Csa3G128900 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G128900
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ring finger protein, putative; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
Location	Chr3 : 8211649 .. 8213080 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCCGCCGACGCCGCCATTGCCGGACGATCTTGCCATTGGCTACTTTTCATCATCTCCTCCTCCTCCTCCTTCGCCGGTCTCCAGTCACACCTCGTTGAAGAATCTCAGTCCCAGCATCTTAATCATTCTTACGATTCTTGCATTTACAGCCTTTTCTTCGGGGATTCTCTGCCTTGTTCTCCGTTACCTTAACCGACGGTGTCTTCTCCGTCTCTCTGCCTTGTCTGGATCGTCATCTTCCTCTACTGTTTCTAGTCGCCGCATTATTCCAGCAGAACAAAGTGCGGTTCGTTGTACTAACTCTTTCTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTCACGCGTCGTTCTTCCACTGCCGCCGCTGATTGCGCCGTTTGTTTGTCGAAATTTGAAGCGGAAGATCAGCTTCGTCTTCTTCCTCTCTGTTGCCATGCGTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCCGCCATTTTCGCTTCTGAATCCGATGTAATGAAGGCATCCATGGCTTCCTATGCCGCCGAAGGTCGCGGCGGGGACAGTTTTAGGCTCGAGATTGGCAGTATTAGCCGTAGACAAGCGCCGTCCGACTCTGCCGAAGGAAGGAGATCGTATTCGATAGGATCGTTCGAATATTTCGTCGAAGAAGATTCCGAGGTAAACTTCACCAATGCTCACCGGAGGAGCGTCTCCGATAAGGAGGACATCGAAGCTCCTATATCAGCGGTATCTACAGAGCGAAGCCTAGCGGCGGAAGTCGGGTCTGGAAGGAATTGGCTGAAGGACTACGTCGATAGGCTCTCGAATTCGGTATCATCTCGTGCACTGTCTTTCCGAGGCTCCGGTAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTGACAGTCGCGGGAGAATGGGAACAGGAGAACAACCGCGTCGGAGAGGAAATAAGCGAGTTATTCCGGTGGTTTTCAGGGGTATGATCGTAATTACAGCACACGGGAAGAGGATTTAGAAATTTAAGGAGTTGGGTTAATCGCCGGCCGATTGGTACGCAAGTATATCTTTTTTTTGCCTTATTGAAAACGGACGGTGAAGATTCCTATTCCTTTTGATCCTTTTGATTATGTCAACGGCTGAGATTCAAGCTGGTAATCTTGTGAATAATTTTTTTTTTTCACAATTATACACCAAACATTAATTTTGTTGGCATTTAATCAAAAAGCTCAAAAAGATTGCTGAGATTTTTCTGTTACCTCGTTTTGGCTGGGATTAAAGTAAACAAAAGTTTCCCATCGTGGCAGTGAAGCCTAATACCACACTTTGAATTCATATTTTATGAAAAATGTGCCATTTTTCTTTCTATATATATATAAAAAAAAACCATTTATCCCA

mRNA sequence

ATGGCTTCTCCGCCGACGCCGCCATTGCCGGACGATCTTGCCATTGGCTACTTTTCATCATCTCCTCCTCCTCCTCCTTCGCCGGTCTCCAGTCACACCTCGTTGAAGAATCTCAGTCCCAGCATCTTAATCATTCTTACGATTCTTGCATTTACAGCCTTTTCTTCGGGGATTCTCTGCCTTGTTCTCCGTTACCTTAACCGACGGTGTCTTCTCCGTCTCTCTGCCTTGTCTGGATCGTCATCTTCCTCTACTGTTTCTAGTCGCCGCATTATTCCAGCAGAACAAAGTGCGGTTCGTTGTACTAACTCTTTCTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTCACGCGTCGTTCTTCCACTGCCGCCGCTGATTGCGCCGTTTGTTTGTCGAAATTTGAAGCGGAAGATCAGCTTCGTCTTCTTCCTCTCTGTTGCCATGCGTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCCGCCATTTTCGCTTCTGAATCCGATGTAATGAAGGCATCCATGGCTTCCTATGCCGCCGAAGGTCGCGGCGGGGACAGTTTTAGGCTCGAGATTGGCAGTATTAGCCGTAGACAAGCGCCGTCCGACTCTGCCGAAGGAAGGAGATCGTATTCGATAGGATCGTTCGAATATTTCGTCGAAGAAGATTCCGAGGTAAACTTCACCAATGCTCACCGGAGGAGCGTCTCCGATAAGGAGGACATCGAAGCTCCTATATCAGCGGTATCTACAGAGCGAAGCCTAGCGGCGGAAGTCGGGTCTGGAAGGAATTGGCTGAAGGACTACGTCGATAGGCTCTCGAATTCGGTATCATCTCGTGCACTGTCTTTCCGAGGCTCCGGTAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTGACAGTCGCGGGAGAATGGGAACAGGAGAACAACCGCGTCGGAGAGGAAATAAGCGAGTTATTCCGGTGGTTTTCAGGGGTATGA

Coding sequence (CDS)

ATGGCTTCTCCGCCGACGCCGCCATTGCCGGACGATCTTGCCATTGGCTACTTTTCATCATCTCCTCCTCCTCCTCCTTCGCCGGTCTCCAGTCACACCTCGTTGAAGAATCTCAGTCCCAGCATCTTAATCATTCTTACGATTCTTGCATTTACAGCCTTTTCTTCGGGGATTCTCTGCCTTGTTCTCCGTTACCTTAACCGACGGTGTCTTCTCCGTCTCTCTGCCTTGTCTGGATCGTCATCTTCCTCTACTGTTTCTAGTCGCCGCATTATTCCAGCAGAACAAAGTGCGGTTCGTTGTACTAACTCTTTCTCTCCAATCGAATCGCTTCCTCTGTTCTCTTTCTCCTCCGTCACGCGTCGTTCTTCCACTGCCGCCGCTGATTGCGCCGTTTGTTTGTCGAAATTTGAAGCGGAAGATCAGCTTCGTCTTCTTCCTCTCTGTTGCCATGCGTTTCACGCTCAATGCGTCGATACTTGGCTTCAATCGAACCAGAGTTGTCCTCTTTGCCGCTCCGCCATTTTCGCTTCTGAATCCGATGTAATGAAGGCATCCATGGCTTCCTATGCCGCCGAAGGTCGCGGCGGGGACAGTTTTAGGCTCGAGATTGGCAGTATTAGCCGTAGACAAGCGCCGTCCGACTCTGCCGAAGGAAGGAGATCGTATTCGATAGGATCGTTCGAATATTTCGTCGAAGAAGATTCCGAGGTAAACTTCACCAATGCTCACCGGAGGAGCGTCTCCGATAAGGAGGACATCGAAGCTCCTATATCAGCGGTATCTACAGAGCGAAGCCTAGCGGCGGAAGTCGGGTCTGGAAGGAATTGGCTGAAGGACTACGTCGATAGGCTCTCGAATTCGGTATCATCTCGTGCACTGTCTTTCCGAGGCTCCGGTAGGTTCTTCACCGGAAGTAGTCGACGGAGTGAGGTGACAGTCGCGGGAGAATGGGAACAGGAGAACAACCGCGTCGGAGAGGAAATAAGCGAGTTATTCCGGTGGTTTTCAGGGGTATGA

Protein sequence

MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV*

Homology

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BLAST of Csa3G128900 vs. Swiss-Prot
Match: ATL4_ARATH (E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.7e-81
Identity = 177/321 (55.14%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 30  SSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGSSSSSTVSSR 89
           S  +SL +L PS+L+I+ IL  T   S  +C +LR LNR     +  LS SSS +TV+S 
Sbjct: 16  SHSSSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSD 75

Query: 90  RIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTA-AADCAVCLSKFEAEDQLRLLPL 149
               +       T   S ++SLP+F FSSVTRRSS+  + DCAVCLSKFE EDQLRLLPL
Sbjct: 76  SRRFSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPL 135

Query: 150 CCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSIS 209
           CCHAFHA C+D WL SNQ+CPLCRS +FASESD+MK+     +  G G +SFRLEIGSIS
Sbjct: 136 CCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSIS 195

Query: 210 -RRQAP-SDSAEGRRSYSIGSFEYFVEE-DSEVNFTNAHRRSVSDKEDIEAPISAVST-- 269
            RRQ P  +S E  R+YSIGSF+Y V++ DSE++ +N +R    D     A  +AV+T  
Sbjct: 196 RRRQTPIPESVEQHRTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNP 255

Query: 270 ---ERSLAAEVGS--GRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVTVAGEW 329
              E SLAA++G+   R+WLKDYVDRLS  +SSRA+SFR SGRFFTGSSRRSE       
Sbjct: 256 TSFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRRSEELTV--M 315

Query: 330 EQENNRVGEEISELFRWFSGV 340
           + E N  GEEISELFRW SGV
Sbjct: 316 DLEANHAGEEISELFRWLSGV 334

[Close]

BLAST of Csa3G128900 vs. Swiss-Prot
Match: ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.6e-26
Identity = 95/317 (29.97%), Postives = 144/317 (45.43%), Query Frame = 1


Query: 19  SSSPPPPPSPVSSHTSLKNLS----PSILIILTILAFTAFSSGILCLVLRYLNRRCLLRL 78
           SSSPPPP  P+ S+TSL NL+    P+IL+I+ IL+   F SG+L +++++L        
Sbjct: 16  SSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPSRESR 75

Query: 79  SALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCL 138
                + ++     +++     S V      S I++LP+F + S+      +  DC VCL
Sbjct: 76  EDYFDNVTALQGQLQQLFNLHDSGV----DQSLIDTLPVFHYKSIVGLK-ISPFDCPVCL 135

Query: 139 SKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEG 198
            +FE ED+LRLLP C HAFH +C+DTWL S+ +CPLCRS + +  S     S +SY    
Sbjct: 136 CEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLS-SSYL--- 195

Query: 199 RGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDI 258
                  LE    SR   P   +  +  Y        V  DSE     + R+S     D+
Sbjct: 196 -----LVLESEQSSRDMVPVLESNSQLGYD-------VNNDSESTRIRSGRKSCDPDGDM 255

Query: 259 E------APISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSR 318
           +       P+     +      VG G +  K+ +   S +V  R     GS  +      
Sbjct: 256 DGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEA 311

Query: 319 RSEVTVAGEWEQENNRV 326
             +V V+ +     +RV
Sbjct: 316 TLKVHVSTKKLSGKDRV 311

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BLAST of Csa3G128900 vs. Swiss-Prot
Match: ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.2e-23
Identity = 90/328 (27.44%), Postives = 143/328 (43.60%), Query Frame = 1


Query: 21  SPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGS 80
           SPP PP P S +     +SP++L ++ ILA   F SG+L L++R+L +      +A S S
Sbjct: 28  SPPSPPPPSSGN----RISPAVLFVIVILAVLFFISGLLHLLVRFLIKHP--SATASSRS 87

Query: 81  SSSSTVSSRRIIPAEQSAVRCTNSFSP----IESLPLFSFSSVTRRSSTAAA-------- 140
           +    +S+   +  +   +   N        I++LP+F +  +   +             
Sbjct: 88  NRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPF 147

Query: 141 DCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA----------- 200
           DCAVCL +F  +D+LRLLP+C HAFH  C+DTWLQSN +CPLCR  +F+           
Sbjct: 148 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFD 207

Query: 201 -----------SESDVMKASMASYAAEGRGGDSFRL-------EIGS------ISRRQAP 260
                      +E+   K          +G    RL        +G+      ++  +  
Sbjct: 208 FDDIREDEEGVTENGSQKTMEIQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETS 267

Query: 261 SDSAEGRRSYSIGSFEYFV-EEDSEVNFTNAH--RRSVSDKEDIEAPISAVSTERSLAAE 293
           S + + RR +S+GS++Y +   + +V F N    R    DKE  E   ++ S +      
Sbjct: 268 SSNLDARRCFSMGSYQYILGNSELKVPFANDRLPRLKPQDKES-EQTGNSSSEDNKKINT 327

[Close]

BLAST of Csa3G128900 vs. Swiss-Prot
Match: ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 1.5e-21
Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = 1


Query: 19  SSSPPPPPSPVSSHTSL---KNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLS 78
           SS P  PP  + S  +      +SPSIL+I+ IL+   F SG+L L++R+L         
Sbjct: 25  SSLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSRDRE 84

Query: 79  ALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLS 138
               + ++     +++     S V    SF  I++LP+F + S+    +    DCAVCL 
Sbjct: 85  DYFDNVTALQGQLQQLFHLHDSGV--DQSF--IDTLPVFHYKSIIGLKNYPF-DCAVCLC 144

Query: 139 KFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 181
           +FE ED+LRLLP C HAFH  C+DTWL S+ +CPLCRS++ +  S
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLS 184

[Close]

BLAST of Csa3G128900 vs. Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-20
Identity = 67/228 (29.39%), Postives = 111/228 (48.68%), Query Frame = 1


Query: 21  SPPPPPSPVSSHTSLKN------------LSPSILIILTILAFTAFSSGILCLVLRYLNR 80
           SP   PSP++ +  L +            +SP IL I+ +L+   F   IL L++RY  +
Sbjct: 20  SPSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLK 79

Query: 81  RCLLRLSALSGSSSSSTVSS---------RRIIPAEQSAVRCTNSFSPIESLPLFSFSSV 140
           +    LS+    S+ +   S         +++     S +      + I++LP+F +  +
Sbjct: 80  KKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL----DQALIDALPVFLYKEI 139

Query: 141 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA-- 200
             + +    DCAVCL +F  +D+LRLLP C HAFH  C+DTWL SN +CPLCR  +F+  
Sbjct: 140 --KGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLG 199

Query: 201 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSI 226
            + +    +   +A +  GG         +S  Q P+++  G+R +S+
Sbjct: 200 HQFEYPDFNFGFFAGDDGGGGV------RVSPVQKPAENEIGKRVFSV 235

[Close]

BLAST of Csa3G128900 vs. TrEMBL
Match: A0A0A0L3Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128900 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 8.4e-189
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1


Query: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60
           MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC
Sbjct: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60

Query: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120
           LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT
Sbjct: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120

Query: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180
           RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES
Sbjct: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180

Query: 181 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 240
           DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF
Sbjct: 181 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 240

Query: 241 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 300
           TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG
Sbjct: 241 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 300

Query: 301 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV
Sbjct: 301 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339

[Close]

BLAST of Csa3G128900 vs. TrEMBL
Match: A0A067JYE0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14673 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.2e-104
Identity = 211/335 (62.99%), Postives = 255/335 (76.12%), Query Frame = 1


Query: 19  SSSPPPPPSPV--------SSHTS-LKNLSPSILIILTILAFTAFSSGILCLVLRYLNRR 78
           SSS P PPSP+         +HTS  +NL PSIL+I+ IL+ T   S  LCL+LR+LNRR
Sbjct: 35  SSSSPSPPSPLLPFNNNSEDAHTSPFQNLKPSILVIVLILSITFLLSISLCLLLRHLNRR 94

Query: 79  CLLRLSALSGSSSSS-TVSSRRIIPAEQSAVRCTN---SFSPIESLPLFSFSSVTRRSST 138
           CL  LS  S +S+++ T+++        S  R +    +FS I SLPLFSFSS+ RRS+T
Sbjct: 95  CLRHLSPTSHASTTAITITTSSASSTRHSTNRVSPESPAFSIINSLPLFSFSSIKRRSAT 154

Query: 139 AAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKA 198
            + DCAVCLSKFE++DQLRLLPLCCHAFHA C+DTWLQSNQ+CPLCRS I ASESD+ KA
Sbjct: 155 TSGDCAVCLSKFESQDQLRLLPLCCHAFHAHCIDTWLQSNQTCPLCRSPIHASESDLFKA 214

Query: 199 SMASYAAEGRGGDSFRLEIGSISRRQAPSDSA-EGRRSYSIGSFEYFVEEDSEVNFTNAH 258
             +S   +G G +SFRLEIGSISRRQA SDSA E R SYS+GSFEY VEE+SEV  ++ H
Sbjct: 215 LSSSI--DGSGAESFRLEIGSISRRQAASDSAVETRGSYSVGSFEYVVEEESEVTMSHTH 274

Query: 259 RRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFT 318
           RRSVSDKE I AP+S    E +LA+EV SGR+WLKDYVDRLSN++SSRALSFR SGRFFT
Sbjct: 275 RRSVSDKE-IVAPVSPSCQEPNLASEVASGRSWLKDYVDRLSNTLSSRALSFRSSGRFFT 334

Query: 319 GSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           GSSRRSE+   G+++ E NR+GEEISE+FRWFSGV
Sbjct: 335 GSSRRSEIGSVGDYDVEANRMGEEISEMFRWFSGV 366

[Close]

BLAST of Csa3G128900 vs. TrEMBL
Match: A0A061DVX8_THECC (Toxicos en levadura 4, putative OS=Theobroma cacao GN=TCM_005794 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 9.5e-100
Identity = 201/323 (62.23%), Postives = 248/323 (76.78%), Query Frame = 1


Query: 27  SPVSSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGSS--SSS 86
           S  SS +S++N+ PSI+II+ IL+ T   S  LCL+LR+LNRRCL  LS  + S+  S++
Sbjct: 36  SSSSSSSSIENVKPSIIIIILILSITVLVSVSLCLLLRHLNRRCLRHLSRSTTSTITSAA 95

Query: 87  TVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRS---STAAADCAVCLSKFEAED 146
             +S R+ P E          S ++SLP+F+FSS+ RRS   ST + DCAVCLSKFE+ D
Sbjct: 96  ATASHRVSPEESQTA------SLLDSLPVFTFSSIIRRSNNDSTVSGDCAVCLSKFESHD 155

Query: 147 QLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKA---SMASYAAEGRGG- 206
           QLRLLPLCCHAFHA C+DTWL SNQ+CPLCRS +FASESD+MK    S  S AA G GG 
Sbjct: 156 QLRLLPLCCHAFHAHCIDTWLASNQTCPLCRSPLFASESDLMKVLLQSSNSAAAIGSGGS 215

Query: 207 DSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDIEAP 266
           DSFRLEIGSISRRQ  S+S E RRSYSIGSF+Y VEE+SEV     HRR+VSDKED+ AP
Sbjct: 216 DSFRLEIGSISRRQPGSESGEQRRSYSIGSFDYVVEEESEVTRNQTHRRTVSDKEDVAAP 275

Query: 267 ISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVT-VAG 326
           ++A  +E SLAAEV +GR+WLK+YVDRLS S+SSRA+SFR SGRFFTGSSRRS+++ VA 
Sbjct: 276 VAA--SEASLAAEVATGRSWLKEYVDRLSFSLSSRAMSFRSSGRFFTGSSRRSDISGVAV 335

Query: 327 EWEQENNRVGEEISELFRWFSGV 340
           +++ E NR+GEEISE+FRWFSGV
Sbjct: 336 DYDVEANRIGEEISEMFRWFSGV 350

[Close]

BLAST of Csa3G128900 vs. TrEMBL
Match: A0A0D2R0B8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G067900 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 202/349 (57.88%), Postives = 251/349 (71.92%), Query Frame = 1


Query: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60
           MASPP  PL   +  G  +SS         S +S+++  PSI+II+ IL+ T   S  LC
Sbjct: 1   MASPP--PLLYGVIGGPVASSENNSSERSHSSSSIESAKPSIIIIILILSITLLVSVSLC 60

Query: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120
           L+LR+LNRRCL  LS  S S+  ++ +S R+ P EQS          ++SLPLF+FSS+T
Sbjct: 61  LLLRHLNRRCLRHLSRSSTSTIVASAASHRVSP-EQSPTALL-----LDSLPLFTFSSIT 120

Query: 121 RR----SSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIF 180
           RR     ST + DCAVCLSKFE +DQLRLLPLCCHAFHAQC+DTWL SNQ+CPLCRS +F
Sbjct: 121 RRRSNGDSTVSGDCAVCLSKFEQQDQLRLLPLCCHAFHAQCIDTWLTSNQTCPLCRSPLF 180

Query: 181 ASESDVMKASMASYAAE---GRGG-DSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFV 240
           ASESD+MK+ + S  A    G GG DSFRLEIGS+S RQ  S+S E RRSYSIGSF+Y V
Sbjct: 181 ASESDLMKSLLQSSNAAAPIGSGGSDSFRLEIGSVSLRQPGSESGEQRRSYSIGSFDYIV 240

Query: 241 EEDSEVNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSR 300
           EE+SEV     H+R+VSDKE++     A S E SLA EV +GR+WLK+YVDRLS+S+SSR
Sbjct: 241 EEESEVTRNQTHQRNVSDKEEVVGGAEAAS-EASLAGEVATGRSWLKEYVDRLSSSLSSR 300

Query: 301 ALSFRGSGRFFTGSSRRSEV--TVAGEWEQENNRVGEEISELFRWFSGV 340
           A+SFR SGRFFTGSSRRS++   V  +++ E NR+GEEISE+FRWFSGV
Sbjct: 301 AMSFRSSGRFFTGSSRRSDIAGVVTADYDVEANRIGEEISEMFRWFSGV 340

[Close]

BLAST of Csa3G128900 vs. TrEMBL
Match: W9R595_9ROSA (E3 ubiquitin-protein ligase ATL4 OS=Morus notabilis GN=L484_008028 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.9e-96
Identity = 210/362 (58.01%), Postives = 251/362 (69.34%), Query Frame = 1


Query: 19  SSSPPPPPS-------------PVSSHT--SLKNLSPSILIILTILAFTAFSSGILCLVL 78
           SSSPPP PS             P  +HT  SL N+SPSI II+ ILA T  +S  LC +L
Sbjct: 2   SSSPPPWPSVFGASATPMSFGTPPPTHTVSSLGNISPSIFIIIIILAVTVIASVSLCFLL 61

Query: 79  RYLNRRCLLRLSALSGSSSSST-------------VSSRRIIPAEQSAVRCTNSFSPIES 138
           R+LNRRCL  LS LS SSS S+             +SSRR+ PAE +     ++ S IE+
Sbjct: 62  RHLNRRCLRHLSPLSSSSSPSSSTAAAAVGDSHRAISSRRVSPAENN-----HNSSLIEA 121

Query: 139 LPLFSFSSVTRR----SSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQ 198
           LPLF+F+SVTRR    S+  AADCAVCLSKFE +DQLRLLPLCCHAFHA CVDTWLQSNQ
Sbjct: 122 LPLFAFASVTRRGAATSAIFAADCAVCLSKFEPDDQLRLLPLCCHAFHALCVDTWLQSNQ 181

Query: 199 SCPLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSISRRQ-APSDS------AEG 258
           +CPLCRS IF S+++++K S+      G    SFRLEIG++SRRQ  PSDS         
Sbjct: 182 TCPLCRSPIFVSDAEILK-SLGEINRRGDNSGSFRLEIGNVSRRQTTPSDSNFSGDLGRR 241

Query: 259 RRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEV-GSGRNWL 318
            RSYSIGSF+Y VEEDSEV  TNAHRR++SD ++   P S    E S+ AEV  SGR+WL
Sbjct: 242 SRSYSIGSFDYLVEEDSEVVLTNAHRRTISDFKEPPPPASIPVPEPSVVAEVASSGRSWL 301

Query: 319 KDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVTV-AGEWEQENNRVGEEISELFRWFS 340
           K+YVDRLS S+SSRA+SFR SGRFF+GSSRRS+V +  GEW+ E +RVGEEISELFRW S
Sbjct: 302 KEYVDRLSMSLSSRAMSFRSSGRFFSGSSRRSDVVLGVGEWDLEASRVGEEISELFRWVS 357

[Close]

BLAST of Csa3G128900 vs. TAIR10
Match: AT3G60220.1 (AT3G60220.1 TOXICOS EN LEVADURA 4)

HSP 1 Score: 304.3 bits (778), Expect = 9.5e-83
Identity = 177/321 (55.14%), Postives = 216/321 (67.29%), Query Frame = 1


Query: 30  SSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGSSSSSTVSSR 89
           S  +SL +L PS+L+I+ IL  T   S  +C +LR LNR     +  LS SSS +TV+S 
Sbjct: 16  SHSSSLDSLKPSVLVIILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSD 75

Query: 90  RIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTA-AADCAVCLSKFEAEDQLRLLPL 149
               +       T   S ++SLP+F FSSVTRRSS+  + DCAVCLSKFE EDQLRLLPL
Sbjct: 76  SRRFSGHRVSPETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPL 135

Query: 150 CCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSIS 209
           CCHAFHA C+D WL SNQ+CPLCRS +FASESD+MK+     +  G G +SFRLEIGSIS
Sbjct: 136 CCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSIS 195

Query: 210 -RRQAP-SDSAEGRRSYSIGSFEYFVEE-DSEVNFTNAHRRSVSDKEDIEAPISAVST-- 269
            RRQ P  +S E  R+YSIGSF+Y V++ DSE++ +N +R    D     A  +AV+T  
Sbjct: 196 RRRQTPIPESVEQHRTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNP 255

Query: 270 ---ERSLAAEVGS--GRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSRRSEVTVAGEW 329
              E SLAA++G+   R+WLKDYVDRLS  +SSRA+SFR SGRFFTGSSRRSE       
Sbjct: 256 TSFEASLAADIGNDGSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRRSEELTV--M 315

Query: 330 EQENNRVGEEISELFRWFSGV 340
           + E N  GEEISELFRW SGV
Sbjct: 316 DLEANHAGEEISELFRWLSGV 334

[Close]

BLAST of Csa3G128900 vs. TAIR10
Match: AT2G18650.1 (AT2G18650.1 RING/U-box superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.5e-27
Identity = 95/317 (29.97%), Postives = 144/317 (45.43%), Query Frame = 1


Query: 19  SSSPPPPPSPVSSHTSLKNLS----PSILIILTILAFTAFSSGILCLVLRYLNRRCLLRL 78
           SSSPPPP  P+ S+TSL NL+    P+IL+I+ IL+   F SG+L +++++L        
Sbjct: 16  SSSPPPPLIPLKSNTSLSNLNSKITPNILLIIIILSIIFFISGLLHILVKFLLTPSRESR 75

Query: 79  SALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCL 138
                + ++     +++     S V      S I++LP+F + S+      +  DC VCL
Sbjct: 76  EDYFDNVTALQGQLQQLFNLHDSGV----DQSLIDTLPVFHYKSIVGLK-ISPFDCPVCL 135

Query: 139 SKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKASMASYAAEG 198
            +FE ED+LRLLP C HAFH +C+DTWL S+ +CPLCRS + +  S     S +SY    
Sbjct: 136 CEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLS-SSYL--- 195

Query: 199 RGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNFTNAHRRSVSDKEDI 258
                  LE    SR   P   +  +  Y        V  DSE     + R+S     D+
Sbjct: 196 -----LVLESEQSSRDMVPVLESNSQLGYD-------VNNDSESTRIRSGRKSCDPDGDM 255

Query: 259 E------APISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFTGSSR 318
           +       P+     +      VG G +  K+ +   S +V  R     GS  +      
Sbjct: 256 DGLDEKVVPLEVKLGKFRNIDHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEA 311

Query: 319 RSEVTVAGEWEQENNRV 326
             +V V+ +     +RV
Sbjct: 316 TLKVHVSTKKLSGKDRV 311

[Close]

BLAST of Csa3G128900 vs. TAIR10
Match: AT5G40250.1 (AT5G40250.1 RING/U-box superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 6.9e-25
Identity = 90/328 (27.44%), Postives = 143/328 (43.60%), Query Frame = 1


Query: 21  SPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLSALSGS 80
           SPP PP P S +     +SP++L ++ ILA   F SG+L L++R+L +      +A S S
Sbjct: 28  SPPSPPPPSSGN----RISPAVLFVIVILAVLFFISGLLHLLVRFLIKHP--SATASSRS 87

Query: 81  SSSSTVSSRRIIPAEQSAVRCTNSFSP----IESLPLFSFSSVTRRSSTAAA-------- 140
           +    +S+   +  +   +   N        I++LP+F +  +   +             
Sbjct: 88  NRFPEISTSDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPF 147

Query: 141 DCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA----------- 200
           DCAVCL +F  +D+LRLLP+C HAFH  C+DTWLQSN +CPLCR  +F+           
Sbjct: 148 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMENPMFD 207

Query: 201 -----------SESDVMKASMASYAAEGRGGDSFRL-------EIGS------ISRRQAP 260
                      +E+   K          +G    RL        +G+      ++  +  
Sbjct: 208 FDDIREDEEGVTENGSQKTMEIQEIVVEKGVLPVRLGKFKRLDNVGNGQGQDVVAGGETS 267

Query: 261 SDSAEGRRSYSIGSFEYFV-EEDSEVNFTNAH--RRSVSDKEDIEAPISAVSTERSLAAE 293
           S + + RR +S+GS++Y +   + +V F N    R    DKE  E   ++ S +      
Sbjct: 268 SSNLDARRCFSMGSYQYILGNSELKVPFANDRLPRLKPQDKES-EQTGNSSSEDNKKINT 327

[Close]

BLAST of Csa3G128900 vs. TAIR10
Match: AT4G30400.1 (AT4G30400.1 RING/U-box superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 8.4e-23
Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = 1


Query: 19  SSSPPPPPSPVSSHTSL---KNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLS 78
           SS P  PP  + S  +      +SPSIL+I+ IL+   F SG+L L++R+L         
Sbjct: 25  SSLPQEPPLSLRSSANFDLNSKISPSILLIIIILSIIFFISGLLHLLVRFLLTPSSRDRE 84

Query: 79  ALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSSTAAADCAVCLS 138
               + ++     +++     S V    SF  I++LP+F + S+    +    DCAVCL 
Sbjct: 85  DYFDNVTALQGQLQQLFHLHDSGV--DQSF--IDTLPVFHYKSIIGLKNYPF-DCAVCLC 144

Query: 139 KFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 181
           +FE ED+LRLLP C HAFH  C+DTWL S+ +CPLCRS++ +  S
Sbjct: 145 EFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLS 184

[Close]

BLAST of Csa3G128900 vs. TAIR10
Match: AT1G23980.1 (AT1G23980.1 RING/U-box superfamily protein)

HSP 1 Score: 101.7 bits (252), Expect = 9.3e-22
Identity = 67/228 (29.39%), Postives = 111/228 (48.68%), Query Frame = 1


Query: 21  SPPPPPSPVSSHTSLKN------------LSPSILIILTILAFTAFSSGILCLVLRYLNR 80
           SP   PSP++ +  L +            +SP IL I+ +L+   F   IL L++RY  +
Sbjct: 20  SPSSAPSPITLNHQLTDSSSSSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYLK 79

Query: 81  RCLLRLSALSGSSSSSTVSS---------RRIIPAEQSAVRCTNSFSPIESLPLFSFSSV 140
           +    LS+    S+ +   S         +++     S +      + I++LP+F +  +
Sbjct: 80  KKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGL----DQALIDALPVFLYKEI 139

Query: 141 TRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFA-- 200
             + +    DCAVCL +F  +D+LRLLP C HAFH  C+DTWL SN +CPLCR  +F+  
Sbjct: 140 --KGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGTLFSLG 199

Query: 201 SESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSI 226
            + +    +   +A +  GG         +S  Q P+++  G+R +S+
Sbjct: 200 HQFEYPDFNFGFFAGDDGGGGV------RVSPVQKPAENEIGKRVFSV 235

[Close]

BLAST of Csa3G128900 vs. NCBI nr
Match: gi|700201547|gb|KGN56680.1| (hypothetical protein Csa_3G128900 [Cucumis sativus])

HSP 1 Score: 667.5 bits (1721), Expect = 1.2e-188
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1


Query: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60
           MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC
Sbjct: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60

Query: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120
           LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT
Sbjct: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120

Query: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180
           RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES
Sbjct: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180

Query: 181 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 240
           DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF
Sbjct: 181 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 240

Query: 241 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 300
           TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG
Sbjct: 241 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 300

Query: 301 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV
Sbjct: 301 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339

[Close]

BLAST of Csa3G128900 vs. NCBI nr
Match: gi|778677680|ref|XP_004134365.2| (PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis sativus])

HSP 1 Score: 667.5 bits (1721), Expect = 1.2e-188
Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1


Query: 1   MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 60
           MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC
Sbjct: 41  MASPPTPPLPDDLAIGYFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILC 100

Query: 61  LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 120
           LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT
Sbjct: 101 LVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVT 160

Query: 121 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 180
           RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES
Sbjct: 161 RRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASES 220

Query: 181 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 240
           DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF
Sbjct: 221 DVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEEDSEVNF 280

Query: 241 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 300
           TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG
Sbjct: 281 TNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSG 340

Query: 301 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV
Sbjct: 341 RFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 379

[Close]

BLAST of Csa3G128900 vs. NCBI nr
Match: gi|659075688|ref|XP_008438276.1| (PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis melo])

HSP 1 Score: 617.1 bits (1590), Expect = 1.9e-173
Identity = 322/345 (93.33%), Postives = 330/345 (95.65%), Query Frame = 1


Query: 1   MASPPTPPLPDDL---AIGYFSSSPPPPPSPVSSH--TSLKNLSPSILIILTILAFTAFS 60
           MASPP PPLPDD    AI Y SSSPP P SPVSS   +SLKNLSPSILIILTILAFTAF+
Sbjct: 1   MASPPPPPLPDDFSGSAIDYVSSSPPLPQSPVSSSHSSSLKNLSPSILIILTILAFTAFA 60

Query: 61  SGILCLVLRYLNRRCLLRLSALSGSSSSSTVSSRRIIPAEQSAVRCTNSFSPIESLPLFS 120
           S ILCLVLRYLNRRCLLRLSA+SGSSSSS+VSSRRIIPAEQ+AVRCTNSFSPIESLPLFS
Sbjct: 61  SVILCLVLRYLNRRCLLRLSAVSGSSSSSSVSSRRIIPAEQTAVRCTNSFSPIESLPLFS 120

Query: 121 FSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAI 180
           FSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAI
Sbjct: 121 FSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAI 180

Query: 181 FASESDVMKASMASYAAEGR-GGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSFEYFVEE 240
           FASESDVMKASMASYAAEGR GGDSFRLEIGSISRRQAPSDS EGRRSYSIGSFEYFVEE
Sbjct: 181 FASESDVMKASMASYAAEGRGGGDSFRLEIGSISRRQAPSDSGEGRRSYSIGSFEYFVEE 240

Query: 241 DSEVNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRAL 300
           DSEVNFTNAHRRSVSDKEDIEAPISAVST+RSLAA+VGSGRNWLKDYVDRLSNSVSSRAL
Sbjct: 241 DSEVNFTNAHRRSVSDKEDIEAPISAVSTDRSLAADVGSGRNWLKDYVDRLSNSVSSRAL 300

Query: 301 SFRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           SFRGSGRFFTGSSRRSEVTVAGEWEQEN+RVGEEISELFRWFSGV
Sbjct: 301 SFRGSGRFFTGSSRRSEVTVAGEWEQENSRVGEEISELFRWFSGV 345

[Close]

BLAST of Csa3G128900 vs. NCBI nr
Match: gi|1009170531|ref|XP_015866250.1| (PREDICTED: E3 ubiquitin-protein ligase ATL4 [Ziziphus jujuba])

HSP 1 Score: 387.9 bits (995), Expect = 1.8e-104
Identity = 222/347 (63.98%), Postives = 258/347 (74.35%), Query Frame = 1


Query: 17  YFSSSPPPPPSPVSSHTSLKNLSPSILIILTILAFTAFSSGILCLVLRYLNRRCLLRLS- 76
           Y++S+   PP   S+ TS  NLSPSILII+ ILA T  +S  LCL+LR+LNRRCL  LS 
Sbjct: 26  YYNSTASSPPHHHSTSTSFSNLSPSILIIVLILAITFIASVSLCLLLRHLNRRCLRHLSQ 85

Query: 77  --ALSGSSSSSTV--------SSRRIIPAEQSAVRCTNSFSPIESLPLFSFSSVTRRSST 136
             + S SSSSSTV        S+RR+ P + +A       S I+SLPLF+FSSVTRRSS+
Sbjct: 86  SASSSFSSSSSTVIPLESHRISARRVSPEDPTA-------SLIDSLPLFTFSSVTRRSSS 145

Query: 137 ----AAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESD 196
               AAADCAVCLSKFE +DQLRLLPLCCHAFHA CVDTWLQSNQ+CPLCRS IFASE++
Sbjct: 146 SGAAAAADCAVCLSKFEPDDQLRLLPLCCHAFHALCVDTWLQSNQTCPLCRSPIFASETE 205

Query: 197 VMKASMASYAAE---GRGGDSFRLEIGSISRRQAPSDSAEG----RRSYSIGSFEYFVEE 256
           ++K+  A+   E   GR G SFRLEIGS+S RQ  S    G    RRSYSIGSFEY VE+
Sbjct: 206 ILKSLTAANTGENTSGRSGGSFRLEIGSVSGRQTESIGDGGGRDRRRSYSIGSFEYLVED 265

Query: 257 DSEVNFTNAHRRSVSDKEDIEAPISAVSTERSLAAEV--GSGRNWLKDYVDRLSNSVSSR 316
           DSEV+ +NAHRRSVSD++D   P   V  E SLA EV  GSGR+WLK+YVDRLS S+SSR
Sbjct: 266 DSEVSLSNAHRRSVSDQKDDGQPPGMVP-EESLAGEVAAGSGRSWLKEYVDRLSMSLSSR 325

Query: 317 ALSFRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           A SFR SGRFFTGSSR+SEVTVAGEW+ E  RVGEEISE+FRWFSGV
Sbjct: 326 AQSFRSSGRFFTGSSRQSEVTVAGEWDMEAARVGEEISEMFRWFSGV 364

[Close]

BLAST of Csa3G128900 vs. NCBI nr
Match: gi|643717276|gb|KDP28902.1| (hypothetical protein JCGZ_14673 [Jatropha curcas])

HSP 1 Score: 387.1 bits (993), Expect = 3.1e-104
Identity = 211/335 (62.99%), Postives = 255/335 (76.12%), Query Frame = 1


Query: 19  SSSPPPPPSPV--------SSHTS-LKNLSPSILIILTILAFTAFSSGILCLVLRYLNRR 78
           SSS P PPSP+         +HTS  +NL PSIL+I+ IL+ T   S  LCL+LR+LNRR
Sbjct: 35  SSSSPSPPSPLLPFNNNSEDAHTSPFQNLKPSILVIVLILSITFLLSISLCLLLRHLNRR 94

Query: 79  CLLRLSALSGSSSSS-TVSSRRIIPAEQSAVRCTN---SFSPIESLPLFSFSSVTRRSST 138
           CL  LS  S +S+++ T+++        S  R +    +FS I SLPLFSFSS+ RRS+T
Sbjct: 95  CLRHLSPTSHASTTAITITTSSASSTRHSTNRVSPESPAFSIINSLPLFSFSSIKRRSAT 154

Query: 139 AAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSCPLCRSAIFASESDVMKA 198
            + DCAVCLSKFE++DQLRLLPLCCHAFHA C+DTWLQSNQ+CPLCRS I ASESD+ KA
Sbjct: 155 TSGDCAVCLSKFESQDQLRLLPLCCHAFHAHCIDTWLQSNQTCPLCRSPIHASESDLFKA 214

Query: 199 SMASYAAEGRGGDSFRLEIGSISRRQAPSDSA-EGRRSYSIGSFEYFVEEDSEVNFTNAH 258
             +S   +G G +SFRLEIGSISRRQA SDSA E R SYS+GSFEY VEE+SEV  ++ H
Sbjct: 215 LSSSI--DGSGAESFRLEIGSISRRQAASDSAVETRGSYSVGSFEYVVEEESEVTMSHTH 274

Query: 259 RRSVSDKEDIEAPISAVSTERSLAAEVGSGRNWLKDYVDRLSNSVSSRALSFRGSGRFFT 318
           RRSVSDKE I AP+S    E +LA+EV SGR+WLKDYVDRLSN++SSRALSFR SGRFFT
Sbjct: 275 RRSVSDKE-IVAPVSPSCQEPNLASEVASGRSWLKDYVDRLSNTLSSRALSFRSSGRFFT 334

Query: 319 GSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 340
           GSSRRSE+   G+++ E NR+GEEISE+FRWFSGV
Sbjct: 335 GSSRRSEIGSVGDYDVEANRMGEEISEMFRWFSGV 366

The following BLAST results are available for this feature:

BLAST of Csa3G128900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL4_ARATH	1.7e-81	55.14	E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana GN=ATL4 PE=1 SV=1	[more]
ATL49_ARATH	2.6e-26	29.97	Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana GN=ATL49 PE=3 SV=1	[more]
ATL46_ARATH	1.2e-23	27.44	RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2 SV=1	[more]
ATL13_ARATH	1.5e-21	38.18	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2 SV=2	[more]
ATL47_ARATH	1.7e-20	29.39	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1	[more]

BLAST of Csa3G128900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3Z4_CUCSA	8.4e-189	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G128900 PE=4 SV=1	[more]
A0A067JYE0_JATCU	2.2e-104	62.99	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14673 PE=4 SV=1	[more]
A0A061DVX8_THECC	9.5e-100	62.23	Toxicos en levadura 4, putative OS=Theobroma cacao GN=TCM_005794 PE=4 SV=1	[more]
A0A0D2R0B8_GOSRA	1.3e-96	57.88	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G067900 PE=4 SV=1	[more]
W9R595_9ROSA	2.9e-96	58.01	E3 ubiquitin-protein ligase ATL4 OS=Morus notabilis GN=L484_008028 PE=4 SV=1	[more]

BLAST of Csa3G128900 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G60220.1	9.5e-83	55.14	TOXICOS EN LEVADURA 4	[more]
AT2G18650.1	1.5e-27	29.97	RING/U-box superfamily protein	[more]
AT5G40250.1	6.9e-25	27.44	RING/U-box superfamily protein	[more]
AT4G30400.1	8.4e-23	38.18	RING/U-box superfamily protein	[more]
AT1G23980.1	9.3e-22	29.39	RING/U-box superfamily protein	[more]

BLAST of Csa3G128900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201547\|gb\|KGN56680.1\|	1.2e-188	100.00	hypothetical protein Csa_3G128900 [Cucumis sativus]	[more]
gi\|778677680\|ref\|XP_004134365.2\|	1.2e-188	100.00	PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis sativus]	[more]
gi\|659075688\|ref\|XP_008438276.1\|	1.9e-173	93.33	PREDICTED: E3 ubiquitin-protein ligase ATL4 [Cucumis melo]	[more]
gi\|1009170531\|ref\|XP_015866250.1\|	1.8e-104	63.98	PREDICTED: E3 ubiquitin-protein ligase ATL4 [Ziziphus jujuba]	[more]
gi\|643717276\|gb\|KDP28902.1\|	3.1e-104	62.99	hypothetical protein JCGZ_14673 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G128900.1	Csa3G128900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 129..172 score: 9.9
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 130..171 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 130..172 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 128..175 score: 1.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 11..198 score: 6.1
None	No IPR available	PANTHER	PTHR14155:SF129	SUBFAMILY NOT NAMED	coord: 11..198 score: 6.1
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 109..178 score: 1.77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G128900	Cla021377	Watermelon (97103) v1	cuwmB233
Csa3G128900	MELO3C006269	Melon (DHL92) v3.5.1	cumeB236
Csa3G128900	Lsi05G018900	Bottle gourd (USVL1VR-Ls)	culsiB209
Csa3G128900	MELO3C006269.2	Melon (DHL92) v3.6.1	cumedB223
Csa3G128900	Cla97C05G083490	Watermelon (97103) v2	cuwmbB204
Csa3G128900	Bhi01G000116	Wax gourd	cuwgoB270
Csa3G128900	CSPI03G10300	Wild cucumber (PI 183967)	cpicuB120
Csa3G128900	Cucsa.256910	Cucumber (Gy14) v1	cgycuB366
Csa3G128900	CmaCh06G011770	Cucurbita maxima (Rimu)	cmacuB814
Csa3G128900	CmaCh14G019330	Cucurbita maxima (Rimu)	cmacuB253
Csa3G128900	CmoCh14G019880	Cucurbita moschata (Rifu)	cmocuB239
Csa3G128900	CmoCh06G012160	Cucurbita moschata (Rifu)	cmocuB806
Csa3G128900	Cp4.1LG08g02570	Cucurbita pepo (Zucchini)	cpecuB859
Csa3G128900	Cp4.1LG03g17650	Cucurbita pepo (Zucchini)	cpecuB609
Csa3G128900	CsGy3G010420	Cucumber (Gy14) v2	cgybcuB109
Csa3G128900	Carg14890	Silver-seed gourd	carcuB0644
Csa3G128900	Carg06330	Silver-seed gourd	carcuB0975

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G128900	Silver-seed gourd	carcuB0257
Csa3G128900	Silver-seed gourd	carcuB1093
Csa3G128900	Watermelon (97103) v2	cuwmbB185
Csa3G128900	Cucumber (Chinese Long) v2	cucuB088
Csa3G128900	Cucumber (Chinese Long) v2	cucuB089
Csa3G128900	Cucumber (Gy14) v1	cgycuB460
Csa3G128900	Cucurbita maxima (Rimu)	cmacuB357
Csa3G128900	Cucurbita moschata (Rifu)	cmocuB348
Csa3G128900	Watermelon (Charleston Gray)	cuwcgB181
Csa3G128900	Watermelon (Charleston Gray)	cuwcgB222
Csa3G128900	Watermelon (97103) v1	cuwmB187
Csa3G128900	Watermelon (97103) v1	cuwmB207
Csa3G128900	Cucurbita pepo (Zucchini)	cpecuB135
Csa3G128900	Bottle gourd (USVL1VR-Ls)	culsiB223
Csa3G128900	Bottle gourd (USVL1VR-Ls)	culsiB232
Csa3G128900	Cucumber (Gy14) v2	cgybcuB114
Csa3G128900	Cucumber (Gy14) v2	cgybcuB116