Csa3G073950 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G073950
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 3953571 .. 3954107 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATAAAGAAACCTCAAAGTGGCACCCTATGAGAAGGCCACGTAGATTGCCAACTTCATCCCCATTTCAACATTATTCATACTCAAAACTCTCCTTGATTAAACAGATGATTCTCACAGCCAACATAAAAATGAAGAAGATTGGTATTTTCCCCACAGCTTGTAGAAGCAATAATAATACTAATATGGGTATGACAAATCCATTCCAACTCGTTGCTTCTTATAGTTATAGCTCTATGTCTATGGCTGATTATTTCCCACCATCTCTTTTTCCACGCCGCTATGGCAAACCAAGTAAAGATGAAGCCGAGCACAGTGGTGGAGAGAGATCTAAGGCTGAACGAGCTCCGTCGACCGCGGAGGAGTTTAATAGAATGGCTACTGAAAAACAGTCGAAAGATCATCAGGAGGAGGAGGTTGATGCGGTTCATGGACGTGACAAATTCGCCAAAGAATCTGAAGCGGCCATGGAAAAAAGTCATGACCCTAATAATCACATAAACAAAGGGCCGAATTACCGGCCTTGTAGCTAA

mRNA sequence

ATGGCAAATAAAGAAACCTCAAAGTGGCACCCTATGAGAAGGCCACGTAGATTGCCAACTTCATCCCCATTTCAACATTATTCATACTCAAAACTCTCCTTGATTAAACAGATGATTCTCACAGCCAACATAAAAATGAAGAAGATTGGTATTTTCCCCACAGCTTGTAGAAGCAATAATAATACTAATATGGGTATGACAAATCCATTCCAACTCGTTGCTTCTTATAGTTATAGCTCTATGTCTATGGCTGATTATTTCCCACCATCTCTTTTTCCACGCCGCTATGGCAAACCAAGTAAAGATGAAGCCGAGCACAGTGGTGGAGAGAGATCTAAGGCTGAACGAGCTCCGTCGACCGCGGAGGAGTTTAATAGAATGGCTACTGAAAAACAGTCGAAAGATCATCAGGAGGAGGAGGTTGATGCGGTTCATGGACGTGACAAATTCGCCAAAGAATCTGAAGCGGCCATGGAAAAAAGTCATGACCCTAATAATCACATAAACAAAGGGCCGAATTACCGGCCTTGTAGCTAA

Coding sequence (CDS)

ATGGCAAATAAAGAAACCTCAAAGTGGCACCCTATGAGAAGGCCACGTAGATTGCCAACTTCATCCCCATTTCAACATTATTCATACTCAAAACTCTCCTTGATTAAACAGATGATTCTCACAGCCAACATAAAAATGAAGAAGATTGGTATTTTCCCCACAGCTTGTAGAAGCAATAATAATACTAATATGGGTATGACAAATCCATTCCAACTCGTTGCTTCTTATAGTTATAGCTCTATGTCTATGGCTGATTATTTCCCACCATCTCTTTTTCCACGCCGCTATGGCAAACCAAGTAAAGATGAAGCCGAGCACAGTGGTGGAGAGAGATCTAAGGCTGAACGAGCTCCGTCGACCGCGGAGGAGTTTAATAGAATGGCTACTGAAAAACAGTCGAAAGATCATCAGGAGGAGGAGGTTGATGCGGTTCATGGACGTGACAAATTCGCCAAAGAATCTGAAGCGGCCATGGAAAAAAGTCATGACCCTAATAATCACATAAACAAAGGGCCGAATTACCGGCCTTGTAGCTAA

Protein sequence

MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNNNTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPSTAEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS*
Homology
[Close]
BLAST of Csa3G073950 vs. TrEMBL
Match: A0A0A0L2C8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073950 PE=4 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 1.5e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 1   MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN 60
           MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN
Sbjct: 1   MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN 60

Query: 61  NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST 120
           NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST
Sbjct: 61  NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST 120

Query: 121 AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS 179
           AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS
Sbjct: 121 AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS 178

[Close]
BLAST of Csa3G073950 vs. NCBI nr
Match: gi|700200972|gb|KGN56105.1| (hypothetical protein Csa_3G073950 [Cucumis sativus])

HSP 1 Score: 370.2 bits (949), Expect = 2.1e-99
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 1 

Query: 1   MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN 60
           MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN
Sbjct: 1   MANKETSKWHPMRRPRRLPTSSPFQHYSYSKLSLIKQMILTANIKMKKIGIFPTACRSNN 60

Query: 61  NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST 120
           NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST
Sbjct: 61  NTNMGMTNPFQLVASYSYSSMSMADYFPPSLFPRRYGKPSKDEAEHSGGERSKAERAPST 120

Query: 121 AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS 179
           AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS
Sbjct: 121 AEEFNRMATEKQSKDHQEEEVDAVHGRDKFAKESEAAMEKSHDPNNHINKGPNYRPCS 178

The following BLAST results are available for this feature:
BLAST of Csa3G073950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2C8_CUCSA1.5e-99100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073950 PE=4 SV=1[more]
BLAST of Csa3G073950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200972|gb|KGN56105.1|2.1e-99100.00hypothetical protein Csa_3G073950 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G073950.1Csa3G073950.1mRNA