Csa3G063620 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G063620
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Polygalacturonase; contains IPR000743 (Glycoside hydrolase, family 28), IPR011050 (Pectin lyase fold/virulence factor)
Location	Chr3 : 3620005 .. 3620899 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTCAATAATGTCAATACTGCAAGTATCAAGAACATAAGCTCCTTCGACAGCAAATTCTTCCATTTTGCTGTGCATGCATCTCGTGATGTGACGTTTGATAACGTTACAGTGGTAGCTCCAGCAAACAGTCCCAACACAGATGGAATCCACATTTCAACGTCAAGTGGTATAAACATCATGCATTCGACAATCGGTACTGGAGATGATTGCATCTCATTGGGTCCTGGAAGCAAAATGATCAACATAAGTAACGTTCATTGTGGTCCTGGTCATGGAATTAGCATTGGTAGCCTTGGAAAGAACCCAAACGAAGAAGACGTCTTTGATGTCACAGTAAGAGACTCCACATTCATTGGCACATCCAACGGTGCGAGGATCAAATCATGGTCGTCTCCGTATTCCAGTATGGTTAGCAAGGTCACATTTCTCAATCTCCAAATGAACAATGTCAAAAACCCTATCATCATCGATCAAAGTTATTGTCCAGACTCTTGCGCTCCAAATAAAATGGTATAGTGTATAAGATAATTTAAGAGCATTAGTGTTATATATATAGCAAATTACAACGAATGTATACATATGAATTCTAAAGCAAAAGATTATGGTTTTTGTGGTTGGCAGAATAAATCAATGGTGCAGATTAAAGATGTGAGATATCAAGGCATAACGGGGAGTTCAAATACACCAGTGGCAGTAGATTTTGAATGCAGCCAAGTTCTTCCATGTCAAGGCATAGTGTTACAAGACATTAACCTTACTTTCAATGGTGGTGGGAAGACAACTTCCATTTGTCATAATGTTAAGGGTTCTGCATCTGGTCAACAATTACCTCCCTCTTGCCTTTAATTACTTTGTGTTCTTCTTTTCTTTTCTTCCTCACTACAGAGAG

mRNA sequence

ATGAAATTCAATAATGTCAATACTGCAAGTATCAAGAACATAAGCTCCTTCGACAGCAAATTCTTCCATTTTGCTGTGCATGCATCTCGTGATGTGACGTTTGATAACGTTACAGTGGTAGCTCCAGCAAACAGTCCCAACACAGATGGAATCCACATTTCAACGTCAAGTGGTATAAACATCATGCATTCGACAATCGGTACTGGAGATGATTGCATCTCATTGGGTCCTGGAAGCAAAATGATCAACATAAGTAACGTTCATTGTGGTCCTGGTCATGGAATTAGCATTGGTAGCCTTGGAAAGAACCCAAACGAAGAAGACGTCTTTGATGTCACAGTAAGAGACTCCACATTCATTGGCACATCCAACGGTGCGAGGATCAAATCATGGTCGTCTCCGTATTCCAGTATGGTTAGCAAGGTCACATTTCTCAATCTCCAAATGAACAATGTCAAAAACCCTATCATCATCGATCAAAGTTATTGTCCAGACTCTTGCGCTCCAAATAAAATGAATAAATCAATGGTGCAGATTAAAGATGTGAGATATCAAGGCATAACGGGGAGTTCAAATACACCAGTGGCAGTAGATTTTGAATGCAGCCAAGTTCTTCCATGTCAAGGCATAGTGTTACAAGACATTAACCTTACTTTCAATGGTGGTGGGAAGACAACTTCCATTTGTCATAATGTTAAGGGTTCTGCATCTGGTCAACAATTACCTCCCTCTTGCCTTTAA

Coding sequence (CDS)

ATGAAATTCAATAATGTCAATACTGCAAGTATCAAGAACATAAGCTCCTTCGACAGCAAATTCTTCCATTTTGCTGTGCATGCATCTCGTGATGTGACGTTTGATAACGTTACAGTGGTAGCTCCAGCAAACAGTCCCAACACAGATGGAATCCACATTTCAACGTCAAGTGGTATAAACATCATGCATTCGACAATCGGTACTGGAGATGATTGCATCTCATTGGGTCCTGGAAGCAAAATGATCAACATAAGTAACGTTCATTGTGGTCCTGGTCATGGAATTAGCATTGGTAGCCTTGGAAAGAACCCAAACGAAGAAGACGTCTTTGATGTCACAGTAAGAGACTCCACATTCATTGGCACATCCAACGGTGCGAGGATCAAATCATGGTCGTCTCCGTATTCCAGTATGGTTAGCAAGGTCACATTTCTCAATCTCCAAATGAACAATGTCAAAAACCCTATCATCATCGATCAAAGTTATTGTCCAGACTCTTGCGCTCCAAATAAAATGAATAAATCAATGGTGCAGATTAAAGATGTGAGATATCAAGGCATAACGGGGAGTTCAAATACACCAGTGGCAGTAGATTTTGAATGCAGCCAAGTTCTTCCATGTCAAGGCATAGTGTTACAAGACATTAACCTTACTTTCAATGGTGGTGGGAAGACAACTTCCATTTGTCATAATGTTAAGGGTTCTGCATCTGGTCAACAATTACCTCCCTCTTGCCTTTAA

Protein sequence

MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGINIMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFIGTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQLPPSCL*

Homology

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BLAST of Csa3G063620 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-59
Identity = 111/244 (45.49%), Postives = 161/244 (65.98%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           ++F+ +  A +++I+S +SK FH  V    D+TF +VTV AP  S NTDGIH+  S G+ 
Sbjct: 131 LRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVT 190

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I ++ I TGDDCIS+GPGS+ + I+ V+CGPGHGISIGSLG+  NE++V  +TV+  TF 
Sbjct: 191 ITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTFS 250

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQI 180
           GT NG R+K+W +      + +TF +L MNNV+NP+I+DQ YCP   C  ++   S +++
Sbjct: 251 GTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQC--SRQAPSRIKL 310

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG-GGKTTSICHNVKGSASG 240
            ++ +  I G+S   VAV   CS  +PC  + + +INL++ G GG  TS C NVK + SG
Sbjct: 311 SNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGAGGPATSTCSNVKPTFSG 370

Query: 241 QQLP 243
           +Q+P
Sbjct: 371 KQVP 372

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BLAST of Csa3G063620 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 2.2e-59
Identity = 117/247 (47.37%), Postives = 162/247 (65.59%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           + FN++  ++IK+I++ DSK FH  V+  +++TF    V APANSPNTDGIH+S SS +N
Sbjct: 144 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 203

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I  S   TGDDCIS+G  ++ + I+ V CGPGHGIS+GSLG NP+E+ V  V VR+ TF 
Sbjct: 204 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFT 263

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQI 180
            T NG RIK+W + +  +V+ V F ++ + NV NP++IDQ YCP + C  NK   S V+I
Sbjct: 264 NTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKC--NKDLPSQVKI 323

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG-GGKTTSICHNVKGSASG 240
             V +Q I G+S T  AV    S+ +PC+GI + DI++T++G  G   S C N+K S  G
Sbjct: 324 SKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPSLKG 383

Query: 241 QQLPPSC 246
           +Q PP C
Sbjct: 384 KQNPPVC 388

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BLAST of Csa3G063620 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.5e-58
Identity = 109/236 (46.19%), Postives = 156/236 (66.10%), Query Frame = 1


Query: 6   VNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGINIMHST 65
           VN   +  I+  +SKFFH  ++  +D+   +V V AP +SPNTDGIH+  SSG+ I ++ 
Sbjct: 169 VNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGVTITNTV 228

Query: 66  IGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFIGTSNG 125
           IG GDDCIS+GPG+  +NI+ V CGPGHGISIGSLG+  +E+DV D+ V+D T   T+NG
Sbjct: 229 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTANG 288

Query: 126 ARIKSWSSPYSSM-VSKVTFLNLQMNNVKNPIIIDQSYCPDS-CAPNKMNKSMVQIKDVR 185
            RIK++    S +  SK+ + N++M +   PIIID  YCP+  C  N  +K  V +KDV 
Sbjct: 289 VRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASK--VTVKDVT 348

Query: 186 YQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG-GGKTTSICHNVKGSASG 239
           ++ ITG+S+TP AV+  C+  +PC G+ + D+N+ ++G   KT ++C N KGSA G
Sbjct: 349 FKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNKTMAVCKNAKGSAKG 402

[Close]

BLAST of Csa3G063620 vs. Swiss-Prot
Match: PGLR5_ARATH (Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.5e-58
Identity = 118/247 (47.77%), Postives = 157/247 (63.56%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           + F+      ++N++  DS+  H A+ + R VT   + V+APA SPNTDGIHIS S GI 
Sbjct: 180 LTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISVSRGIV 239

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I ++T+ TGDDCIS+   S  I+ISN+ CGPGHGISIGSLGK+ + E+V D+TV  +   
Sbjct: 240 IDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVDTAIIS 299

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
            T+NG RIK+W    S +VSK+ F N++MNNV NPIIIDQ YC DS  P     S + I+
Sbjct: 300 DTANGVRIKTWQGG-SGLVSKIIFRNIKMNNVSNPIIIDQYYC-DSRKPCANQTSAISIE 359

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINL-TFNGGGKTTSICHNVKGSASGQ 240
           ++ +  + G+S +  A+   CS   PC+ I+LQDI+L   NG G T S C    GS+SGQ
Sbjct: 360 NISFVHVRGTSASKEAIKISCSDSSPCRNILLQDIDLEPSNGDGFTESFCWEAYGSSSGQ 419

Query: 241 QLPPSCL 247
             PP CL
Sbjct: 420 VYPPPCL 424

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BLAST of Csa3G063620 vs. Swiss-Prot
Match: PGLR_GOSHI (Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 7.2e-58
Identity = 113/246 (45.93%), Postives = 157/246 (63.82%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           ++F+ +  A I++I+S DSK FH  V A +++T + + + AP  SPNTDGIH+  S G+N
Sbjct: 152 IRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I+ S I TGDDCIS+G G+K + I  + CGPGHGISIGSLGK  NEE V  + + + T  
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTIT 271

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQI 180
            TSNGARIK+W   +   VS++ F ++ MNNV +PI+IDQ YCP + C  N+  +S V++
Sbjct: 272 NTSNGARIKTWPGEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNE--ESKVKL 331

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQ 240
            ++ ++ I G+S  P A+ F CS   PCQ + L DI++  NG    TS C NVK   SG+
Sbjct: 332 SNISFKNIRGTSALPEAIKFICSGSSPCQNVELADIDIKHNGAEPATSQCLNVKPITSGK 391

Query: 241 QLPPSC 246
             P  C
Sbjct: 392 LNPIPC 395

[Close]

BLAST of Csa3G063620 vs. TrEMBL
Match: A0A0A0L660_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063620 PE=3 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 8.9e-140
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN
Sbjct: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI
Sbjct: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK
Sbjct: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240
           DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ
Sbjct: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240

Query: 241 LPPSCL 247
           LPPSCL
Sbjct: 241 LPPSCL 246

[Close]

BLAST of Csa3G063620 vs. TrEMBL
Match: A0A0A0L7H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 5.8e-115
Identity = 203/247 (82.19%), Postives = 222/247 (89.88%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M+ N +N A I NI S++SK FHFA+H  RDVTFD+VTV+APANSPNTDGIHIS+SSGIN
Sbjct: 114 MRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGIN 173

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSK INI+N+ CGPGHGISIGSLGK PNEEDVF+VTVRDSTFI
Sbjct: 174 IMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFI 233

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNK-MNKSMVQI 180
           GTSNG RIK+WSS YSSMVSKVTFLNLQMNNVKNPIIIDQ+YCP SC   K M+KSMVQI
Sbjct: 234 GTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQI 293

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQ 240
           KDVRY+GI GSSNT VAVDFECS+V+PCQGIVLQDINL FNGGG+TTS CHNV+GSA G 
Sbjct: 294 KDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGH 353

Query: 241 QLPPSCL 247
           QLPPSCL
Sbjct: 354 QLPPSCL 360

[Close]

BLAST of Csa3G063620 vs. TrEMBL
Match: A0A061F588_THECC (Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_030754 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.5e-67
Identity = 130/252 (51.59%), Postives = 177/252 (70.24%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           ++F+ V  + I +I+S +SK FHF + AS ++    V + AP +SPNTDGIHI  S+GI+
Sbjct: 156 LRFDFVTNSWINHITSINSKNFHFNIFASTNIRIHQVNISAPGDSPNTDGIHIGDSTGIH 215

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I  S I TGDDC+S+GPGS+ INI+NVHCGPGHG S+GSLGK+PNE+DV  VTVR+ T  
Sbjct: 216 ISDSEIATGDDCVSMGPGSQNINITNVHCGPGHGFSVGSLGKSPNEKDVAGVTVRNCTLT 275

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GT NG RIK+WS  +SS  S VTF ++ + NV NPI IDQ+YCP S    +  +S V+I+
Sbjct: 276 GTLNGLRIKTWSPSHSSRCSDVTFEHVNVENVNNPIFIDQNYCP-SHKCGRQWESRVKIQ 335

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGG------KTTSICHNVKG 240
            VR++ I GSS++ +AV+ +CS+  PC+ I L++IN+ +NGGG         S C NV G
Sbjct: 336 GVRFRNIWGSSSSRIAVNLQCSRSTPCENIELRNINIDYNGGGGGATAAAAASSCSNVHG 395

Query: 241 SASGQQLPPSCL 247
            A G+Q PPSC+
Sbjct: 396 VAYGEQHPPSCM 406

[Close]

BLAST of Csa3G063620 vs. TrEMBL
Match: V4TPY2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023493mg PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 2.9e-66
Identity = 131/247 (53.04%), Postives = 170/247 (68.83%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M FN V  + I  I+S +SK  H +++    V+ DN+ + AP  SPNTDGI I  S GI 
Sbjct: 151 MVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIK 210

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I HS+IGTGDDCI+L  GS  IN+++V CGPGHGIS+GSLG+  NE +V  + VR+ TF 
Sbjct: 211 ITHSSIGTGDDCIALLSGSTNINVTDVSCGPGHGISVGSLGRYANERNVHGLAVRNCTFR 270

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GT+NG RIK+W+SP +++ S  TF N+ M+NV+NPI+IDQ YCP      K+  S VQIK
Sbjct: 271 GTTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKIT-SNVQIK 330

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG-GGKTTSICHNVKGSASGQ 240
           DV Y+ I G+S+T VAV+F+CS+  PC+ IVLQDI L  NG  G  TS C+ V G + G 
Sbjct: 331 DVTYRNIWGTSSTKVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVDGDSYGN 390

Query: 241 QLPPSCL 247
           Q PPSCL
Sbjct: 391 QKPPSCL 396

[Close]

BLAST of Csa3G063620 vs. TrEMBL
Match: A0A067E5M2_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040962mg PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 5.0e-66
Identity = 131/247 (53.04%), Postives = 170/247 (68.83%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M FN V  + I  I+S +SK  H +++    V+ DN+ + AP  SPNTDGI I  S GI 
Sbjct: 2   MVFNFVTNSRISGITSVNSKNAHISLYGCHKVSIDNIKITAPYQSPNTDGIKIGDSKGIK 61

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I HS+IGTGDDCI+L  GS  IN+++V CGPGHGIS+GSLG+  NE +V  + VR+ TF 
Sbjct: 62  ITHSSIGTGDDCIALLSGSTNINVTDVTCGPGHGISVGSLGRYANERNVHGLAVRNCTFR 121

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GT+NG RIK+W+SP +++ S  TF N+ M+NV+NPI+IDQ YCP      K+  S VQIK
Sbjct: 122 GTTNGVRIKTWASPQANVASGFTFENIFMSNVENPIVIDQMYCPHGSCNQKIT-SNVQIK 181

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG-GGKTTSICHNVKGSASGQ 240
           DV Y+ I G+S+T VAV+F+CS+  PC+ IVLQDI L  NG  G  TS C+ V G + G 
Sbjct: 182 DVTYRNIWGTSSTKVAVNFQCSKTFPCENIVLQDIYLVHNGRDGAATSSCNFVDGDSYGT 241

Query: 241 QLPPSCL 247
           Q PPSCL
Sbjct: 242 QKPPSCL 247

[Close]

BLAST of Csa3G063620 vs. TAIR10
Match: AT2G15450.1 (AT2G15450.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 1.9e-61
Identity = 120/250 (48.00%), Postives = 162/250 (64.80%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M F  VN ++IK+I+S +SK  HF   +        VT+ AP +SPNTDGI + + S I 
Sbjct: 154 MGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMGSCSNIQ 213

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I  + IGTGDDCI++  G+  +NISNV+CGPGHGIS+GSLGKN +E+DV D+ VRD  F 
Sbjct: 214 ISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIVRDVIFN 273

Query: 121 GTSNGARIKSWSSPYSS-MVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQ 180
           GTS+G RIK+W S  S  +VS   + N+QM +V  PI IDQ YCP   C   +  +S VQ
Sbjct: 274 GTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQ 333

Query: 181 IKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG--GGKTTSICHNVKGSA 240
           I++++ + I G+S   VAV+ +CS++ PC+ + L DIN+  NG   G +TS+C NV G A
Sbjct: 334 IQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVKDGSSTSVCENVDGFA 393

Query: 241 SGQQLPPSCL 247
            G+  PP CL
Sbjct: 394 RGKMFPPHCL 403

[Close]

BLAST of Csa3G063620 vs. TAIR10
Match: AT4G13760.1 (AT4G13760.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-60
Identity = 119/250 (47.60%), Postives = 164/250 (65.60%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M F  VN ++IK+I+S +SK  HF   +        VT+ AP NSPNTDGI + + S I+
Sbjct: 154 MGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIH 213

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I ++ IGTGDDCI++  G+  ++ISNV+CGPGHGIS+GSLGKN +E+DV D+T+RD  F 
Sbjct: 214 ISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTIRDVIFN 273

Query: 121 GTSNGARIKSWSSPYSS-MVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQ 180
           GTS+G RIK+W S  S  +VS   + N+QM +V  PI IDQ YCP   C   +  +S VQ
Sbjct: 274 GTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQ 333

Query: 181 IKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG--GGKTTSICHNVKGSA 240
           I++++ + I G+S   VAV+ +CS+  PC+ I L DIN+T NG     +T +C NV GS 
Sbjct: 334 IQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNGLVDSFSTLVCENVDGSV 393

Query: 241 SGQQLPPSCL 247
           SG+ +P  C+
Sbjct: 394 SGKMVPQHCI 403

[Close]

BLAST of Csa3G063620 vs. TAIR10
Match: AT3G07840.1 (AT3G07840.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 229.2 bits (583), Expect = 2.8e-60
Identity = 115/248 (46.37%), Postives = 161/248 (64.92%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           ++F+ V  A I++ISS D+K FH  V  ++++TFDNV V+APA SPNTDGIH+  S G+ 
Sbjct: 142 IRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGVK 201

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I++S I TGDDCIS+G G K +++ NV CGPGHGIS+GSLG+  +E+DV  +TV + T  
Sbjct: 202 ILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTLQ 261

Query: 121 GTSNGARIKSW-SSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQ 180
           GT NG RIK+W S+  ++  S + F N+ +NNV NPI+IDQ YCP + C  NK   S ++
Sbjct: 262 GTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQC--NKQKPSTIK 321

Query: 181 IKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGG-GKTTSICHNVKGSAS 240
           + D+ ++ I G+S    AV   CS+  PC  + + +INL + G  G  T +C NV     
Sbjct: 322 LVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKGADGPPTFMCSNVSPKLV 381

Query: 241 GQQLPPSC 246
           G Q P +C
Sbjct: 382 GTQNPKAC 387

[Close]

BLAST of Csa3G063620 vs. TAIR10
Match: AT2G43880.1 (AT2G43880.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 228.4 bits (581), Expect = 4.8e-60
Identity = 118/246 (47.97%), Postives = 154/246 (62.60%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           + F+  N   +  +SSF+S+  H  VH S +V  +NV + AP+ SPNTDGIH+ +SSG+ 
Sbjct: 151 ISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVRIRAPSGSPNTDGIHVQSSSGVT 210

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           I   TI TGDDCI+L  GS+ I I  V+CGPGHGISIGSLG   NEE V +VTV  S F 
Sbjct: 211 ISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIGSLGDYANEEGVQNVTVTSSVFT 270

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
            T NG RIK+W+ P    V+ V F NL MNNV+NP+IIDQ+YCP+     + + S V+I 
Sbjct: 271 KTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVIIDQNYCPNGKGCPRQS-SGVKIS 330

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240
            V +  I G+S TP+A+  +CS    C G+ LQDI LT+     + S C N  G ASG  
Sbjct: 331 GVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTYM-RRSSASYCRNAHGRASGVM 390

Query: 241 LPPSCL 247
           +P +C+
Sbjct: 391 VPRNCM 394

[Close]

BLAST of Csa3G063620 vs. TAIR10
Match: AT1G65570.1 (AT1G65570.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 228.0 bits (580), Expect = 6.3e-60
Identity = 114/247 (46.15%), Postives = 160/247 (64.78%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           ++F + N   IK + S +S+ FH A++  R++  ++V ++AP  SPNTDGIHI  S+ I 
Sbjct: 154 LRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQLSTDIE 213

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           + +++I TGDDCIS+GPG+K + +  + CGPGHGISIGSL K+  E+ V +VTV+++ F+
Sbjct: 214 VRNASIKTGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTVKNAVFV 273

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCP-DSCAPNKMNKSMVQI 180
            T NG RIKSW    +  V +V FL   M NV  PI+IDQ+YCP DS  P++  +S ++I
Sbjct: 274 RTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILIDQNYCPGDSSCPSQ--ESGIKI 333

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQ 240
            DV Y GI G+S T +A+  +CS+ +PC GI +Q INLT  G    TS C NV G   G 
Sbjct: 334 NDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSYGEAAKTS-CTNVSGKQLGL 393

Query: 241 QLPPSCL 247
             P  CL
Sbjct: 394 VTPSGCL 397

[Close]

BLAST of Csa3G063620 vs. NCBI nr
Match: gi|449463753|ref|XP_004149596.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN
Sbjct: 104 MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 163

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI
Sbjct: 164 IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 223

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK
Sbjct: 224 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 283

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240
           DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ
Sbjct: 284 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 343

Query: 241 LPPSCL 247
           LPPSCL
Sbjct: 344 LPPSCL 349

[Close]

BLAST of Csa3G063620 vs. NCBI nr
Match: gi|700200929|gb|KGN56062.1| (hypothetical protein Csa_3G063620 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN
Sbjct: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI
Sbjct: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK
Sbjct: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240
           DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ
Sbjct: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240

Query: 241 LPPSCL 247
           LPPSCL
Sbjct: 241 LPPSCL 246

[Close]

BLAST of Csa3G063620 vs. NCBI nr
Match: gi|700200928|gb|KGN56061.1| (hypothetical protein Csa_3G063610 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 8.4e-115
Identity = 203/247 (82.19%), Postives = 222/247 (89.88%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M+ N +N A I NI S++SK FHFA+H  RDVTFD+VTV+APANSPNTDGIHIS+SSGIN
Sbjct: 114 MRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGIN 173

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSK INI+N+ CGPGHGISIGSLGK PNEEDVF+VTVRDSTFI
Sbjct: 174 IMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFI 233

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNK-MNKSMVQI 180
           GTSNG RIK+WSS YSSMVSKVTFLNLQMNNVKNPIIIDQ+YCP SC   K M+KSMVQI
Sbjct: 234 GTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKSMVQI 293

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQ 240
           KDVRY+GI GSSNT VAVDFECS+V+PCQGIVLQDINL FNGGG+TTS CHNV+GSA G 
Sbjct: 294 KDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGH 353

Query: 241 QLPPSCL 247
           QLPPSCL
Sbjct: 354 QLPPSCL 360

[Close]

BLAST of Csa3G063620 vs. NCBI nr
Match: gi|778688362|ref|XP_011652730.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 420.6 bits (1080), Expect = 1.9e-114
Identity = 203/247 (82.19%), Postives = 221/247 (89.47%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           M+ N +N A I NI S++SK FHFA+H  RDVTFD+VTV+APANSPNTDGIHIS+SSGIN
Sbjct: 114 MRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSSSGIN 173

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSK INI+N+ CGPGHGISIGSLGK PNEEDVF+VTVRDSTFI
Sbjct: 174 IMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFI 233

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKM-NKSMVQI 180
           GTSNG RIK+WSS YSSMVSKVTFLNLQMNNVKNPIIIDQ+YCP SC   KM  KSMVQI
Sbjct: 234 GTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMVYKSMVQI 293

Query: 181 KDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQ 240
           KDVRY+GI GSSNT VAVDFECS+V+PCQGIVLQDINL FNGGG+TTS CHNV+GSA G 
Sbjct: 294 KDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNGGGRTTSNCHNVRGSAFGH 353

Query: 241 QLPPSCL 247
           QLPPSCL
Sbjct: 354 QLPPSCL 360

[Close]

BLAST of Csa3G063620 vs. NCBI nr
Match: gi|659096624|ref|XP_008449197.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 413.7 bits (1062), Expect = 2.3e-112
Identity = 199/246 (80.89%), Postives = 218/246 (88.62%), Query Frame = 1


Query: 1   MKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTSSGIN 60
           MK   +N A I NI S++SK FHFAVH  RDVTFD+VTV+APANSPNTDGIH+S SSGIN
Sbjct: 112 MKLTGINNARISNIKSYNSKLFHFAVHGCRDVTFDHVTVIAPANSPNTDGIHVSLSSGIN 171

Query: 61  IMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRDSTFI 120
           IMHSTIGTGDDCISLGPGSK INI+NV CGPGHGISIGSLGK PNEEDVF+VTVRDSTF+
Sbjct: 172 IMHSTIGTGDDCISLGPGSKFINITNVQCGPGHGISIGSLGKYPNEEDVFEVTVRDSTFL 231

Query: 121 GTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMNKSMVQIK 180
           GT+NGARIK+WSS YS+MVSKVTFLNLQMNNVKNPIIIDQSYCP SC   + ++S VQIK
Sbjct: 232 GTTNGARIKTWSSSYSNMVSKVTFLNLQMNNVKNPIIIDQSYCPHSC--GRQSQSKVQIK 291

Query: 181 DVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNGGGKTTSICHNVKGSASGQQ 240
           DVRY+GI GSSNT VAVDFECSQV PCQGIVLQDINL FNGGG+TT+ CHNV+GSA G Q
Sbjct: 292 DVRYEGIRGSSNTQVAVDFECSQVFPCQGIVLQDINLPFNGGGRTTANCHNVRGSAFGHQ 351

Query: 241 LPPSCL 247
           LPPSCL
Sbjct: 352 LPPSCL 355

The following BLAST results are available for this feature:

BLAST of Csa3G063620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PGLR2_PLAAC	1.0e-59	45.49	Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1	[more]
PGLR_TOBAC	2.2e-59	47.37	Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1	[more]
PGLR3_MAIZE	2.5e-58	46.19	Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1	[more]
PGLR5_ARATH	5.5e-58	47.77	Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana GN=At1g80170 PE=1 S...	[more]
PGLR_GOSHI	7.2e-58	45.93	Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1	[more]

BLAST of Csa3G063620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L660_CUCSA	8.9e-140	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063620 PE=3 SV=1	[more]
A0A0A0L7H9_CUCSA	5.8e-115	82.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G063610 PE=3 SV=1	[more]
A0A061F588_THECC	4.5e-67	51.59	Pectin lyase-like superfamily protein, putative OS=Theobroma cacao GN=TCM_030754...	[more]
V4TPY2_9ROSI	2.9e-66	53.04	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023493mg PE=3 SV=1	[more]
A0A067E5M2_CITSI	5.0e-66	53.04	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g040962mg PE=3 S...	[more]

BLAST of Csa3G063620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15450.1	1.9e-61	48.00	Pectin lyase-like superfamily protein	[more]
AT4G13760.1	2.8e-60	47.60	Pectin lyase-like superfamily protein	[more]
AT3G07840.1	2.8e-60	46.37	Pectin lyase-like superfamily protein	[more]
AT2G43880.1	4.8e-60	47.97	Pectin lyase-like superfamily protein	[more]
AT1G65570.1	6.3e-60	46.15	Pectin lyase-like superfamily protein	[more]

BLAST of Csa3G063620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463753\|ref\|XP_004149596.1\|	1.3e-139	100.00	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
gi\|700200929\|gb\|KGN56062.1\|	1.3e-139	100.00	hypothetical protein Csa_3G063620 [Cucumis sativus]	[more]
gi\|700200928\|gb\|KGN56061.1\|	8.4e-115	82.19	hypothetical protein Csa_3G063610 [Cucumis sativus]	[more]
gi\|778688362\|ref\|XP_011652730.1\|	1.9e-114	82.19	PREDICTED: exopolygalacturonase-like [Cucumis sativus]	[more]
gi\|659096624\|ref\|XP_008449197.1\|	2.3e-112	80.89	PREDICTED: exopolygalacturonase-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000743	Glyco_hydro_28
IPR006626	PbH1
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0004650	polygalacturonase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005975	carbohydrate metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071555	cell wall organization
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0045490	pectin catabolic process
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0019814	immunoglobulin complex
molecular_function	GO:0004650	polygalacturonase activity
molecular_function	GO:0047911	galacturan 1,4-alpha-galacturonidase activity
molecular_function	GO:0019863	IgE binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU163540	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G063620.1	Csa3G063620.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU163540	CU163540	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 1..236 score: 3.1
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 86..99 scor
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 56..77 score: 4700.0coord: 139..160 score: 8500.0coord: 29..55 score: 8.3coord: 109..130 score: 15.0coord: 79..99 score: 80
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 2..246 score: 6.29
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 2..245 score: 4.6
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 1..246 score: 6.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G063620	CmoCh16G009650	Cucurbita moschata (Rifu)	cmocuB315

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G063620	Watermelon (97103) v2	cuwmbB181
Csa3G063620	Wax gourd	cuwgoB218
Csa3G063620	Cucumber (Gy14) v1	cgycuB014
Csa3G063620	Cucurbita maxima (Rimu)	cmacuB019
Csa3G063620	Cucurbita maxima (Rimu)	cmacuB327
Csa3G063620	Cucurbita maxima (Rimu)	cmacuB820
Csa3G063620	Cucurbita moschata (Rifu)	cmocuB010
Csa3G063620	Cucurbita moschata (Rifu)	cmocuB811
Csa3G063620	Melon (DHL92) v3.5.1	cumeB243
Csa3G063620	Watermelon (Charleston Gray)	cuwcgB189
Csa3G063620	Watermelon (97103) v1	cuwmB194
Csa3G063620	Cucurbita pepo (Zucchini)	cpecuB213
Csa3G063620	Cucurbita pepo (Zucchini)	cpecuB781
Csa3G063620	Bottle gourd (USVL1VR-Ls)	culsiB198
Csa3G063620	Cucumber (Gy14) v2	cgybcuB109
Csa3G063620	Melon (DHL92) v3.6.1	cumedB224
Csa3G063620	Silver-seed gourd	carcuB0517
Csa3G063620	Silver-seed gourd	carcuB0614
Csa3G063620	Silver-seed gourd	carcuB0921