Csa3G118210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G118210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6566644 .. 6567033 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCTCCTCCCAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTTTGAGATTCTTCTTCTTCCTGTTCTTTTGA

mRNA sequence

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCTCCTCCCAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTTTGAGATTCTTCTTCTTCCTGTTCTTTTGA

Coding sequence (CDS)

ATGAAGAAAGGGGGCAGTAGCCAGGTGGGTGCAGTGGCACATAATGTCATCAAAGGCAATAAATCAATCAAACTCTACCCCAGATACAAGCTACGCCAATTACTGATGCCTGCCAACAAATGCCAATCCTTTTTTTTTTTTTTTGTTTATATTTATATTCCTTTAATTGACAAAACCAACTTGGATAAGCCACGCGTGACGATATACTCAATGCGATTCCCTTATTTTACTACCAAAATCTCCTCCTCCCAGTCTCTTTCTCTCTCTCTGAAAATCTCTCTCCAGTATCTTCAATCACAGCATGGGTTTTTTCCCTTAAATCTAGCAGAGCTAATTGGAGTTTCTTCCAATGAATCATTTTTGAGATTCTTCTTCTTCCTGTTCTTTTGA

Protein sequence

MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTNLDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESFLRFFFFLFF*
Homology
[Close]
BLAST of Csa3G118210 vs. TrEMBL
Match: A0A0A0L313_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118210 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 3.4e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60
           MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN
Sbjct: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60

Query: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120
           LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF
Sbjct: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120

Query: 121 LRFFFFLFF 130
           LRFFFFLFF
Sbjct: 121 LRFFFFLFF 129

[Close]
BLAST of Csa3G118210 vs. NCBI nr
Match: gi|700201252|gb|KGN56385.1| (hypothetical protein Csa_3G118210 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 4.9e-66
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1 

Query: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60
           MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN
Sbjct: 1   MKKGGSSQVGAVAHNVIKGNKSIKLYPRYKLRQLLMPANKCQSFFFFFVYIYIPLIDKTN 60

Query: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120
           LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF
Sbjct: 61  LDKPRVTIYSMRFPYFTTKISSSQSLSLSLKISLQYLQSQHGFFPLNLAELIGVSSNESF 120

Query: 121 LRFFFFLFF 130
           LRFFFFLFF
Sbjct: 121 LRFFFFLFF 129

The following BLAST results are available for this feature:
BLAST of Csa3G118210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L313_CUCSA3.4e-66100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118210 PE=4 SV=1[more]
BLAST of Csa3G118210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201252|gb|KGN56385.1|4.9e-66100.00hypothetical protein Csa_3G118210 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G118210.1Csa3G118210.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G118210Wax gourdcuwgoB284
Csa3G118210Cucumber (Gy14) v1cgycuB366
Csa3G118210Cucurbita maxima (Rimu)cmacuB253
Csa3G118210Cucurbita maxima (Rimu)cmacuB818
Csa3G118210Cucurbita maxima (Rimu)cmacuB830
Csa3G118210Cucurbita moschata (Rifu)cmocuB239
Csa3G118210Cucurbita moschata (Rifu)cmocuB806
Csa3G118210Melon (DHL92) v3.5.1cumeB236
Csa3G118210Watermelon (Charleston Gray)cuwcgB222
Csa3G118210Watermelon (97103) v1cuwmB233
Csa3G118210Cucurbita pepo (Zucchini)cpecuB609
Csa3G118210Cucurbita pepo (Zucchini)cpecuB862
Csa3G118210Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G118210Cucumber (Gy14) v2cgybcuB109
Csa3G118210Melon (DHL92) v3.6.1cumedB223
Csa3G118210Silver-seed gourdcarcuB1007
Csa3G118210Watermelon (97103) v2cuwmbB204