGTTCTTTTAATGTTGTGTGGGTGTGAGTGAGAGCTTAAGGAAGGTTGACTGGTAGATCTTTCTGTTTCTGATATTGGATGGTATGATTTCTATGGATGAAGTATTGTCATATTATGTCTATGATTTCTGTTTGTCGACTAAAAAGTGGGTTGGTTCCATTTCAGAGAAATGGTTGCCCATCTATAAATTGGAGCTAGCTCTTATATTGGTATTTCAGTGAAAGATACTGCCAGTTCATTTGCTTCTGACTTATAACCAGTCAACCTGCAGGCTGCAATTTTATAATTATTGGCGTTGCTGCTTACCTGAGCTTTTCTAGTTAA

mRNA sequence

ATGAAAAGGAGGACCATAAACAAAAGAACATATTGCAAATTTGTAACATTCCAAAATTCAAGCCGCTTCGCCCACACGCCGCCGACCGTCTGTCAAGTAGCCGTGAGCGACGACGTCTCCACGCTAAACAAAACAAAACAAATAATTTGGATCTGCCGTTCTTCGAGCAGATTAGATCCGGAGATTCGAAAATTCTTCGTTCTTCGTCCTAATTTCCCCCATCGCCATTTTCGCAGCTTCGAAGGCTGCAATTTTATAATTATTGGCGTTGCTGCTTACCTGAGCTTTTCTAGTTAA

Coding sequence (CDS)

ATGAAAAGGAGGACCATAAACAAAAGAACATATTGCAAATTTGTAACATTCCAAAATTCAAGCCGCTTCGCCCACACGCCGCCGACCGTCTGTCAAGTAGCCGTGAGCGACGACGTCTCCACGCTAAACAAAACAAAACAAATAATTTGGATCTGCCGTTCTTCGAGCAGATTAGATCCGGAGATTCGAAAATTCTTCGTTCTTCGTCCTAATTTCCCCCATCGCCATTTTCGCAGCTTCGAAGGCTGCAATTTTATAATTATTGGCGTTGCTGCTTACCTGAGCTTTTCTAGTTAA

Protein sequence

MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDPEIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS*
BLAST of Csa3G186710 vs. TrEMBL
Match: A0A0A0L8X8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186710 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 3.4e-50
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1

Query: 1  MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP 60
          MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP
Sbjct: 1  MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP 60

Query: 61 EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS 99
          EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS
Sbjct: 61 EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS 98

BLAST of Csa3G186710 vs. NCBI nr
Match: gi|700202311|gb|KGN57444.1| (hypothetical protein Csa_3G186710 [Cucumis sativus])

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-50
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1

Query: 1  MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP 60
          MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP
Sbjct: 1  MKRRTINKRTYCKFVTFQNSSRFAHTPPTVCQVAVSDDVSTLNKTKQIIWICRSSSRLDP 60

Query: 61 EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS 99
          EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS
Sbjct: 61 EIRKFFVLRPNFPHRHFRSFEGCNFIIIGVAAYLSFSS 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L8X8_CUCSA3.4e-50100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G186710 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700202311|gb|KGN57444.1|4.9e-50100.00hypothetical protein Csa_3G186710 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU087444cucumber EST collection version 3.0transcribed_cluster
CU096708cucumber EST collection version 3.0transcribed_cluster
CU097557cucumber EST collection version 3.0transcribed_cluster
CU120962cucumber EST collection version 3.0transcribed_cluster
CU166616cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G186710.1Csa3G186710.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU096708CU096708transcribed_cluster
CU097557CU097557transcribed_cluster
CU087444CU087444transcribed_cluster
CU120962CU120962transcribed_cluster
CU166616CU166616transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None