Csa3G005560 (gene) Cucumber (Chinese Long) v2

NameCsa3G005560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionReplication protein A 70 kDa DNA-binding subunit; contains IPR001878 (Zinc finger, CCHC-type), IPR004591 (Replication factor-a protein 1 Rpa1)
LocationChr3 : 702021 .. 706346 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACTTTCTCTCTAGGGTTTTAAACTTTTTGTAACTCATTTTCTCTAATCTCTCGTTTCCTGTCGATTCCACATTCTCGGATTCAATTCCCATTCCTTCGATTGAAGTTTTAATCTTCCAAGGAAAAAAAAAACTAAATTCTTTGCTGGGGTGTTCGAGTTTCGTTACCATTTCTTGAAATGGCAGCGTCAATGGCGTCGTCTAAGCTAACGGAAGGAGCAGTGATGGTGATATGCAAGAGGGAATCGTCTGCTGAGACGTTCCAGCCGATTCTACAAGTGATTGATTTGAAATTGGTTAACACTTCGCAACAATCAGGTAGCGAGAGGTTCAGATTGTTGGTTTCTGATGGAACCCATTTCCAGCAAGGAATGCTGGGCACTCAGCTCAACGAATTGGTTAAGTCTGGGAAGTTACAGAAAGGTTCTATCGTTCGACTGCGGCAGTATGTTTGTAACCCCGTTCAAGAACGCCTGTAAGTCTTTCTGATAAACTGAATCTGTTAAAGTTCGATATTTGTTTGCTTTTTGGACAGAAGATTGTTTGGAATCGGCGTGTAGTTTAAAGTGATGGAAGCTAGTGTTCCATTATTTAAATTTCGAAATTTGATTGCTGGGAACTACTTGAGTGCAGATTGTGTGTATATTTGAAGTTTACTTCTCTTTTCATTTTGGCATCTTTCTTTCTTTTGTTTTCTGATGATAAGATATAAGCCATATCAGTTATGAAAAATAGGAGCAAAGCAGATAGGAAATCTCTCCTCGTTGATTTCTTTTCATTATATCCTGTGCTTCCTAACTTTTAAAGCTAGGGACTAGATGAAGAGTGTGGATTTTCTCTTTTGAGAGACTCCACTAAAAGAATCACCCTTGTGATTTATTTCTCCAATATTCGAGAAGATACTTTGAGAGAAGATCGAGAAGGAAAATTTTATTGAATGACCATCCCAGATTACGAATAATCTATGCTGTATGATCATCATTGTAGTTCAAAACCACCACTCAATTTCTATTGCTTCAATGATCAATATCTTCCTTAAGTTTGCTAGGAAAACAACGTTAGGATGTAAAATGTCAACCAGGGAGTGAAAGGCTCGTCTGTTTTCACAAAACTTGATTTTCAATCCATCACGTAACACTTGCAAGGGCCCTTCTCCATCATCGTGTATTTAAACATAGTAGATCAAGTGCCCCTTGATGAACCTGCTAAGAAATTTGCTAGTGGATCAACCCTATTGTATAATTGCCATCAATACCATGCCTACTTTTTTTCAACCTCTCAAGTAAATCTCCTCTTCCATTTTTAAAGATAAGAAACGTCTTTATTTTAAGTTTCTAACCCAGATGAACCATTCTGGGTTTATTCTTTTGTTGTTTGTTGATGTCTAACGTTCAATTGTTAGTGTACAATTTTCCTGAAGAGTTTCGTGAGCATTTCTTCTATTAAGTATTACGGCCTTAAAGGTTGTTTATTCAACTGAGTCTACAAAAAAACACATGTATCAAGGTTGTTTTACTGTTTCCTTTTTGAATGCTACCGAGTTTGCCTTTGAAGAGATGATTTATTGCTGATCCATAATTATATATATTGCTCCTTGTTTGTGCTCTCTTACTCTTCTTTATATTAATTTTTTGGGGGGAGGTAATATTTTACATTCTTTGTATAACTTGTTAATTTTCAACCACAGGATTATAATTGTCATTGAGTTGGATGTGATAGAGGAAATGTGTGACATTATTGGTGAACCTGTATCAGCCACAAGATCGTCAGCTAATGCATTAAGTGGAAACCCCCTACCCTCTGTGGGGGGTCTGGGGGCTTCACCTGGTAGTGGAATGATTGGTAAGGGAAATGTATCGAGTGCGTCTTTTGAACAGCCTAAAGTGAATCAATCACATGTACCACACATGGGATCTTATTCTAATCCTCCTGAGACTGGAAGATTCTCTGCATCAATTGCGCCTCCTTCTTACTCTAAGACAGATTCTGGATCAAGATTTAATGGGCCATCTCCTTTAACTGGATCATATGGTGATCAGAAGATGGCATATCACAACAGCGGGTCAGATATTCCCAGGCCACCTCTAAATTCTAATGCCTATGCCCGTCCTCAGCCAATATATCAGCAGCCTCCTTCAATGTACAGTAACAGAGGACCAATAGCAAAAAATGAAGCTGCCCCAAGGATAATGCCTATTTCTGCTCTGAACCCTTACCAAGGTAGGTGGACAATAAAGGCTCGAGTTACTTCAAAAGGAGAACTTAGACACTACAACAATCCTCGTGGTGACGGGAAAGTATTTTCATTTGATTTACTCGATGCTTACCGTGGAGAAATACGAGTAACATGCTTCAATACAGTAGCTGATCAGTTTTACAACCAAATTGAATCTGGTAAAGTCTACTTCATTTCTAAAGGAAGCCTGAAACCTGCTCAAAAGAACTTTAACCATCTCAAAAATGACTATGAAATATTTCTTGAAAACACATCAACAATCCAACCTTGCTTTGAGGATGACCAATCAATCCCCCAGCAGCAGTTTCATTTCCATCAGATTGGTGAGATTGAAGGCATGGACAGCAACAGTGTTGTAGATGTAATTGGTGTTGTTTCTTCCATTAATCCTGCAACTTCTTTGATGAGAAAAAATGGTACTGAGACTCAGAAGAGATCCCTTCAGTTGAAAGATATGTCTGGCCGAAGTGTTGAATTGACTCTTTGGGGGAACTTCTGTCAAGCGGAAGGGCAAAGATTGCAAAATATGTGTGACTCGGGGTTGTTCCCAGTTTTGGCCGTGAAATCTAGTAGAGTAAGCGACTTCAATGGGAAGGCAGTGGGAACCATTTCAACAAGTCAGCTCTTTATAGAGCCAGATTTCCCCGAGGCTCATTCACTGAGAGAGTGGTTTGAAAGGGAAGGGAGGAGTACTCTTTCTGTCTCTATATCCAGGGAAGTTGCTAGTGTGGGTAGGACAGATGTCAGGAAGACCATATCTCAAATTAAAGATGAGAGGTTAGGAACCTCTGAGAAGCCAGATTGGATCACGGTTAGTGCAACTGTTTCATTTATTAAGGTTGACAGTTTCTGCTACACAGCATGTCCTATCATGATCGGGGACCGACAATGTAGCAAAAAAGTTACAAATAATGGAGATGGAAAATGGAGATGTGACAGGTGTGATCAGTCTGTTGACGAATGTGACTACAGGTACATACTCCAGCTGCAAATACAGGATCATACTGGCTTAACTTGGGTAACTGCCTTTCAAGAAGGTGGTGAGGAGATCATGGGCATACCTGCAAAAAGATTGTATTATTTGAAGTATGAAGAGCAAGATGATGAGAAATTTGCAGAAATCATCCGGAAGGTTCTTTTTACAAAATTTATAATGAAGTTGAAAATAAAGGAAGAGACTTTTAGTGATGAACAGAGAGTAAGATCAACAGTGGTAAAAGCAGAAAGCATTAATTTTTCAAGCGAATCCAGGTTTCTTCTAAATTTGATGGAAAAACTCAAGCCAGAGAACAGTAGTTCTGCTACCCCAAAAGCAGAAAGCACCATACATAATTTCGGTTTTCGTGACACTGCTTCTGAAAATATTGGTGGTGGACAGTTCGTGTCACCCATTCGAAATAGTACCAATTTCAGCAGAGAATATGGTACACCCAACCAAGGTGTTCAGTATGGGAACCAGTACAGTAGCTCTAGGCCTTCTCCATCCACACCGCTTAACTCGAACACATACTGCAACAGCTGTGGGGGTTCTGGCCACAGCTCAACGAACTGCCCGAGTATCATGAGTGGTCCTGCACTGTCTGTTGGAGGTGGGATGTATTCAAATCAAGCTTCTGGCCCTTCGGGTGGTACCTCCGGTGAATGCTTCAAATGCCATCAAACTGGGCATTGGGCTAGGGATTGCCCTGGCTTGGCCAATGTCCCTCCAGCTTATGGTAACCGTGGCTTCACGGCTAGGTGATGCTCAGGGAAGTTCCTAATTTCTCTGAATGACTAGTTTCCATTTTCCTTTTCCTTTCATTTAAAAGAGATATTGCATGCATAGCGCCAATGTGGAAAGCTTTGCTTGCCATCTCGAGCGCTTAGTTCATGAAATTTTCTTGTACAGATGTTGCTTGGGAACTGTGTTTTGGATCTTAGATGATCTGTAAGCATAGGTTTTAGTCTACTTGTTTCTTTCGTCCTTTTCTTTTGATGGCTGCGTTTATATCTGGATAAATTATTGTATCCTTTGTACACTTTAAGTTTTCTTTTGCATGTATCTTTTTTCTTTTCGTTAGTTTCTTTATGGTAAATAGTTTAGTCAGCC

mRNA sequence

ATGGCAGCGTCAATGGCGTCGTCTAAGCTAACGGAAGGAGCAGTGATGGTGATATGCAAGAGGGAATCGTCTGCTGAGACGTTCCAGCCGATTCTACAAGTGATTGATTTGAAATTGGTTAACACTTCGCAACAATCAGGTAGCGAGAGGTTCAGATTGTTGGTTTCTGATGGAACCCATTTCCAGCAAGGAATGCTGGGCACTCAGCTCAACGAATTGGTTAAGTCTGGGAAGTTACAGAAAGGTTCTATCGTTCGACTGCGGCAGTATGTTTGTAACCCCGTTCAAGAACGCCTGATTATAATTGTCATTGAGTTGGATGTGATAGAGGAAATGTGTGACATTATTGGTGAACCTGTATCAGCCACAAGATCGTCAGCTAATGCATTAAGTGGAAACCCCCTACCCTCTGTGGGGGGTCTGGGGGCTTCACCTGGTAGTGGAATGATTGGTAAGGGAAATGTATCGAGTGCGTCTTTTGAACAGCCTAAAGTGAATCAATCACATGTACCACACATGGGATCTTATTCTAATCCTCCTGAGACTGGAAGATTCTCTGCATCAATTGCGCCTCCTTCTTACTCTAAGACAGATTCTGGATCAAGATTTAATGGGCCATCTCCTTTAACTGGATCATATGGTGATCAGAAGATGGCATATCACAACAGCGGGTCAGATATTCCCAGGCCACCTCTAAATTCTAATGCCTATGCCCGTCCTCAGCCAATATATCAGCAGCCTCCTTCAATGTACAGTAACAGAGGACCAATAGCAAAAAATGAAGCTGCCCCAAGGATAATGCCTATTTCTGCTCTGAACCCTTACCAAGGTAGGTGGACAATAAAGGCTCGAGTTACTTCAAAAGGAGAACTTAGACACTACAACAATCCTCGTGGTGACGGGAAAGTATTTTCATTTGATTTACTCGATGCTTACCGTGGAGAAATACGAGTAACATGCTTCAATACAGTAGCTGATCAGTTTTACAACCAAATTGAATCTGGTAAAGTCTACTTCATTTCTAAAGGAAGCCTGAAACCTGCTCAAAAGAACTTTAACCATCTCAAAAATGACTATGAAATATTTCTTGAAAACACATCAACAATCCAACCTTGCTTTGAGGATGACCAATCAATCCCCCAGCAGCAGTTTCATTTCCATCAGATTGGTGAGATTGAAGGCATGGACAGCAACAGTGTTGTAGATGTAATTGGTGTTGTTTCTTCCATTAATCCTGCAACTTCTTTGATGAGAAAAAATGGTACTGAGACTCAGAAGAGATCCCTTCAGTTGAAAGATATGTCTGGCCGAAGTGTTGAATTGACTCTTTGGGGGAACTTCTGTCAAGCGGAAGGGCAAAGATTGCAAAATATGTGTGACTCGGGGTTGTTCCCAGTTTTGGCCGTGAAATCTAGTAGAGTAAGCGACTTCAATGGGAAGGCAGTGGGAACCATTTCAACAAGTCAGCTCTTTATAGAGCCAGATTTCCCCGAGGCTCATTCACTGAGAGAGTGGTTTGAAAGGGAAGGGAGGAGTACTCTTTCTGTCTCTATATCCAGGGAAGTTGCTAGTGTGGGTAGGACAGATGTCAGGAAGACCATATCTCAAATTAAAGATGAGAGGTTAGGAACCTCTGAGAAGCCAGATTGGATCACGGTTAGTGCAACTGTTTCATTTATTAAGGTTGACAGTTTCTGCTACACAGCATGTCCTATCATGATCGGGGACCGACAATGTAGCAAAAAAGTTACAAATAATGGAGATGGAAAATGGAGATGTGACAGGTGTGATCAGTCTGTTGACGAATGTGACTACAGGTACATACTCCAGCTGCAAATACAGGATCATACTGGCTTAACTTGGGTAACTGCCTTTCAAGAAGGTGGTGAGGAGATCATGGGCATACCTGCAAAAAGATTGTATTATTTGAAGTATGAAGAGCAAGATGATGAGAAATTTGCAGAAATCATCCGGAAGGTTCTTTTTACAAAATTTATAATGAAGTTGAAAATAAAGGAAGAGACTTTTAGTGATGAACAGAGAGTAAGATCAACAGTGGTAAAAGCAGAAAGCATTAATTTTTCAAGCGAATCCAGGTTTCTTCTAAATTTGATGGAAAAACTCAAGCCAGAGAACAGTAGTTCTGCTACCCCAAAAGCAGAAAGCACCATACATAATTTCGGTTTTCGTGACACTGCTTCTGAAAATATTGGTGGTGGACAGTTCGTGTCACCCATTCGAAATAGTACCAATTTCAGCAGAGAATATGGTACACCCAACCAAGGTGTTCAGTATGGGAACCAGTACAGTAGCTCTAGGCCTTCTCCATCCACACCGCTTAACTCGAACACATACTGCAACAGCTGTGGGGGTTCTGGCCACAGCTCAACGAACTGCCCGAGTATCATGAGTGGTCCTGCACTGTCTGTTGGAGGTGGGATGTATTCAAATCAAGCTTCTGGCCCTTCGGGTGGTACCTCCGGTGAATGCTTCAAATGCCATCAAACTGGGCATTGGGCTAGGGATTGCCCTGGCTTGGCCAATGTCCCTCCAGCTTATGGTAACCGTGGCTTCACGGCTAGGTGA

Coding sequence (CDS)

ATGGCAGCGTCAATGGCGTCGTCTAAGCTAACGGAAGGAGCAGTGATGGTGATATGCAAGAGGGAATCGTCTGCTGAGACGTTCCAGCCGATTCTACAAGTGATTGATTTGAAATTGGTTAACACTTCGCAACAATCAGGTAGCGAGAGGTTCAGATTGTTGGTTTCTGATGGAACCCATTTCCAGCAAGGAATGCTGGGCACTCAGCTCAACGAATTGGTTAAGTCTGGGAAGTTACAGAAAGGTTCTATCGTTCGACTGCGGCAGTATGTTTGTAACCCCGTTCAAGAACGCCTGATTATAATTGTCATTGAGTTGGATGTGATAGAGGAAATGTGTGACATTATTGGTGAACCTGTATCAGCCACAAGATCGTCAGCTAATGCATTAAGTGGAAACCCCCTACCCTCTGTGGGGGGTCTGGGGGCTTCACCTGGTAGTGGAATGATTGGTAAGGGAAATGTATCGAGTGCGTCTTTTGAACAGCCTAAAGTGAATCAATCACATGTACCACACATGGGATCTTATTCTAATCCTCCTGAGACTGGAAGATTCTCTGCATCAATTGCGCCTCCTTCTTACTCTAAGACAGATTCTGGATCAAGATTTAATGGGCCATCTCCTTTAACTGGATCATATGGTGATCAGAAGATGGCATATCACAACAGCGGGTCAGATATTCCCAGGCCACCTCTAAATTCTAATGCCTATGCCCGTCCTCAGCCAATATATCAGCAGCCTCCTTCAATGTACAGTAACAGAGGACCAATAGCAAAAAATGAAGCTGCCCCAAGGATAATGCCTATTTCTGCTCTGAACCCTTACCAAGGTAGGTGGACAATAAAGGCTCGAGTTACTTCAAAAGGAGAACTTAGACACTACAACAATCCTCGTGGTGACGGGAAAGTATTTTCATTTGATTTACTCGATGCTTACCGTGGAGAAATACGAGTAACATGCTTCAATACAGTAGCTGATCAGTTTTACAACCAAATTGAATCTGGTAAAGTCTACTTCATTTCTAAAGGAAGCCTGAAACCTGCTCAAAAGAACTTTAACCATCTCAAAAATGACTATGAAATATTTCTTGAAAACACATCAACAATCCAACCTTGCTTTGAGGATGACCAATCAATCCCCCAGCAGCAGTTTCATTTCCATCAGATTGGTGAGATTGAAGGCATGGACAGCAACAGTGTTGTAGATGTAATTGGTGTTGTTTCTTCCATTAATCCTGCAACTTCTTTGATGAGAAAAAATGGTACTGAGACTCAGAAGAGATCCCTTCAGTTGAAAGATATGTCTGGCCGAAGTGTTGAATTGACTCTTTGGGGGAACTTCTGTCAAGCGGAAGGGCAAAGATTGCAAAATATGTGTGACTCGGGGTTGTTCCCAGTTTTGGCCGTGAAATCTAGTAGAGTAAGCGACTTCAATGGGAAGGCAGTGGGAACCATTTCAACAAGTCAGCTCTTTATAGAGCCAGATTTCCCCGAGGCTCATTCACTGAGAGAGTGGTTTGAAAGGGAAGGGAGGAGTACTCTTTCTGTCTCTATATCCAGGGAAGTTGCTAGTGTGGGTAGGACAGATGTCAGGAAGACCATATCTCAAATTAAAGATGAGAGGTTAGGAACCTCTGAGAAGCCAGATTGGATCACGGTTAGTGCAACTGTTTCATTTATTAAGGTTGACAGTTTCTGCTACACAGCATGTCCTATCATGATCGGGGACCGACAATGTAGCAAAAAAGTTACAAATAATGGAGATGGAAAATGGAGATGTGACAGGTGTGATCAGTCTGTTGACGAATGTGACTACAGGTACATACTCCAGCTGCAAATACAGGATCATACTGGCTTAACTTGGGTAACTGCCTTTCAAGAAGGTGGTGAGGAGATCATGGGCATACCTGCAAAAAGATTGTATTATTTGAAGTATGAAGAGCAAGATGATGAGAAATTTGCAGAAATCATCCGGAAGGTTCTTTTTACAAAATTTATAATGAAGTTGAAAATAAAGGAAGAGACTTTTAGTGATGAACAGAGAGTAAGATCAACAGTGGTAAAAGCAGAAAGCATTAATTTTTCAAGCGAATCCAGGTTTCTTCTAAATTTGATGGAAAAACTCAAGCCAGAGAACAGTAGTTCTGCTACCCCAAAAGCAGAAAGCACCATACATAATTTCGGTTTTCGTGACACTGCTTCTGAAAATATTGGTGGTGGACAGTTCGTGTCACCCATTCGAAATAGTACCAATTTCAGCAGAGAATATGGTACACCCAACCAAGGTGTTCAGTATGGGAACCAGTACAGTAGCTCTAGGCCTTCTCCATCCACACCGCTTAACTCGAACACATACTGCAACAGCTGTGGGGGTTCTGGCCACAGCTCAACGAACTGCCCGAGTATCATGAGTGGTCCTGCACTGTCTGTTGGAGGTGGGATGTATTCAAATCAAGCTTCTGGCCCTTCGGGTGGTACCTCCGGTGAATGCTTCAAATGCCATCAAACTGGGCATTGGGCTAGGGATTGCCCTGGCTTGGCCAATGTCCCTCCAGCTTATGGTAACCGTGGCTTCACGGCTAGGTGA

Protein sequence

MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGNRGFTAR*
BLAST of Csa3G005560 vs. Swiss-Prot
Match: RFA1C_ARATH (Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana GN=RPA1C PE=3 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 1.3e-252
Identity = 467/860 (54.30%), Postives = 574/860 (66.74%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAET-FQPILQVIDLKLVNTS---QQSGSERFRLLVSDGTHFQQGM 69
           LTEG VM +   E ++ET   P+LQV +LKL+ +     Q  S R++ L+SDGT    GM
Sbjct: 5   LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64

Query: 70  LGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRS 129
           L T LN LV  G +Q GS++RL  Y+CN +Q R I+++++L+VI E C+IIG P     S
Sbjct: 65  LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124

Query: 130 SANALSG------------------------------NPLPSVGGLGASPGSGMIGKGNV 189
           S N   G                              +P P V    +  G   +     
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCV----- 184

Query: 190 SSASFEQPKVNQS-----------HVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFN 249
            SA+  QP+V  S           + P      N P+ GR+     P    +  +GS + 
Sbjct: 185 -SANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQ---PQVSQRYGTGSGYP 244

Query: 250 GPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP-QPIYQ-QPPSMYSNRGPIAKNEA 309
             SP T  Y      Y  S  D PR P  + AY+RP Q  YQ Q P MY NRGP+A+NEA
Sbjct: 245 ETSPSTRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEA 304

Query: 310 APRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFN 369
            PRI PI+ALNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA  GEIRVTCFN
Sbjct: 305 PPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFN 364

Query: 370 TVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQ 429
              DQF+++I  G VY IS+G+LKPAQKNFNHL NDYEI L++ STIQPC EDD +IP+ 
Sbjct: 365 DAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRY 424

Query: 430 QFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELT 489
            FHF  IG+IE M++NS  DVIG+VSSI+P  ++MRKN TE QKRSLQLKDMSGRSVE+T
Sbjct: 425 HFHFRNIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVT 484

Query: 490 LWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSL 549
           +WGNFC AEGQ+LQN+CDSG+FPVLA+K+ R+ +FNGK V TI  SQ FIEPDFPEA  L
Sbjct: 485 MWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEAREL 544

Query: 550 REWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKV 609
           R+W+EREGR+    SISRE + VGR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV
Sbjct: 545 RQWYEREGRNAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKV 604

Query: 610 DSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWV 669
           ++FCYTACPIM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW 
Sbjct: 605 ENFCYTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWA 664

Query: 670 TAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRV 729
           TAFQE GEEIMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLKIKEET+SDEQRV
Sbjct: 665 TAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRV 724

Query: 730 RSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAESTIHNFGFRDTASENIGGGQF 789
           ++TVVKAE +N+SS +RF+L  ++KLK  +++S   KAES+     +R  A  N G G  
Sbjct: 725 KATVVKAEKLNYSSNTRFMLEAIDKLKIGDANSLPIKAESS----NYRSDAF-NSGVGTS 784

Query: 790 VSPIRNSTNFSREYGTP--NQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCP 815
            +    S +  RE+G P  NQ  QYGNQYSS   S    L   T CN C  + H S NCP
Sbjct: 785 GTRDTASVDARREFGLPAANQVGQYGNQYSSDARS----LGGFTSCNVCRSNSHVSANCP 844

BLAST of Csa3G005560 vs. Swiss-Prot
Match: RFA1E_ARATH (Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana GN=RPA1E PE=2 SV=1)

HSP 1 Score: 823.5 bits (2126), Expect = 2.1e-237
Identity = 439/820 (53.54%), Postives = 553/820 (67.44%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQ-PILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGT 69
           LT GA+  I   E + E    P+LQV DLK +   Q    ERFR+++SDGT+  QGMLGT
Sbjct: 5   LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
            LN LVK G LQ GSIVRL ++V + ++ R I+IV +L+V++++ DIIG PV        
Sbjct: 65  DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPV-------- 124

Query: 130 ALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYS-NPPETGRFSA 189
                           PG    GK N    +    K N +     G    N  E GR +A
Sbjct: 125 ----------------PG----GKHNDQRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNA 184

Query: 190 SIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQP 249
           +I+P       S      PS  T +Y +       +  D  R P  S  + +PQP    P
Sbjct: 185 AISPQVGGTGSSVPASTTPS--TRAYSNPSSGNGVTRQDYARDPPTSYPH-QPQP----P 244

Query: 250 PSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFD 309
           P MY+NRGP+A+NEA P+I+P++AL+PY GRWTIKARVT+K  L+ Y+NPRG+GKVF+FD
Sbjct: 245 PPMYANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFD 304

Query: 310 LLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTS 369
           LLDA  GEIRVTCFN VADQFY+QI  G +Y IS+GSL+PAQKNFNHL+NDYEI L+N S
Sbjct: 305 LLDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNAS 364

Query: 370 TIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKR 429
           TI+ C+E+D +IP+ QFHF  IG+IE M++N +VDVIG+VSSI+P  ++ RKNGT T KR
Sbjct: 365 TIKQCYEEDAAIPRHQFHFRTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKR 424

Query: 430 SLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTIST 489
           SLQLKDMSGRSVE+T+WG+FC AEGQRLQ++CDSG+FPVLAVK+ R+S+FNGK V TI +
Sbjct: 425 SLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGS 484

Query: 490 SQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSEK 549
           SQLFI+PDF EA  L+ WFEREG+S   +S+SRE +  G+ DVRKTISQIKDE+LGTSEK
Sbjct: 485 SQLFIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEK 544

Query: 550 PDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRY 609
           PDWITVSAT+ ++K D+FCYTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRY
Sbjct: 545 PDWITVSATILYLKFDNFCYTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRY 604

Query: 610 ILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIM 669
           ILQLQIQDHT LT VTAFQE GEEIMGI AK LYY+K E +D+EKF +IIRKV FTK+  
Sbjct: 605 ILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNF 664

Query: 670 KLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAESTIHNF 729
           KLK+KEETFSDEQRV++TVVK + +N+S+++R +L  M+KL+  +++S     E + +N 
Sbjct: 665 KLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYN- 724

Query: 730 GFRDTASENIGGGQFVSPIRNSTNFSREYGT-PNQGVQYGNQYSSSRPSPSTPLNSNTYC 789
              D  +  IG      P   S+   R++G   +Q  Q GN YS           + T C
Sbjct: 725 --ADVVNTGIGSSGTRDP---SSVQRRDFGLHAHQSGQSGNHYSGG--------GATTSC 775

Query: 790 NSCGGSGHSSTNCPSIMSGPAL-SVGGGMYSNQASGPSGG 826
           N CG SGH S  CP            GG Y        GG
Sbjct: 785 NVCGNSGHVSAKCPGATKPQEQGQYMGGSYRGTTGSYGGG 775

BLAST of Csa3G005560 vs. Swiss-Prot
Match: RFA1A_ARATH (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana GN=RPA1A PE=1 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 4.9e-194
Identity = 344/679 (50.66%), Postives = 459/679 (67.60%), Query Frame = 1

Query: 29  QPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLR 88
           +P+LQV+++K++  SQ+   ER+R L+SDG   Q  M+  QLN+ VKSG+ +KGSIV+L 
Sbjct: 21  KPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLI 80

Query: 89  QYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSG 148
            Y+C+ V+ R +I+V+ ++ I +  + IG P     +   A       +  G G  P   
Sbjct: 81  DYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQK-----TFSGTGNIPPPN 140

Query: 149 MIGKGNVSSASFEQPKVNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPSP 208
            +    V +    Q  VN++    +   +    T  F  S+  PSY    S         
Sbjct: 141 RV----VFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSV-QPSYQPPAS--------- 200

Query: 209 LTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIMP 268
                      Y N G     P + + A AR  PI                         
Sbjct: 201 -----------YRNHG-----PIMKNEAPARVIPIA------------------------ 260

Query: 269 ISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQF 328
             ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFDLLD   GEIRVTCFN + D+F
Sbjct: 261 --ALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRF 320

Query: 329 YNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQ 388
           Y+  E GKVY ISKGSLKPAQKNFNHLKN++EIFLE+TST++ C ++D SIP+QQF F  
Sbjct: 321 YDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRP 380

Query: 389 IGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFC 448
           I +IE  ++N+++DVIGVV+S+NP+  ++RKNG ET +R L LKD SG++VE+TLWG FC
Sbjct: 381 ISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFC 440

Query: 449 QAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFER 508
             +G++L+ M DS   PVLA+K+ +VSDF+GK+VGTIS++QLFI PDFPEAH LR WF+ 
Sbjct: 441 NRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDY 500

Query: 509 EGRSTLSVSISREV--ASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFC 568
            G+ T S SISR+     V R ++RK +SQIK+E LG S+KPDWITV AT+SFIK DSFC
Sbjct: 501 GGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFC 560

Query: 569 YTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQ 628
           YTACP+MIGD+QC+KKVT +G  +W CDRC+Q  DECDYRY+LQ+QIQDHTGLTW+TAFQ
Sbjct: 561 YTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQ 620

Query: 629 EGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTV 688
           E GEEIMG PAK+LY +KYE + +E+FAEI+R  LF ++++KLKIKEE++ DEQRV+ TV
Sbjct: 621 ETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTV 638

Query: 689 VKAESINFSSESRFLLNLM 706
           VK + +N++SES+++L+L+
Sbjct: 681 VKVDKVNYTSESKYMLDLL 638

BLAST of Csa3G005560 vs. Swiss-Prot
Match: RFA1C_ORYSJ (Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica GN=RPA1C PE=1 SV=1)

HSP 1 Score: 679.5 bits (1752), Expect = 4.9e-194
Identity = 387/907 (42.67%), Postives = 535/907 (58.99%), Query Frame = 1

Query: 9   KLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQ----SGSERFRLLVSDGTHFQQG 68
           +LT GAV  I +      T QP+LQV+D++ V T         +ERFR+++SDG + QQ 
Sbjct: 4   QLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNTQQS 63

Query: 69  MLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLII------------IVI-------E 128
           ML T LN LVK   L+ G++V+L  ++CN +Q + II            IVI        
Sbjct: 64  MLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKHYEP 123

Query: 129 LDVIEEM-------------------CDIIGEPVS--ATRSSANALSGNPLPSVGG-LGA 188
             + +E                      ++G  V+  A ++++N+  G P  S  G LG+
Sbjct: 124 KSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSVAPRAEQAASNSSYGGPYNSAQGMLGS 183

Query: 189 SPGS---------------GMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPPETGRFSAS 248
           S G                G I   N ++A+  QP  +Q ++ +  +     +    +A+
Sbjct: 184 SIGRTVEPGPANVSAVGSYGAISAQNTTNANMMQP-TSQLNIMNANTMQPTSQLNTMNAN 243

Query: 249 IAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP-QPIYQQP 308
              P+   +      N           Q+ A   SG     P    NAY +P +P YQQP
Sbjct: 244 TMQPTSQLSSLNPNQN-----------QRFAAPASGGVFGPP---GNAYGQPSRPSYQQP 303

Query: 309 PSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFD 368
           P +Y NRGP ++N++A RI+PI+ALNPYQ +WTIKARVT+K ++RH++N R  G VFSFD
Sbjct: 304 PPVYMNRGPASRNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFD 363

Query: 369 LLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLE-NT 428
           LLDA  GEIR  C+   AD+F+ QIE G+VY IS+GSLKPAQK +N L +DYEI L+   
Sbjct: 364 LLDAQGGEIRAQCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGL 423

Query: 429 STIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQK 488
           ST++ C +DD SIP+ Q++F QI E+E M + ++VD++GVV+S++P+ ++MRK GTET+K
Sbjct: 424 STVEVCSDDDNSIPRLQYNFRQISELENMANETIVDLLGVVTSVSPSATIMRKIGTETRK 483

Query: 489 RSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTIS 548
           RS+QLKD+SGRS+E+TLWGNFC AEGQ+LQ  CDSG  P++A K +RV DFNGK+V TI 
Sbjct: 484 RSIQLKDLSGRSIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIG 543

Query: 549 TSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSE 608
           ++QL I PDFPE   LR+W+  EG++   +S+SRE+ ++GRTD RKTI+QIKDE LG  E
Sbjct: 544 STQLIINPDFPEVERLRQWYMTEGKTAPCISLSREMLNMGRTDARKTIAQIKDENLGRLE 603

Query: 609 KPDWITVSATVSFIKVDSFCYTACPIMIG-DRQCSKKVTNNGDGKWRCDRCDQSVDECDY 668
           KPDWITV A +S +  +SFCY ACP ++   RQC+KK  NNGDG W CDRCD+S    +Y
Sbjct: 604 KPDWITVKAAISHVTTESFCYPACPKLLPVGRQCNKKAINNGDGMWHCDRCDESFQNPEY 663

Query: 669 RYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKF 728
           RY+L+ QIQDHTG T+ +AF E GE+I G  A  L+ ++  +QDD +FAEII  V +  +
Sbjct: 664 RYMLRFQIQDHTGSTYASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLY 723

Query: 729 IMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEK--LKPENSSSATPKAEST 788
           + KLK+KEET++DEQ ++ T VK E ++ S ES  LL  ++   L P+  S   P     
Sbjct: 724 LFKLKVKEETYNDEQSLKCTAVKVEKLDPSKESNVLLGAIDNLLLDPKGQSDLAP----- 783

Query: 789 IHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPLNSN 846
             N GF D     +GG         +   S  Y     GV    Q +S     STPL + 
Sbjct: 784 --NAGFTDP----VGG-------HGAPTSSNAYAMNTGGVNQFGQQASISAGMSTPLAAT 843

BLAST of Csa3G005560 vs. Swiss-Prot
Match: RFA1A_ORYSJ (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica GN=RPA1A PE=1 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.5e-166
Identity = 275/468 (58.76%), Postives = 364/468 (77.78%), Query Frame = 1

Query: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
           QP Y+  P+ Y N G I KNEA  RI+PISALNPYQGRW IKARVT+KG++R Y+N +GD
Sbjct: 187 QPSYRPAPN-YKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGD 246

Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360
           GKVFSFDLLD+  GEIRVTCFN + D+FY  +E GKVY +S+G+L+PAQKN+NHL N++E
Sbjct: 247 GKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWE 306

Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
           I LEN ST+  C +++ SIP Q+F F  I EIE   +N+++D+IGVV+S+NP T++ RKN
Sbjct: 307 ILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTIQRKN 366

Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480
           G ETQKR++ LKDMSGRSVE+T+WG+FC  EG +LQ M + G+FPVLAVK+ +VSDF+GK
Sbjct: 367 GMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGK 426

Query: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVA-SVGRTDVRKTISQIKD 540
           +VGTIS++QLFI PD  EAHSLR+WF+  GR   + SISR++     R ++RKT++QIKD
Sbjct: 427 SVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNEIRKTVAQIKD 486

Query: 541 ERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
           E LG  +KPDWITV ATV F K +SF YTACP MIGDRQC+KKVT + +G W CD+CD+ 
Sbjct: 487 EGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDRE 546

Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
            +ECDYRY+LQ QIQDH+G  WVTAFQE G+E++G  A  L  LK  E++D +FA+ +  
Sbjct: 547 FEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALK--EREDPRFADTMLN 606

Query: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEK 708
            LF +++++LK+KEE++ DE++V++T VK E ++ S ES+FLL+L+ K
Sbjct: 607 CLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISK 651


HSP 2 Score: 86.3 bits (212), Expect = 1.8e-15
Identity = 53/160 (33.12%), Postives = 90/160 (56.25%), Query Frame = 1

Query: 5   MASSKLTEGAVMVICKRESSAETFQPILQVIDLK--LVNTSQQSGSERFRLLVSDGTHFQ 64
           MA ++LT   V      +++    +P+LQ+++L+   VN +  +  ERFR +VSDGT   
Sbjct: 1   MAMARLTPNGVAAALAGDTN---LKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAAS 60

Query: 65  QGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSA 124
             +   QL++  +SG L++GSIV+L +YV N V  R II+++ L+V+   C+IIG P + 
Sbjct: 61  SALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTAL 120

Query: 125 TRSSANALSGNPLPS---VGGLGASPGSGMIGKGNVSSAS 160
           +       +G+P+P+   V     +P  G++  GN S+ +
Sbjct: 121 SE------TGSPIPNPTRVEQFNGAPQYGLMA-GNSSNTT 150

BLAST of Csa3G005560 vs. TrEMBL
Match: A0A0A0L503_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005560 PE=4 SV=1)

HSP 1 Score: 1741.9 bits (4510), Expect = 0.0e+00
Identity = 861/861 (100.00%), Postives = 861/861 (100.00%), Query Frame = 1

Query: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
           MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60

Query: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
           FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV
Sbjct: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120

Query: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180
           SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP
Sbjct: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180

Query: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240
           ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP
Sbjct: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240

Query: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
           QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD
Sbjct: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300

Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360
           GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE
Sbjct: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360

Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
           IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN
Sbjct: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420

Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480
           GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK
Sbjct: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480

Query: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE 540
           AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE
Sbjct: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE 540

Query: 541 RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
           RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600

Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
           DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660

Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA 720
           LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA 720

Query: 721 ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780
           ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL
Sbjct: 721 ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780

Query: 781 NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA 840
           NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA
Sbjct: 781 NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA 840

Query: 841 RDCPGLANVPPAYGNRGFTAR 862
           RDCPGLANVPPAYGNRGFTAR
Sbjct: 841 RDCPGLANVPPAYGNRGFTAR 861

BLAST of Csa3G005560 vs. TrEMBL
Match: F6I092_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0033g01170 PE=4 SV=1)

HSP 1 Score: 1148.3 bits (2969), Expect = 0.0e+00
Identity = 577/865 (66.71%), Postives = 684/865 (79.08%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGS-ERFRLLVSDGTHFQQGMLGT 69
           LTEGA+ ++C  ++     +P+LQV D++LVNT QQS S ERFR+L+SDG H QQGML T
Sbjct: 5   LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
           Q NELVKSG+LQKGS+V+L Q+VCN +++R+III+I+LDVI E CD IGEP    +    
Sbjct: 65  QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124

Query: 130 ------ALSGNPLPSV----GGLGASPGSGMIGKGNVSSASFEQPKVNQSHVP-HMGSYS 189
                 A +  P+PS     G +  +P S   G  +++  S  +P +     P H  S+S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQS--FGNSSLTGGSAAKPNMAGVASPYHANSFS 184

Query: 190 NPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAY 249
           + P++GRF+ + APP YSK    +     +  TGSYGDQ   + N+  ++ R P N+ A 
Sbjct: 185 SNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA- 244

Query: 250 ARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNP 309
            +PQ  YQQPP MY+NRGP+A+NEAA RI+PI+ALNPYQGRWTIKARVT+KGELRHYNNP
Sbjct: 245 RQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 304

Query: 310 RGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKN 369
           RGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY ISKGSLKPAQK FNHL+N
Sbjct: 305 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 364

Query: 370 DYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLM 429
           D+EIFLE+TSTIQPCF+DD SIP+QQFHF  I ++E M++NSVVDVIGVVS I+P+ S+M
Sbjct: 365 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIM 424

Query: 430 RKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDF 489
           RKNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQRLQNMCDSG+FPVLAVKS+RV+DF
Sbjct: 425 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 484

Query: 490 NGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQI 549
           NGKAVGTISTSQLFIEPDFPEA  L+EWF++EGR+T SVSISREV S+GRTDVRKTISQI
Sbjct: 485 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQI 544

Query: 550 KDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 609
           KDERLGTSEKPDWITV ATVSFIKVD+FCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCD
Sbjct: 545 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 604

Query: 610 QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEII 669
           QSVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMGI AK LYYLKYEEQDDEKF EI+
Sbjct: 605 QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 664

Query: 670 RKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSAT 729
           R VLFTK+  KLK+KEE FSDEQRV+STVVKAE +NFSSESRFLL+++EK K E+S+   
Sbjct: 665 RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPL 724

Query: 730 PKAESTIHNFGFRDTASENIGGGQFVSPIR---NSTNFSREYGTP-NQGVQYGNQYSSSR 789
            K+E+ I N G  +    N+G  Q    +    N++N  R++G P NQGVQ+GNQY SS 
Sbjct: 725 -KSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSG 784

Query: 790 PSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPS-GGTSGECFK 849
            S +        CNSCGG+GHSS+NCPS+M  P  S GGG  S  ++GPS GGT+GEC+K
Sbjct: 785 LSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYK 844

Query: 850 CHQTGHWARDCPGLANVPPAYGNRG 858
           CHQ GHWARDCPGL   PPAYG+ G
Sbjct: 845 CHQFGHWARDCPGLNTGPPAYGSSG 865

BLAST of Csa3G005560 vs. TrEMBL
Match: A5AQN6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038295 PE=4 SV=1)

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 575/865 (66.47%), Postives = 682/865 (78.84%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGS-ERFRLLVSDGTHFQQGMLGT 69
           LTEGA+ ++C  ++     +P+LQV D++LVNT QQS S ERFR+L+SDG H QQGML T
Sbjct: 5   LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
           Q NELVKSG+LQKGS+V+L Q+VCN +++R+III+I+LDVI E CD IGEP    +    
Sbjct: 65  QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124

Query: 130 ------ALSGNPLPSV----GGLGASPGSGMIGKGNVSSASFEQPKVNQSHVP-HMGSYS 189
                 A +  P+PS     G +  +P S   G  +++  S  +P +     P H  S+S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQS--FGNSSLTGGSAAKPNMAGVASPYHANSFS 184

Query: 190 NPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAY 249
           + P++GRF+ + APP YSK    +     +  TGSYGDQ   + N+  ++ R P N+ A 
Sbjct: 185 SNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA- 244

Query: 250 ARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNP 309
            +PQ  YQQPP MY+NRGP+A+NEA  RI+PI+ALNPYQGRWTIKARVT+KGELRHYNNP
Sbjct: 245 RQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 304

Query: 310 RGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKN 369
           RGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY ISKGSLKPAQK FNHL+N
Sbjct: 305 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 364

Query: 370 DYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLM 429
           D+EIFLE+TSTIQPCF+DD SIP+QQFHF  I ++E M++NSVVDVIGVVS I+P+ S+M
Sbjct: 365 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIM 424

Query: 430 RKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDF 489
           RKNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQRLQNMCDSG+FPVLAVKS+RV+DF
Sbjct: 425 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 484

Query: 490 NGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQI 549
           NGKAVGTISTSQLFIEPDFPEA  L+EWF++EGR+T SVSISREV  +GRTDVRKTISQI
Sbjct: 485 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTISQI 544

Query: 550 KDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 609
           KDERLGTSEKPDWITV ATVSFIKVD+FCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCD
Sbjct: 545 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 604

Query: 610 QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEII 669
           QSVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMGI AK LYYLKYEEQDDEKF EI+
Sbjct: 605 QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 664

Query: 670 RKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSAT 729
           R VLFTK+  KLK+KEE FSDEQRV+STVVKAE +NFSSESRFLL+++EK K E+S+   
Sbjct: 665 RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPL 724

Query: 730 PKAESTIHNFGFRDTASENIGGGQFVSPIR---NSTNFSREYGTP-NQGVQYGNQYSSSR 789
            K+E+ I N G  +    N+G  Q    +    N++N  R++G P NQGVQ+GNQY SS 
Sbjct: 725 -KSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSG 784

Query: 790 PSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPS-GGTSGECFK 849
            S +        CNSCGG+GHSS+NCPS+M  P  S GGG  S  ++GPS GGT+GEC+K
Sbjct: 785 LSATGSTGMXQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYK 844

Query: 850 CHQTGHWARDCPGLANVPPAYGNRG 858
           CHQ GHWARDCPGL   PPAYG+ G
Sbjct: 845 CHQFGHWARDCPGLNTGPPAYGSSG 865

BLAST of Csa3G005560 vs. TrEMBL
Match: A0A067KU82_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02766 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 9.3e-311
Identity = 544/864 (62.96%), Postives = 653/864 (75.58%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQ 69
           L+EGA+  I    ++A   +P LQV +LK V T Q   S+RFRL++SDG+H QQ MLGTQ
Sbjct: 3   LSEGAIAKITSGGATAAELKPTLQVTELKQVQTKQPQQSDRFRLVLSDGSHLQQAMLGTQ 62

Query: 70  LNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSA------T 129
           +N LVK G L+ GS+V+L QY C  VQ R+III++EL V+ E C +IG PVSA      +
Sbjct: 63  INHLVKDGNLRAGSVVQLIQYTCTTVQGRMIIIILELVVVVEECALIGHPVSAQKSLGPS 122

Query: 130 RSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPPETG 189
           +SS +    NP        +S   GM+G  N++ AS + P++NQ H     SYS+  ++G
Sbjct: 123 QSSTDQPVNNPANPQSFGNSSLSGGMVGNPNLTVASAQNPRMNQLHG---NSYSSNYDSG 182

Query: 190 RFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPI 249
           R+ A  APPS+ K + G+  +G + +  +Y DQ   +HN+  +I  P   S   + P   
Sbjct: 183 RYGALNAPPSHVKAEPGAGLSGTTTINAAYNDQNAGFHNARPEISHPSGTSTCPSLPA-- 242

Query: 250 YQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKV 309
           YQQPP MYSNRGP+A+NEA PRIMPISALNPYQGRWTIKARVT KGELRHYNNPRGDGKV
Sbjct: 243 YQQPPPMYSNRGPVARNEAPPRIMPISALNPYQGRWTIKARVTVKGELRHYNNPRGDGKV 302

Query: 310 FSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFL 369
           FSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY IS+GSL+PAQKNFNHL ND EIFL
Sbjct: 303 FSFDLLDSDGGEIRVTCFNAVADQFYNQIEAGKVYLISRGSLRPAQKNFNHLHNDLEIFL 362

Query: 370 ENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTE 429
           E  S IQPCFEDD SIP+QQFHF  I E+E MD+NS+VD+IGVV+SI P  S+MRKNGTE
Sbjct: 363 EIGSVIQPCFEDDNSIPRQQFHFRSISEVESMDNNSIVDIIGVVTSITPVASIMRKNGTE 422

Query: 430 TQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVG 489
           TQKRSLQLKDMSGRSVELTLWGNFC AEG RLQN+C SG FP+LAVKS RV DFNGKAVG
Sbjct: 423 TQKRSLQLKDMSGRSVELTLWGNFCNAEGLRLQNICYSGCFPILAVKSCRVGDFNGKAVG 482

Query: 490 TISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLG 549
           TISTSQLFI+PDFPE   L+EWFE+EGR+  SV ISRE++SVGRTDV KTISQIKDE+LG
Sbjct: 483 TISTSQLFIDPDFPEGQRLKEWFEKEGRNIPSVCISREMSSVGRTDVPKTISQIKDEKLG 542

Query: 550 TSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDEC 609
           TSEKPDWITV ATV FIK DSFCYTACPIM GDR CSKKVTNNGDGKWRC++CDQS+DEC
Sbjct: 543 TSEKPDWITVGATVIFIKSDSFCYTACPIMAGDRPCSKKVTNNGDGKWRCEKCDQSMDEC 602

Query: 610 DYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFT 669
           DYRYILQ QIQDHTG+TWVTAFQE G+EIMGI AK L++LKYE+QDDE F++IIR+VLF+
Sbjct: 603 DYRYILQFQIQDHTGITWVTAFQESGQEIMGISAKDLHFLKYEKQDDEGFSKIIRQVLFS 662

Query: 670 KFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAEST 729
           KF  KLK+KEETFSDEQRV+STVVKAE +N SS S+FLL+++EK K  N + A+   ES 
Sbjct: 663 KFQFKLKVKEETFSDEQRVKSTVVKAEKVNHSSHSKFLLDMIEKFKSGNYTLAS-NPESG 722

Query: 730 IHNFGFRDTASENIGGGQ----FVSPIRNSTNFSREYGT-PNQGVQYGNQYSSSRPSPST 789
             N G   T  EN+GG Q      + +  ++  +RE G+  NQ  QYGNQYS+  P+   
Sbjct: 723 YPNTGANSTGIENVGGRQGGPVGSNQVGTNSYAARESGSLSNQVGQYGNQYSTRFPT--- 782

Query: 790 PLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQAS--GPSGGTSGECFKCHQT 849
               +  CNSCG + H+S NCPSIM+ P  SVG G+Y N+ S     GG +GEC+KCHQ 
Sbjct: 783 ---HDLSCNSCGATSHNSANCPSIMNAPRQSVGAGVYPNRGSSLAGGGGAAGECYKCHQI 842

Query: 850 GHWARDCPGLANVPPAYGNRGFTA 861
           GHWARDCPGL++V PAYG+   ++
Sbjct: 843 GHWARDCPGLSSVTPAYGSSAISS 854

BLAST of Csa3G005560 vs. TrEMBL
Match: A0A059CJ91_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02593 PE=4 SV=1)

HSP 1 Score: 1054.3 bits (2725), Expect = 8.1e-305
Identity = 534/887 (60.20%), Postives = 663/887 (74.75%), Query Frame = 1

Query: 3   ASMASSKLTEGAVMVICKRESSAET-FQPILQVIDLKLVNT----SQQSGS--------E 62
           ++ A  KLTEGA+  IC+RE   E+  +PI+QV+D+K+V T    +Q  G         +
Sbjct: 2   SAAAGVKLTEGAIWKICERELVGESEVKPIVQVVDMKMVKTPGNQNQNPGGAGAVERERQ 61

Query: 63  RFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVI 122
           RFR+++SDGTH QQGML TQ N LV SG+LQKGSI+R+  +VC+PV++RLII++++LDV+
Sbjct: 62  RFRMVLSDGTHMQQGMLATQHNHLVDSGRLQKGSIIRMNHFVCSPVKDRLIIVIVDLDVV 121

Query: 123 EEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSH 182
            +  D+IGEPV A                      PGS        +  S   P +  +H
Sbjct: 122 LDKQDLIGEPVMAK--------------------VPGS------EAAKPSLPTPSLQNTH 181

Query: 183 VPHMGSYSNPPETGRFSASIAPPSY----------SKTDSGSRFNGPSPLTGSYGDQKMA 242
               GSYS+  + GR+ A+ A PSY          S T+ G   +  +   GSY +Q M 
Sbjct: 182 G---GSYSSNIDQGRYPATSAAPSYGNAAPIAPVYSNTEPGVPRS--AQFGGSYTNQNMG 241

Query: 243 YHNSGSDIPRPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRW 302
           +HN+ ++  R  +N+ A+ +P+P YQQPP MY NRGPIAKNEA PRI+PI+ALNPYQ RW
Sbjct: 242 FHNNTNEFQRSSVNTYAH-QPRPSYQQPPPMYMNRGPIAKNEAPPRIIPIAALNPYQNRW 301

Query: 303 TIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYF 362
           T+KARVT+KGELRHYNNPRGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY 
Sbjct: 302 TVKARVTAKGELRHYNNPRGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYL 361

Query: 363 ISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNS 422
           IS+G+LKPAQKNFNHL+ND+EI+LE TS +QPC EDD  IP+QQFHFH I ++EGM+SNS
Sbjct: 362 ISRGTLKPAQKNFNHLRNDHEIYLETTSIVQPCIEDDNQIPRQQFHFHPISDVEGMESNS 421

Query: 423 VVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMC 482
           +VDVIGVV SINP TS+M+KNG+ETQKR+L LKD SGRSVELTLWG+FC AEGQRLQ +C
Sbjct: 422 IVDVIGVVHSINPVTSIMKKNGSETQKRTLHLKDESGRSVELTLWGSFCNAEGQRLQILC 481

Query: 483 DSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSIS 542
           DSG +PVLAVKS R+S+FNGKAVGTISTSQLFIEPD  EA  L+EWFEREG++  +VSIS
Sbjct: 482 DSGQYPVLAVKSGRISEFNGKAVGTISTSQLFIEPDIEEARRLKEWFEREGKTAPTVSIS 541

Query: 543 REVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQC 602
           RE+ S+GRTD RKT+ QIKDE+LGTSEKPDWIT+SA +++IK+D+FCYTACPI+IGDRQC
Sbjct: 542 REMTSMGRTDARKTVCQIKDEKLGTSEKPDWITISANIAYIKLDNFCYTACPIVIGDRQC 601

Query: 603 SKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKR 662
           +KKVTNNGDGKWRCDRCD+ VDECDYRYILQ+QIQDHTG  WVTAFQE GEEIMG+ AK 
Sbjct: 602 NKKVTNNGDGKWRCDRCDRCVDECDYRYILQIQIQDHTGQAWVTAFQECGEEIMGVSAKE 661

Query: 663 LYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESR 722
           L+YL+  E +DE+F EIIRKV FTKFI KLK+KEE FSDEQRV+STVVKA+ +NFSSE+R
Sbjct: 662 LFYLR-TENEDERFGEIIRKVFFTKFIFKLKVKEEIFSDEQRVKSTVVKADKVNFSSEAR 721

Query: 723 FLLNLMEKLKPENSSSATPKAESTIHNFGFRDTASENIGGGQFVSPIRN-------STNF 782
           FLL+L+EK + + S S+  ++E+T+ N G + T + N    Q  S + N        T  
Sbjct: 722 FLLDLLEKNRADGSGSSDVRSENTVSNSGMKSTLTGNAESMQSSSFVGNHSMGNNAGTGG 781

Query: 783 SREYGTPNQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGG 842
            R   +    VQ GNQY+ +R S + PL+ N+ C SCG SGHSS NCPSIMSGP+ ++GG
Sbjct: 782 YRSPVSYTSAVQNGNQYNGARLSMTGPLDMNSSCTSCGRSGHSSGNCPSIMSGPSQTMGG 841

Query: 843 GMYSNQASGPSGGTSGECFKCHQTGHWARDCPGLANVPPAYGNRGFT 860
           G Y N+A G SG T   C+KC+QTGHWARDCPGL+ VPPAYG+   T
Sbjct: 842 GAYMNRAPGGSGDT---CYKCNQTGHWARDCPGLSGVPPAYGSSAAT 852

BLAST of Csa3G005560 vs. TAIR10
Match: AT5G45400.1 (AT5G45400.1 Replication factor-A protein 1-related)

HSP 1 Score: 874.0 bits (2257), Expect = 7.6e-254
Identity = 467/860 (54.30%), Postives = 574/860 (66.74%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAET-FQPILQVIDLKLVNTS---QQSGSERFRLLVSDGTHFQQGM 69
           LTEG VM +   E ++ET   P+LQV +LKL+ +     Q  S R++ L+SDGT    GM
Sbjct: 5   LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64

Query: 70  LGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRS 129
           L T LN LV  G +Q GS++RL  Y+CN +Q R I+++++L+VI E C+IIG P     S
Sbjct: 65  LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124

Query: 130 SANALSG------------------------------NPLPSVGGLGASPGSGMIGKGNV 189
           S N   G                              +P P V    +  G   +     
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSANSPQPQVVHNSSDAGRYCV----- 184

Query: 190 SSASFEQPKVNQS-----------HVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFN 249
            SA+  QP+V  S           + P      N P+ GR+     P    +  +GS + 
Sbjct: 185 -SANSPQPQVVHSSSDAGRYGVSANSPQRQVVHNSPDAGRYGQ---PQVSQRYGTGSGYP 244

Query: 250 GPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP-QPIYQ-QPPSMYSNRGPIAKNEA 309
             SP T  Y      Y  S  D PR P  + AY+RP Q  YQ Q P MY NRGP+A+NEA
Sbjct: 245 ETSPSTRPYVSSNAGYGGSRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNRGPVARNEA 304

Query: 310 APRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFN 369
            PRI PI+ALNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA  GEIRVTCFN
Sbjct: 305 PPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFN 364

Query: 370 TVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQ 429
              DQF+++I  G VY IS+G+LKPAQKNFNHL NDYEI L++ STIQPC EDD +IP+ 
Sbjct: 365 DAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRY 424

Query: 430 QFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELT 489
            FHF  IG+IE M++NS  DVIG+VSSI+P  ++MRKN TE QKRSLQLKDMSGRSVE+T
Sbjct: 425 HFHFRNIGDIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVT 484

Query: 490 LWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSL 549
           +WGNFC AEGQ+LQN+CDSG+FPVLA+K+ R+ +FNGK V TI  SQ FIEPDFPEA  L
Sbjct: 485 MWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEAREL 544

Query: 550 REWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKV 609
           R+W+EREGR+    SISRE + VGR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV
Sbjct: 545 RQWYEREGRNAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKV 604

Query: 610 DSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWV 669
           ++FCYTACPIM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW 
Sbjct: 605 ENFCYTACPIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWA 664

Query: 670 TAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRV 729
           TAFQE GEEIMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLKIKEET+SDEQRV
Sbjct: 665 TAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRV 724

Query: 730 RSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAESTIHNFGFRDTASENIGGGQF 789
           ++TVVKAE +N+SS +RF+L  ++KLK  +++S   KAES+     +R  A  N G G  
Sbjct: 725 KATVVKAEKLNYSSNTRFMLEAIDKLKIGDANSLPIKAESS----NYRSDAF-NSGVGTS 784

Query: 790 VSPIRNSTNFSREYGTP--NQGVQYGNQYSSSRPSPSTPLNSNTYCNSCGGSGHSSTNCP 815
            +    S +  RE+G P  NQ  QYGNQYSS   S    L   T CN C  + H S NCP
Sbjct: 785 GTRDTASVDARREFGLPAANQVGQYGNQYSSDARS----LGGFTSCNVCRSNSHVSANCP 844

BLAST of Csa3G005560 vs. TAIR10
Match: AT4G19130.1 (AT4G19130.1 Replication factor-A protein 1-related)

HSP 1 Score: 823.5 bits (2126), Expect = 1.2e-238
Identity = 439/820 (53.54%), Postives = 553/820 (67.44%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQ-PILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGT 69
           LT GA+  I   E + E    P+LQV DLK +   Q    ERFR+++SDGT+  QGMLGT
Sbjct: 5   LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
            LN LVK G LQ GSIVRL ++V + ++ R I+IV +L+V++++ DIIG PV        
Sbjct: 65  DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPV-------- 124

Query: 130 ALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYS-NPPETGRFSA 189
                           PG    GK N    +    K N +     G    N  E GR +A
Sbjct: 125 ----------------PG----GKHNDQRGADSGIKFNTTEQQGSGIRQVNNIEPGRSNA 184

Query: 190 SIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQP 249
           +I+P       S      PS  T +Y +       +  D  R P  S  + +PQP    P
Sbjct: 185 AISPQVGGTGSSVPASTTPS--TRAYSNPSSGNGVTRQDYARDPPTSYPH-QPQP----P 244

Query: 250 PSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFD 309
           P MY+NRGP+A+NEA P+I+P++AL+PY GRWTIKARVT+K  L+ Y+NPRG+GKVF+FD
Sbjct: 245 PPMYANRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFD 304

Query: 310 LLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTS 369
           LLDA  GEIRVTCFN VADQFY+QI  G +Y IS+GSL+PAQKNFNHL+NDYEI L+N S
Sbjct: 305 LLDADGGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNAS 364

Query: 370 TIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKR 429
           TI+ C+E+D +IP+ QFHF  IG+IE M++N +VDVIG+VSSI+P  ++ RKNGT T KR
Sbjct: 365 TIKQCYEEDAAIPRHQFHFRTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKR 424

Query: 430 SLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTIST 489
           SLQLKDMSGRSVE+T+WG+FC AEGQRLQ++CDSG+FPVLAVK+ R+S+FNGK V TI +
Sbjct: 425 SLQLKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGS 484

Query: 490 SQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDERLGTSEK 549
           SQLFI+PDF EA  L+ WFEREG+S   +S+SRE +  G+ DVRKTISQIKDE+LGTSEK
Sbjct: 485 SQLFIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEK 544

Query: 550 PDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRY 609
           PDWITVSAT+ ++K D+FCYTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRY
Sbjct: 545 PDWITVSATILYLKFDNFCYTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRY 604

Query: 610 ILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIM 669
           ILQLQIQDHT LT VTAFQE GEEIMGI AK LYY+K E +D+EKF +IIRKV FTK+  
Sbjct: 605 ILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNF 664

Query: 670 KLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKAESTIHNF 729
           KLK+KEETFSDEQRV++TVVK + +N+S+++R +L  M+KL+  +++S     E + +N 
Sbjct: 665 KLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYN- 724

Query: 730 GFRDTASENIGGGQFVSPIRNSTNFSREYGT-PNQGVQYGNQYSSSRPSPSTPLNSNTYC 789
              D  +  IG      P   S+   R++G   +Q  Q GN YS           + T C
Sbjct: 725 --ADVVNTGIGSSGTRDP---SSVQRRDFGLHAHQSGQSGNHYSGG--------GATTSC 775

Query: 790 NSCGGSGHSSTNCPSIMSGPAL-SVGGGMYSNQASGPSGG 826
           N CG SGH S  CP            GG Y        GG
Sbjct: 785 NVCGNSGHVSAKCPGATKPQEQGQYMGGSYRGTTGSYGGG 775

BLAST of Csa3G005560 vs. TAIR10
Match: AT2G06510.1 (AT2G06510.1 replication protein A 1A)

HSP 1 Score: 679.5 bits (1752), Expect = 2.7e-195
Identity = 344/679 (50.66%), Postives = 459/679 (67.60%), Query Frame = 1

Query: 29  QPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQGMLGTQLNELVKSGKLQKGSIVRLR 88
           +P+LQV+++K++  SQ+   ER+R L+SDG   Q  M+  QLN+ VKSG+ +KGSIV+L 
Sbjct: 21  KPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLI 80

Query: 89  QYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSANALSGNPLPSVGGLGASPGSG 148
            Y+C+ V+ R +I+V+ ++ I +  + IG P     +   A       +  G G  P   
Sbjct: 81  DYICSDVKGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQK-----TFSGTGNIPPPN 140

Query: 149 MIGKGNVSSASFEQPKVNQSHVPHMGSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPSP 208
            +    V +    Q  VN++    +   +    T  F  S+  PSY    S         
Sbjct: 141 RV----VFNEPMVQHSVNRAPPRGVNIQNQANNTPSFRPSV-QPSYQPPAS--------- 200

Query: 209 LTGSYGDQKMAYHNSGSDIPRPPLNSNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIMP 268
                      Y N G     P + + A AR  PI                         
Sbjct: 201 -----------YRNHG-----PIMKNEAPARVIPIA------------------------ 260

Query: 269 ISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQF 328
             ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFDLLD   GEIRVTCFN + D+F
Sbjct: 261 --ALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRF 320

Query: 329 YNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQ 388
           Y+  E GKVY ISKGSLKPAQKNFNHLKN++EIFLE+TST++ C ++D SIP+QQF F  
Sbjct: 321 YDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRP 380

Query: 389 IGEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFC 448
           I +IE  ++N+++DVIGVV+S+NP+  ++RKNG ET +R L LKD SG++VE+TLWG FC
Sbjct: 381 ISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWGEFC 440

Query: 449 QAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFER 508
             +G++L+ M DS   PVLA+K+ +VSDF+GK+VGTIS++QLFI PDFPEAH LR WF+ 
Sbjct: 441 NRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDY 500

Query: 509 EGRSTLSVSISREV--ASVGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFIKVDSFC 568
            G+ T S SISR+     V R ++RK +SQIK+E LG S+KPDWITV AT+SFIK DSFC
Sbjct: 501 GGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFC 560

Query: 569 YTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQ 628
           YTACP+MIGD+QC+KKVT +G  +W CDRC+Q  DECDYRY+LQ+QIQDHTGLTW+TAFQ
Sbjct: 561 YTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWITAFQ 620

Query: 629 EGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTV 688
           E GEEIMG PAK+LY +KYE + +E+FAEI+R  LF ++++KLKIKEE++ DEQRV+ TV
Sbjct: 621 ETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVKMTV 638

Query: 689 VKAESINFSSESRFLLNLM 706
           VK + +N++SES+++L+L+
Sbjct: 681 VKVDKVNYTSESKYMLDLL 638

BLAST of Csa3G005560 vs. TAIR10
Match: AT5G08020.1 (AT5G08020.1 RPA70-kDa subunit B)

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-82
Identity = 169/466 (36.27%), Postives = 264/466 (56.65%), Query Frame = 1

Query: 253 NRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAY 312
           N  P A+     R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D  
Sbjct: 144 NAAPAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEE 203

Query: 313 RGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPC 372
             +I+ T FN  A +FY++ E GKVY+IS+GSLK A K F  ++NDYE+ L   S ++  
Sbjct: 204 GTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEA 263

Query: 373 FEDDQSIPQQQFHFHQIGEI-EGMDSNSVVDVIGVVSSINPATSLMRKNGTE-TQKRSLQ 432
             ++   P+ +F+F  I E+   ++   ++DVIGVV S++P  S+ RKN  E   KR + 
Sbjct: 264 SNEEMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDIT 323

Query: 433 LKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQL 492
           L D + ++V ++LW +     GQ L +M D+   PV+A+KS +V  F G ++ TIS S +
Sbjct: 324 LADETKKTVVVSLWNDLATGIGQELLDMADN--HPVIAIKSLKVGAFQGVSLSTISRSNV 383

Query: 493 FIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKT------ISQIKDERLGT 552
            I P+ PEA  L+ W++ EG+ T   +I   ++S      R        +S I       
Sbjct: 384 VINPNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLG 443

Query: 553 SEKPDWITVSATVSFIKVD-SFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDEC 612
            EKP + +  A +SFIK D +  Y AC      + C+KKVT   D  + C+ C +   EC
Sbjct: 444 EEKPVFFSTRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCESCQKKDQEC 503

Query: 613 DYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFT 672
             RYI+ +++ D TG TW++AF +  E+I+G  A  L  LK EE +  +F   +++  ++
Sbjct: 504 SLRYIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWS 563

Query: 673 KFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLK 710
             + ++ + ++ ++ E+R R TV     I+F++E+R LL  + K K
Sbjct: 564 SHLFRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISKNK 601

BLAST of Csa3G005560 vs. TAIR10
Match: AT5G61000.1 (AT5G61000.1 Replication factor-A protein 1-related)

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-80
Identity = 161/459 (35.08%), Postives = 261/459 (56.86%), Query Frame = 1

Query: 253 NRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAY 312
           N  P A+     R+ P+ +LNPYQG WTIK RVT+KG +R+Y N RG+G VF+ +L D  
Sbjct: 168 NAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEE 227

Query: 313 RGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYEIFLENTSTIQPC 372
             +I+ T FN  A +F+++ + GKVY+IS+GSLK A K F  ++NDYE+ L   S ++  
Sbjct: 228 GTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEA 287

Query: 373 FEDDQSIPQQQFHFHQIGEIE-GMDSNSVVDVIGVVSSINPATSLMRKNGTE-TQKRSLQ 432
             ++  IP+ +F+F  I E+   ++   ++D+IGVV S++P  S+ R+   E   KR + 
Sbjct: 288 SSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDIT 347

Query: 433 LKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGKAVGTISTSQL 492
           L D S ++V ++LW +     GQ L +M D    PV+A+KS +V DF G ++ TIS S +
Sbjct: 348 LADESRKTVVVSLWNDLATGIGQELLDMADQS--PVIAIKSLKVGDFQGVSLSTISRSNV 407

Query: 493 FIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRK------TISQIKDERLGT 552
            I P+ PEA  L+ WF+ EG+     SI   ++   +   R        +S I       
Sbjct: 408 VINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLF 467

Query: 553 SEKPDWITVSATVSFIKVD-SFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDEC 612
            EKP + +  A +SFIK D +  Y AC      + C+KKVT   D  + C+ C +  +EC
Sbjct: 468 EEKPVFFSTRAYISFIKPDQTMWYQAC------KTCNKKVTEALDSGYWCEGCQRKYEEC 527

Query: 613 DYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFT 672
             RYI+ +++ D +G TW+++F +  E+I+G  A  L  LK EE +  ++   +++  ++
Sbjct: 528 SLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWS 587

Query: 673 KFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLL 703
             + ++ + +  ++ E+R R TV     ++F++E+R LL
Sbjct: 588 SHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLL 618

BLAST of Csa3G005560 vs. NCBI nr
Match: gi|449456771|ref|XP_004146122.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus])

HSP 1 Score: 1741.9 bits (4510), Expect = 0.0e+00
Identity = 861/861 (100.00%), Postives = 861/861 (100.00%), Query Frame = 1

Query: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
           MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60

Query: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
           FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV
Sbjct: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120

Query: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180
           SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP
Sbjct: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180

Query: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240
           ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP
Sbjct: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240

Query: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
           QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD
Sbjct: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300

Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360
           GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE
Sbjct: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360

Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
           IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN
Sbjct: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420

Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480
           GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK
Sbjct: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480

Query: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE 540
           AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE
Sbjct: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE 540

Query: 541 RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
           RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600

Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
           DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660

Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA 720
           LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA 720

Query: 721 ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780
           ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL
Sbjct: 721 ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780

Query: 781 NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA 840
           NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA
Sbjct: 781 NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA 840

Query: 841 RDCPGLANVPPAYGNRGFTAR 862
           RDCPGLANVPPAYGNRGFTAR
Sbjct: 841 RDCPGLANVPPAYGNRGFTAR 861

BLAST of Csa3G005560 vs. NCBI nr
Match: gi|659095462|ref|XP_008448593.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo])

HSP 1 Score: 1702.6 bits (4408), Expect = 0.0e+00
Identity = 840/861 (97.56%), Postives = 849/861 (98.61%), Query Frame = 1

Query: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
           MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH
Sbjct: 1   MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60

Query: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
           FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEE+CDIIGEPV
Sbjct: 61  FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120

Query: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180
           SATRSSA+A SGNPL SVGGLGASPGSGMIGKGNVS ASFEQPK NQSHVPHMGSYSNPP
Sbjct: 121 SATRSSASAFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNPP 180

Query: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240
           ETGRFSASIAPP YSKT+ GSRFNG SPLTGSYGDQKMAYHNSGSD+PRPPLNSNAYARP
Sbjct: 181 ETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYARP 240

Query: 241 QPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRGD 300
           QP+YQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVT KGELRHYNNPRGD
Sbjct: 241 QPMYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRGD 300

Query: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDYE 360
           GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKN+NHLKNDYE
Sbjct: 301 GKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDYE 360

Query: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420
           IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN
Sbjct: 361 IFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRKN 420

Query: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480
           GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK
Sbjct: 421 GTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNGK 480

Query: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKDE 540
           AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVA+VGRTDVRKTISQIKDE
Sbjct: 481 AVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKDE 540

Query: 541 RLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600
           RLGTSEKPDWITVSATVSFIKVD+FCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV
Sbjct: 541 RLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSV 600

Query: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660
           DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV
Sbjct: 601 DECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKV 660

Query: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPKA 720
           LFTKFIMKLKIKEETFSDEQRVRSTVVKAESI+FSSESRFLLNLMEKLKPENSSS TPKA
Sbjct: 661 LFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPKA 720

Query: 721 ESTIHNFGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780
           ESTIHN GFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL
Sbjct: 721 ESTIHNLGFRDTASENIGGGQFVSPIRNSTNFSREYGTPNQGVQYGNQYSSSRPSPSTPL 780

Query: 781 NSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGHWA 840
           NSNTYCNSCGGSGHSS NCPSIMSGPALSVGGGMYSNQASGPS GTSGECFKCHQTGHWA
Sbjct: 781 NSNTYCNSCGGSGHSSMNCPSIMSGPALSVGGGMYSNQASGPSAGTSGECFKCHQTGHWA 840

Query: 841 RDCPGLANVPPAYGNRGFTAR 862
           RDCPGLANVPPAYGNRGFTAR
Sbjct: 841 RDCPGLANVPPAYGNRGFTAR 861

BLAST of Csa3G005560 vs. NCBI nr
Match: gi|1009158592|ref|XP_015897369.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit A isoform X1 [Ziziphus jujuba])

HSP 1 Score: 1175.2 bits (3039), Expect = 0.0e+00
Identity = 584/865 (67.51%), Postives = 696/865 (80.46%), Query Frame = 1

Query: 5   MASSKLTEGAVMVICKRE-SSAETFQPILQVIDLKLVNTSQQSGS------ERFRLLVSD 64
           M ++ LTEGA+M IC+ E    E ++P+LQ++D+++VNT  Q G       ER+R+++SD
Sbjct: 1   METTTLTEGAIMKICRDEYPKGENWKPVLQILDVRMVNT--QGGQPVAPEKERYRVVISD 60

Query: 65  GTHFQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIG 124
           G + QQGMLGTQ N+LV+ G+LQKGS+VRL+++VC PVQ RLIII+++LD+I E CD+IG
Sbjct: 61  GAYHQQGMLGTQNNDLVRQGRLQKGSLVRLKEFVCTPVQARLIIIIVDLDLILETCDLIG 120

Query: 125 EPVSATR----SSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHM 184
           EP  A +      + A++GNP  SVG     P  G + +  V + S EQP++NQS     
Sbjct: 121 EPEPAPKFVNTPPSGAVTGNPQSSVGN---KPSGGQVNE-TVPATSVEQPRMNQSFG--- 180

Query: 185 GSYSNPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLN 244
            +YS  P +GR++A   P  Y K + G+ F  P+P+ GSY +Q M ++N  S++ RPP N
Sbjct: 181 SAYSTNPNSGRYAAPGTPSIYPKIEPGAGFPRPAPVGGSYSNQNMGFNNPRSEVSRPPQN 240

Query: 245 SNAYARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRH 304
           S+  A P P YQQPP MYSNRGPIAKNEA  RI+PI+ALNPYQGRWTIKARVTSKGELRH
Sbjct: 241 SHVRA-PYPSYQQPPPMYSNRGPIAKNEAPARILPIAALNPYQGRWTIKARVTSKGELRH 300

Query: 305 YNNPRGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFN 364
           +NNPRGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE GK+Y IS+GSLKPAQK FN
Sbjct: 301 FNNPRGDGKVFSFDLLDSEGGEIRVTCFNAVADQFYNQIEVGKIYMISRGSLKPAQKAFN 360

Query: 365 HLKNDYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPA 424
           HL ND+EIFLE+TS +QPC+EDD SIP+QQFHFH I +++ MD+NSVVD+IGVVS INPA
Sbjct: 361 HLHNDHEIFLESTSIVQPCYEDDNSIPRQQFHFHPISDVQEMDNNSVVDLIGVVSFINPA 420

Query: 425 TSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSR 484
           +S+MRKNGTETQKRSL LKDMSGRSVELTLWGNFC AEGQRLQNMCDSG+FPVLAVKS R
Sbjct: 421 SSIMRKNGTETQKRSLHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSGR 480

Query: 485 VSDFNGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKT 544
           V+DFNGKAVGTIS+SQLFI PDFPEAH L+EWF++EGR+  SVSISRE+++VGRTD+RKT
Sbjct: 481 VNDFNGKAVGTISSSQLFINPDFPEAHRLKEWFDKEGRNAPSVSISREISTVGRTDMRKT 540

Query: 545 ISQIKDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRC 604
           ISQIKDE+LGTSEKPDWITV AT+SFIKVD+FCYTACP+MIGDRQC+KKVTNNGDGKWRC
Sbjct: 541 ISQIKDEKLGTSEKPDWITVGATISFIKVDNFCYTACPLMIGDRQCNKKVTNNGDGKWRC 600

Query: 605 DRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKF 664
           DRCDQS++ECDYRYILQLQIQDHTGLTWVTAFQEGGEE+MG+ AK LYYLK+EEQDDEKF
Sbjct: 601 DRCDQSIEECDYRYILQLQIQDHTGLTWVTAFQEGGEEVMGVSAKSLYYLKHEEQDDEKF 660

Query: 665 AEIIRKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENS 724
           A+I+RKVLF KFI KLKIKEETFSDEQRV+STVVKAE +NFSSES+FLLNLM+KLK  NS
Sbjct: 661 AQIVRKVLFNKFIFKLKIKEETFSDEQRVKSTVVKAERVNFSSESKFLLNLMDKLKAGNS 720

Query: 725 SSATPKAESTIHNFGFRDTASENIGGGQ-FVSPIRNSTNFSREYGTP-NQGVQYGNQYSS 784
           SS+ PK E+ I N G    A  N G  Q   +   NS N  RE+GTP NQ  QYGN+YSS
Sbjct: 721 SSSIPKVENIIPNPGLNTNAPGNFGTRQPTPADFGNSVNAVREFGTPANQVGQYGNRYSS 780

Query: 785 SRPSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPS-GGTSGEC 844
           S             CNSCGG+GHSS NCPSI + P LS GGG  +  +SGPS G +S EC
Sbjct: 781 SGCPSIGSSGMYLSCNSCGGTGHSSMNCPSIANSPGLSSGGGYGNRASSGPSFGNSSDEC 840

Query: 845 FKCHQTGHWARDCPGLANVPPAYGN 856
           +KCHQTGHWARDCPG +N+PP+YG+
Sbjct: 841 YKCHQTGHWARDCPGSSNIPPSYGS 855

BLAST of Csa3G005560 vs. NCBI nr
Match: gi|225427514|ref|XP_002264009.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Vitis vinifera])

HSP 1 Score: 1148.3 bits (2969), Expect = 0.0e+00
Identity = 577/865 (66.71%), Postives = 684/865 (79.08%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGS-ERFRLLVSDGTHFQQGMLGT 69
           LTEGA+ ++C  ++     +P+LQV D++LVNT QQS S ERFR+L+SDG H QQGML T
Sbjct: 5   LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
           Q NELVKSG+LQKGS+V+L Q+VCN +++R+III+I+LDVI E CD IGEP    +    
Sbjct: 65  QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124

Query: 130 ------ALSGNPLPSV----GGLGASPGSGMIGKGNVSSASFEQPKVNQSHVP-HMGSYS 189
                 A +  P+PS     G +  +P S   G  +++  S  +P +     P H  S+S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQS--FGNSSLTGGSAAKPNMAGVASPYHANSFS 184

Query: 190 NPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAY 249
           + P++GRF+ + APP YSK    +     +  TGSYGDQ   + N+  ++ R P N+ A 
Sbjct: 185 SNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA- 244

Query: 250 ARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNP 309
            +PQ  YQQPP MY+NRGP+A+NEAA RI+PI+ALNPYQGRWTIKARVT+KGELRHYNNP
Sbjct: 245 RQPQSAYQQPPPMYTNRGPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 304

Query: 310 RGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKN 369
           RGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY ISKGSLKPAQK FNHL+N
Sbjct: 305 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 364

Query: 370 DYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLM 429
           D+EIFLE+TSTIQPCF+DD SIP+QQFHF  I ++E M++NSVVDVIGVVS I+P+ S+M
Sbjct: 365 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIM 424

Query: 430 RKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDF 489
           RKNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQRLQNMCDSG+FPVLAVKS+RV+DF
Sbjct: 425 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 484

Query: 490 NGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQI 549
           NGKAVGTISTSQLFIEPDFPEA  L+EWF++EGR+T SVSISREV S+GRTDVRKTISQI
Sbjct: 485 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQI 544

Query: 550 KDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 609
           KDERLGTSEKPDWITV ATVSFIKVD+FCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCD
Sbjct: 545 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 604

Query: 610 QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEII 669
           QSVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMGI AK LYYLKYEEQDDEKF EI+
Sbjct: 605 QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 664

Query: 670 RKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSAT 729
           R VLFTK+  KLK+KEE FSDEQRV+STVVKAE +NFSSESRFLL+++EK K E+S+   
Sbjct: 665 RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPL 724

Query: 730 PKAESTIHNFGFRDTASENIGGGQFVSPIR---NSTNFSREYGTP-NQGVQYGNQYSSSR 789
            K+E+ I N G  +    N+G  Q    +    N++N  R++G P NQGVQ+GNQY SS 
Sbjct: 725 -KSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSG 784

Query: 790 PSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPS-GGTSGECFK 849
            S +        CNSCGG+GHSS+NCPS+M  P  S GGG  S  ++GPS GGT+GEC+K
Sbjct: 785 LSATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYK 844

Query: 850 CHQTGHWARDCPGLANVPPAYGNRG 858
           CHQ GHWARDCPGL   PPAYG+ G
Sbjct: 845 CHQFGHWARDCPGLNTGPPAYGSSG 865

BLAST of Csa3G005560 vs. NCBI nr
Match: gi|147856620|emb|CAN82475.1| (hypothetical protein VITISV_038295 [Vitis vinifera])

HSP 1 Score: 1144.4 bits (2959), Expect = 0.0e+00
Identity = 575/865 (66.47%), Postives = 682/865 (78.84%), Query Frame = 1

Query: 10  LTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGS-ERFRLLVSDGTHFQQGMLGT 69
           LTEGA+ ++C  ++     +P+LQV D++LVNT QQS S ERFR+L+SDG H QQGML T
Sbjct: 5   LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64

Query: 70  QLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPVSATRSSAN 129
           Q NELVKSG+LQKGS+V+L Q+VCN +++R+III+I+LDVI E CD IGEP    +    
Sbjct: 65  QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124

Query: 130 ------ALSGNPLPSV----GGLGASPGSGMIGKGNVSSASFEQPKVNQSHVP-HMGSYS 189
                 A +  P+PS     G +  +P S   G  +++  S  +P +     P H  S+S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQS--FGNSSLTGGSAAKPNMAGVASPYHANSFS 184

Query: 190 NPPETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAY 249
           + P++GRF+ + APP YSK    +     +  TGSYGDQ   + N+  ++ R P N+ A 
Sbjct: 185 SNPDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA- 244

Query: 250 ARPQPIYQQPPSMYSNRGPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNP 309
            +PQ  YQQPP MY+NRGP+A+NEA  RI+PI+ALNPYQGRWTIKARVT+KGELRHYNNP
Sbjct: 245 RQPQSAYQQPPPMYTNRGPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNNP 304

Query: 310 RGDGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKN 369
           RGDGKVFSFDLLD+  GEIRVTCFN VADQFYNQIE+GKVY ISKGSLKPAQK FNHL+N
Sbjct: 305 RGDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRN 364

Query: 370 DYEIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLM 429
           D+EIFLE+TSTIQPCF+DD SIP+QQFHF  I ++E M++NSVVDVIGVVS I+P+ S+M
Sbjct: 365 DHEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIM 424

Query: 430 RKNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDF 489
           RKNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQRLQNMCDSG+FPVLAVKS+RV+DF
Sbjct: 425 RKNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDF 484

Query: 490 NGKAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQI 549
           NGKAVGTISTSQLFIEPDFPEA  L+EWF++EGR+T SVSISREV  +GRTDVRKTISQI
Sbjct: 485 NGKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTISQI 544

Query: 550 KDERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 609
           KDERLGTSEKPDWITV ATVSFIKVD+FCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCD
Sbjct: 545 KDERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCD 604

Query: 610 QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEII 669
           QSVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMGI AK LYYLKYEEQDDEKF EI+
Sbjct: 605 QSVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEIL 664

Query: 670 RKVLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSAT 729
           R VLFTK+  KLK+KEE FSDEQRV+STVVKAE +NFSSESRFLL+++EK K E+S+   
Sbjct: 665 RGVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPL 724

Query: 730 PKAESTIHNFGFRDTASENIGGGQFVSPIR---NSTNFSREYGTP-NQGVQYGNQYSSSR 789
            K+E+ I N G  +    N+G  Q    +    N++N  R++G P NQGVQ+GNQY SS 
Sbjct: 725 -KSENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSG 784

Query: 790 PSPSTPLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPS-GGTSGECFK 849
            S +        CNSCGG+GHSS+NCPS+M  P  S GGG  S  ++GPS GGT+GEC+K
Sbjct: 785 LSATGSTGMXQSCNSCGGTGHSSSNCPSVMHSPRQSSGGGYVSRASTGPSAGGTTGECYK 844

Query: 850 CHQTGHWARDCPGLANVPPAYGNRG 858
           CHQ GHWARDCPGL   PPAYG+ G
Sbjct: 845 CHQFGHWARDCPGLNTGPPAYGSSG 865

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RFA1C_ARATH1.3e-25254.30Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana GN=RP... [more]
RFA1E_ARATH2.1e-23753.54Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana GN=RP... [more]
RFA1A_ARATH4.9e-19450.66Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana GN=RP... [more]
RFA1C_ORYSJ4.9e-19442.67Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japoni... [more]
RFA1A_ORYSJ1.5e-16658.76Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni... [more]
Match NameE-valueIdentityDescription
A0A0A0L503_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G005560 PE=4 SV=1[more]
F6I092_VITVI0.0e+0066.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0033g01170 PE=4 SV=... [more]
A5AQN6_VITVI0.0e+0066.47Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038295 PE=4 SV=1[more]
A0A067KU82_JATCU9.3e-31162.96Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02766 PE=4 SV=1[more]
A0A059CJ91_EUCGR8.1e-30560.20Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02593 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G45400.17.6e-25454.30 Replication factor-A protein 1-related[more]
AT4G19130.11.2e-23853.54 Replication factor-A protein 1-related[more]
AT2G06510.12.7e-19550.66 replication protein A 1A[more]
AT5G08020.11.4e-8236.27 RPA70-kDa subunit B[more]
AT5G61000.11.3e-8035.08 Replication factor-A protein 1-related[more]
Match NameE-valueIdentityDescription
gi|449456771|ref|XP_004146122.1|0.0e+00100.00PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus][more]
gi|659095462|ref|XP_008448593.1|0.0e+0097.56PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo][more]
gi|1009158592|ref|XP_015897369.1|0.0e+0067.51PREDICTED: replication protein A 70 kDa DNA-binding subunit A isoform X1 [Ziziph... [more]
gi|225427514|ref|XP_002264009.1|0.0e+0066.71PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Vitis vinifera][more]
gi|147856620|emb|CAN82475.1|0.0e+0066.47hypothetical protein VITISV_038295 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR004365NA-bd_OB_tRNA
IPR004591Rfa1
IPR007199Rep_factor-A_N
IPR012340NA-bd_OB-fold
IPR013955Rep_factor-A_C
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
GO:0006310DNA recombination
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU130919cucumber EST collection version 3.0transcribed_cluster
CU134602cucumber EST collection version 3.0transcribed_cluster
CU153971cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G005560.1Csa3G005560.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU130919CU130919transcribed_cluster
CU153971CU153971transcribed_cluster
CU134602CU134602transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 783..844
score: 1.8
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 829..844
score: 2.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 785..801
score: 0.037coord: 829..845
score: 1.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 830..844
score: 10.312coord: 786..801
score: 8
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 811..850
score: 3.6
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 279..364
score: 2.9
IPR004591Replication factor A protein 1TIGRFAMsTIGR00617TIGR00617coord: 243..707
score: 2.1E
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 10..110
score: 4.9
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 266..371
score: 5.8E-32coord: 559..708
score: 6.1E-49coord: 8..120
score: 1.0E-35coord: 382..512
score: 6.0
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 531..708
score: 3.38E-55coord: 8..117
score: 1.2E-27coord: 384..511
score: 6.57E-28coord: 265..378
score: 1.51
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 550..701
score: 5.9
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 198..818
score: 0.0coord: 32..122
score:
NoneNo IPR availablePANTHERPTHR23273:SF12REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT C-RELATEDcoord: 32..122
score: 0.0coord: 198..818
score: