Csa3G002600 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G002600
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionmRNA, clone: RTFL01-25-P14; contains IPR006016 (UspA)
LocationChr3 : 379165 .. 381615 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTTCTTCTTCTTTCTCGAATCACCTTCCCAACTTCCAACCTTTCTTCTTCTTAGTTCTTCCAATCTTCAATCTATGGCGGTTGCTCGTTGCTTCCTCCCTTTTCCTCTTGAGACTTCAAAGCATCCACTCTCTGCTTCCATTTTCACTTCTTCTTCTACTGATTTTTCCTTCGCTCTCGCCTTTTCTTCTAATTCTCGTCGCCCCCGAGGTTTTAAGCTCCCAATCACCACTCTCTGCTGCAAAATGCCCCATCGCAGTACGTTTCTTTTTATCCTTTCTTCCTCGTCCTTTTCCATCTTGAATATAATGTTGCTCTTTGATTTTTAGCTGCTTCAGCTTATTGGGTTTGTTGGAATCTGCGGTTTTTTTTTAGTCATGATTAATTTTGGATTCAGCATAACGCACTGAATTGATGGCTCTGTTGATTCATTTGGATTCAAATTTATGCAGGAACTAGATTTTTTAAAAGTAAGATTAAAGTTATGGTCCGTTTTTTTCTATTAAAATGTAGCCTGAGACTTAATCAATGACTAATTAGGAGTGCGAGGAACGATTACTAATGAGCGCCATAGCAAAAAACTAGTATTTTAACTTACAAAAAGTTTGTGTATATTATGCACTTCTTTTTGCTGCTTTGATCAAGAAAAAATATATTTTTCTTCAAGAGGAATCTTATCCATATAACTTTTCGGTGAAAAGTGAGCTTTCAAGTTTAGCTATAACTTTCAAATATGTATCTATTTGGTTCCTGAACTTTAAAAAGCGTACAATCTTGTGTTTGTTAGATTCTTTAATTTTAAAATTATCTAGCAAGCCTAAGAATTTTAAAAAATATTTAATACTTATATGTTCAACTAAAAATTGGAAGTCTTTAAAAGATATTTTTGAAGAAGACCGAAGGGAAAATTGAATTTCATTTAACCAAACTTTTCTTTTCTTAGGGACATGAAGAATGAGAGTATTCTAAATGGATTTCACCCATGATGTCCATTTTTATAAGTGTTCCATACGAAATAACAATTAGAAAACAAAGAATCTTAGTTTACTGGTAAATTCCTACTGCAGCAATACTTGTTGTACACAAACACAACTCTTAAGCAACTTCTTAGAAGGTTGGTGGTCAATTCTAGGTTGGGATAGTGAATTTCTTTAACATTGTGCTCGTTTTTATTTCTCTTAAGAGTTCTTTATAAGCGCGCCTTCTATGTGCATTTTTTCTTGTTATGCAAGTGAAACATGATTACTTCTATTAGCTCTTCACGTAACATAGTTTATAAATTGTTTGGCATCAGTAAAAGCCAAGCCACAAGATTCAGAAGCAACATTAGTTGCCGGCTCTTTCACTGAATTTAAACACCTGCTACTGCCAATAACCGATCGCAATCCATATCTTTCTGAGGGAACGAGACAGGTGACCGTTCTTTTGTTGCTTCAAATTTTGTTATTCAACAAGAATTTTGATTCAGACAAGAATGACATTACCTTTCCTATAGGGCAGCGTAGTTGTAAATCATTAGGAACATTTGTTTCTGTGGTTGCTTATTAGCCATCTAGATGTCTCTGTAGGAATTTCGGTTTCGAGTATCATTCTATTTATTCCAAATTCTACAGCTTATTATTCATATATCAGTAATGAAGAAGCTAGTGAGTAAAATTTGACAATTGATCACTAAGGTGGCTTTGGATCCGTATTTTGAACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGGGCTGACATAACAGTAGTCTGTATGTTCATTTCATTTTTGTTTTTCATATTTAGGATGCAAAGATCCTGAAATCACATCTCTGTGATAATCTGCAGTGATCGATGCAAAGCAGAAAGACTCGATTCCAGAGCACGAGAACCAACTCTCGAGCATTCGTTGGCATTTGTCTGAAGGTTTGTAGTAGTACATAAAACACTCTTTTAAGTTCGGACTTCAAGTCAAGAGACAAACAGTAAACTCAACCTCTTCAATCTACTTTCTCCGAACCGTAAAAACTTTGTTTGTAACATATTATTACGTATGCAACATTTAGTAAAGGTATATACAAACTAATCCAAGAAATCAACGTGTTTCTGTTTGAATGAGACAGGGGGATTCCAAGAGTTTAAACTGTTGGAGCGATTAGGGGAAGGAAGCAAGCCAACAGCAATCATTGGGGAGGTGGCTGATGATCTAAACTTAGATTTGGTAGTTCTAAGCATGGAAGCCATTCATTCCAAGCATGTGGATGCTAACCTACTGGCTGAGTTCATCCCATGCCCTGTTATGCTCTTGCCCTTGTGATTTTTGTACAATTTGAGTTTTATGCCTAAGCCATATCTTATCTATGCTTTCTCTAACAATATACTGTGTGTACTTGTGATTTATGTATATATTAATAAAGTGCTTTTGGAGTTCAATGAATCCCTTTTACATCATCGAG

mRNA sequence

ATGGCGGTTGCTCGTTGCTTCCTCCCTTTTCCTCTTGAGACTTCAAAGCATCCACTCTCTGCTTCCATTTTCACTTCTTCTTCTACTGATTTTTCCTTCGCTCTCGCCTTTTCTTCTAATTCTCGTCGCCCCCGAGGTTTTAAGCTCCCAATCACCACTCTCTGCTGCAAAATGCCCCATCGCATAAAAGCCAAGCCACAAGATTCAGAAGCAACATTAGTTGCCGGCTCTTTCACTGAATTTAAACACCTGCTACTGCCAATAACCGATCGCAATCCATATCTTTCTGAGGGAACGAGACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGGGCTGACATAACAGTAGTCTTGATCGATGCAAAGCAGAAAGACTCGATTCCAGAGCACGAGAACCAACTCTCGAGCATTCGTTGGCATTTGTCTGAAGGGGGATTCCAAGAGTTTAAACTGTTGGAGCGATTAGGGGAAGGAAGCAAGCCAACAGCAATCATTGGGGAGGTGGCTGATGATCTAAACTTAGATTTGGTAGTTCTAAGCATGGAAGCCATTCATTCCAAGCATGTGGATGCTAACCTACTGGCTGAGTTCATCCCATGCCCTGTTATGCTCTTGCCCTTGTGA

Coding sequence (CDS)

ATGGCGGTTGCTCGTTGCTTCCTCCCTTTTCCTCTTGAGACTTCAAAGCATCCACTCTCTGCTTCCATTTTCACTTCTTCTTCTACTGATTTTTCCTTCGCTCTCGCCTTTTCTTCTAATTCTCGTCGCCCCCGAGGTTTTAAGCTCCCAATCACCACTCTCTGCTGCAAAATGCCCCATCGCATAAAAGCCAAGCCACAAGATTCAGAAGCAACATTAGTTGCCGGCTCTTTCACTGAATTTAAACACCTGCTACTGCCAATAACCGATCGCAATCCATATCTTTCTGAGGGAACGAGACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGGGCTGACATAACAGTAGTCTTGATCGATGCAAAGCAGAAAGACTCGATTCCAGAGCACGAGAACCAACTCTCGAGCATTCGTTGGCATTTGTCTGAAGGGGGATTCCAAGAGTTTAAACTGTTGGAGCGATTAGGGGAAGGAAGCAAGCCAACAGCAATCATTGGGGAGGTGGCTGATGATCTAAACTTAGATTTGGTAGTTCTAAGCATGGAAGCCATTCATTCCAAGCATGTGGATGCTAACCTACTGGCTGAGTTCATCCCATGCCCTGTTATGCTCTTGCCCTTGTGA

Protein sequence

MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPHRIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL*
Homology
[Close]
BLAST of Csa3G002600 vs. TrEMBL
Match: A0A0A0L108_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002600 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 9.4e-114
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH
Sbjct: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60

Query: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120
           RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV
Sbjct: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120

Query: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180
           LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           VLSMEAIHSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]
BLAST of Csa3G002600 vs. TrEMBL
Match: D7T5Q2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0510g00010 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 5.2e-72
Identity = 151/211 (71.56%), Postives = 168/211 (79.62%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MA A   L  P + S  P S+S  +SS + FS  L+ SS+    +  KL I     K+ H
Sbjct: 1   MAFAHHLLTRPPKISILPSSSSSSSSSPSIFSLPLSSSSSPLCSKTSKLSIFPGLLKLGH 60

Query: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120
           R K+KPQDSE  L A +FT FKHLLLP+TDRNPYLSEGTRQA ATTAALAK  GADITVV
Sbjct: 61  RAKSKPQDSEVNLAAEAFTSFKHLLLPVTDRNPYLSEGTRQAAATTAALAKKYGADITVV 120

Query: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEG-SKPTAIIGEVADDLNLDL 180
           +ID KQK+SIPEH+ QLSSIRWHLSEGGFQEF++LERLGEG SKPTAIIGEVADDLNLDL
Sbjct: 121 VIDEKQKESIPEHDTQLSSIRWHLSEGGFQEFRVLERLGEGSSKPTAIIGEVADDLNLDL 180

Query: 181 VVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           VVLSMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 VVLSMEAIHSKHVDANLLAEFIPCPVLLLPL 211

[Close]
BLAST of Csa3G002600 vs. TrEMBL
Match: A0A067JMB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25356 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71
Identity = 145/215 (67.44%), Postives = 172/215 (80.00%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHP----LSASIFTSSSTDFSFA-LAFSSNSRRPRGFKLPITTLC 60
           MA A+  L  P+ETS HP    L+++  +SS+   S + L FSS+S   +  KL      
Sbjct: 1   MAFAQYLLAVPVETSTHPKITILNSTASSSSAASSSCSSLYFSSSSNWSKAQKLSFFPKL 60

Query: 61  CKMPHRIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGA 120
            ++ H+ KA PQ+SE +L A +FT FKHLLLPITDRNPYLSEGTRQA AT AALAK  GA
Sbjct: 61  QRIGHKAKAMPQESEVSLAADAFTHFKHLLLPITDRNPYLSEGTRQAAATAAALAKKYGA 120

Query: 121 DITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDL 180
           DITVV+ID K+++S+PEHE Q+SSIRWHLSEGGFQEFKLLERLGEG+KPTAIIG+VAD+L
Sbjct: 121 DITVVVIDEKERESLPEHETQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGDVADEL 180

Query: 181 NLDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           NLDLVV+SMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 NLDLVVISMEAIHSKHVDANLLAEFIPCPVLLLPL 215

[Close]
BLAST of Csa3G002600 vs. TrEMBL
Match: A0A061DGG9_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000147 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 5.8e-71
Identity = 149/214 (69.63%), Postives = 168/214 (78.50%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MA A C +  P+ETSKH    SI T SS +   +LAF+S+S      K    +   +  H
Sbjct: 1   MAFAHCLVAVPVETSKHS-KPSILTCSSNESLASLAFTSSSSFSLSSKARNLSFRPRN-H 60

Query: 61  RIK----AKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGAD 120
           RI+    A+PQ+SE  + A +FT FKHLLLPITD NPYLSEGTRQA  TTAALAK  GAD
Sbjct: 61  RIRPKANAEPQESEVNIAADAFTHFKHLLLPITDGNPYLSEGTRQAATTTAALAKKYGAD 120

Query: 121 ITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLN 180
           ITVV+ID KQK+++PEHE QLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLN
Sbjct: 121 ITVVVIDDKQKEALPEHETQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLN 180

Query: 181 LDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           LDLVV+SMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LDLVVMSMEAIHSKHVDANLLAEFIPCPVLLLPL 212

[Close]
BLAST of Csa3G002600 vs. TrEMBL
Match: A0A0D2QDV9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G006700 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-69
Identity = 141/214 (65.89%), Postives = 166/214 (77.57%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRR----PRGFKLPITTLCC 60
           MA A C    P++TS HP  +   +  ST+   +L F S S       +   L I     
Sbjct: 1   MAFAHCLFAVPMDTSIHPKISIPPSFCSTESPSSLPFPSFSSPFPPLSKARNLSIFPRIN 60

Query: 61  KMPHRIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGAD 120
           ++ H+ KA+P++SE  + A +F+ FKHLLLPITDRNPYLSEGTRQA ATTAALAK NGA+
Sbjct: 61  RVGHKEKAEPRESEVNIEADAFSHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKNGAE 120

Query: 121 ITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLN 180
           ITVV+ID KQK+S+PEHE QL+S+RWHLSE GF+EFKLLERLGEGSKPTAIIGEVADDLN
Sbjct: 121 ITVVVIDEKQKESLPEHETQLASVRWHLSESGFKEFKLLERLGEGSKPTAIIGEVADDLN 180

Query: 181 LDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           LDLVV+SMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LDLVVMSMEAIHSKHVDANLLAEFIPCPVLLLPL 214

[Close]
BLAST of Csa3G002600 vs. TAIR10
Match: AT5G66090.1 (AT5G66090.1 unknown protein)

HSP 1 Score: 222.6 bits (566), Expect = 2.2e-58
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 1 

Query: 26  SSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPHRIKAKPQDSEATL----VAGSFTEF 85
           SSS+  S     SS   +PR   L + ++  K   R+KA+ +++EA+     V  +F+  
Sbjct: 24  SSSSSSSALYPLSSLRSKPRQQLLSLRSVALK--GRVKAQAKEAEASPSPVGVGDAFSNV 83

Query: 86  KHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVVLIDAKQKDSIPEHENQLSSIR 145
           KHLLLP+ DRNPYLSEGTRQA ATT +LAK  GADITVV+ID ++++S  EHE Q+S+IR
Sbjct: 84  KHLLLPVIDRNPYLSEGTRQAAATTTSLAKKYGADITVVVIDEEKRESSSEHETQVSNIR 143

Query: 146 WHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLVVLSMEAIHSKHVDANLLAEFI 205
           WHLSEGGF+EFKLLERLGEG K TAIIGEVAD+L ++LVV+SMEAIHSK++DANLLAEFI
Sbjct: 144 WHLSEGGFEEFKLLERLGEGKKATAIIGEVADELKMELVVMSMEAIHSKYIDANLLAEFI 203

Query: 206 PCPVMLLPL 211
           PCPV+LLPL
Sbjct: 204 PCPVLLLPL 210

[Close]
BLAST of Csa3G002600 vs. NCBI nr
Match: gi|449456841|ref|XP_004146157.1| (PREDICTED: uncharacterized protein LOC101219661 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 1.3e-113
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH
Sbjct: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60

Query: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120
           RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV
Sbjct: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120

Query: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180
           LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           VLSMEAIHSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]
BLAST of Csa3G002600 vs. NCBI nr
Match: gi|659095322|ref|XP_008448520.1| (PREDICTED: uncharacterized protein LOC103490671 [Cucumis melo])

HSP 1 Score: 393.3 bits (1009), Expect = 2.7e-106
Identity = 199/210 (94.76%), Postives = 202/210 (96.19%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MAVARCFLPF LETSKHPLS SIFTSSSTD SF LAF S+ RRPRGFK PITTLCCKM H
Sbjct: 1   MAVARCFLPFSLETSKHPLSPSIFTSSSTDCSFTLAFPSDYRRPRGFKPPITTLCCKMIH 60

Query: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120
           R+KAKPQDSEATLVAGSFTEFKHLLLPITDRNP+LSEGTRQAIATTAALAKNNGADITVV
Sbjct: 61  RVKAKPQDSEATLVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITVV 120

Query: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180
           LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           VLSMEAIHSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]
BLAST of Csa3G002600 vs. NCBI nr
Match: gi|1009144329|ref|XP_015889739.1| (PREDICTED: uncharacterized protein LOC107424443 [Ziziphus jujuba])

HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72
Identity = 145/214 (67.76%), Postives = 172/214 (80.37%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHP----LSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCC 60
           MA   C +  P ETS+HP    L +S+ +SSS +  F+LAFSS S   R       +   
Sbjct: 1   MAFVHCPVTVPFETSRHPKTSILESSLSSSSSHESLFSLAFSSASHWSRARNRSRFSKLS 60

Query: 61  KMPHRIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGAD 120
            + +++KA+PQ++  +L A +FT FKHLLLPITDRNPYLSEGTRQA+AT AA+AK  GA+
Sbjct: 61  PLEYKVKAQPQEANLSL-ADAFTHFKHLLLPITDRNPYLSEGTRQAVATAAAMAKKYGAE 120

Query: 121 ITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLN 180
           ITVV+ID KQKDS+PEHE QLSSIRWHLSEGGFQEFKLLERLGEG+KPTAIIGEVADDLN
Sbjct: 121 ITVVVIDEKQKDSLPEHETQLSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGEVADDLN 180

Query: 181 LDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           LDLV++SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LDLVIISMEAVHSKHVDANLLAEFIPCPVILLPL 213

[Close]
BLAST of Csa3G002600 vs. NCBI nr
Match: gi|225431334|ref|XP_002277779.1| (PREDICTED: uncharacterized protein LOC100248935 [Vitis vinifera])

HSP 1 Score: 278.9 bits (712), Expect = 7.5e-72
Identity = 151/211 (71.56%), Postives = 168/211 (79.62%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60
           MA A   L  P + S  P S+S  +SS + FS  L+ SS+    +  KL I     K+ H
Sbjct: 1   MAFAHHLLTRPPKISILPSSSSSSSSSPSIFSLPLSSSSSPLCSKTSKLSIFPGLLKLGH 60

Query: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120
           R K+KPQDSE  L A +FT FKHLLLP+TDRNPYLSEGTRQA ATTAALAK  GADITVV
Sbjct: 61  RAKSKPQDSEVNLAAEAFTSFKHLLLPVTDRNPYLSEGTRQAAATTAALAKKYGADITVV 120

Query: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEG-SKPTAIIGEVADDLNLDL 180
           +ID KQK+SIPEH+ QLSSIRWHLSEGGFQEF++LERLGEG SKPTAIIGEVADDLNLDL
Sbjct: 121 VIDEKQKESIPEHDTQLSSIRWHLSEGGFQEFRVLERLGEGSSKPTAIIGEVADDLNLDL 180

Query: 181 VVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           VVLSMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 VVLSMEAIHSKHVDANLLAEFIPCPVLLLPL 211

[Close]
BLAST of Csa3G002600 vs. NCBI nr
Match: gi|802753361|ref|XP_012088474.1| (PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas])

HSP 1 Score: 276.2 bits (705), Expect = 4.9e-71
Identity = 145/215 (67.44%), Postives = 172/215 (80.00%), Query Frame = 1 

Query: 1   MAVARCFLPFPLETSKHP----LSASIFTSSSTDFSFA-LAFSSNSRRPRGFKLPITTLC 60
           MA A+  L  P+ETS HP    L+++  +SS+   S + L FSS+S   +  KL      
Sbjct: 1   MAFAQYLLAVPVETSTHPKITILNSTASSSSAASSSCSSLYFSSSSNWSKAQKLSFFPKL 60

Query: 61  CKMPHRIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGA 120
            ++ H+ KA PQ+SE +L A +FT FKHLLLPITDRNPYLSEGTRQA AT AALAK  GA
Sbjct: 61  QRIGHKAKAMPQESEVSLAADAFTHFKHLLLPITDRNPYLSEGTRQAAATAAALAKKYGA 120

Query: 121 DITVVLIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDL 180
           DITVV+ID K+++S+PEHE Q+SSIRWHLSEGGFQEFKLLERLGEG+KPTAIIG+VAD+L
Sbjct: 121 DITVVVIDEKERESLPEHETQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGDVADEL 180

Query: 181 NLDLVVLSMEAIHSKHVDANLLAEFIPCPVMLLPL 211
           NLDLVV+SMEAIHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 NLDLVVISMEAIHSKHVDANLLAEFIPCPVLLLPL 215

The following BLAST results are available for this feature:
BLAST of Csa3G002600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L108_CUCSA9.4e-114100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002600 PE=4 SV=1[more]
D7T5Q2_VITVI5.2e-7271.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0510g00010 PE=4 SV=... [more]
A0A067JMB9_JATCU3.4e-7167.44Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25356 PE=4 SV=1[more]
A0A061DGG9_THECC5.8e-7169.63Uncharacterized protein OS=Theobroma cacao GN=TCM_000147 PE=4 SV=1[more]
A0A0D2QDV9_GOSRA3.2e-6965.89Uncharacterized protein OS=Gossypium raimondii GN=B456_003G006700 PE=4 SV=1[more]
BLAST of Csa3G002600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66090.12.2e-5861.90 unknown protein[more]
BLAST of Csa3G002600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456841|ref|XP_004146157.1|1.3e-113100.00PREDICTED: uncharacterized protein LOC101219661 [Cucumis sativus][more]
gi|659095322|ref|XP_008448520.1|2.7e-10694.76PREDICTED: uncharacterized protein LOC103490671 [Cucumis melo][more]
gi|1009144329|ref|XP_015889739.1|2.6e-7267.76PREDICTED: uncharacterized protein LOC107424443 [Ziziphus jujuba][more]
gi|225431334|ref|XP_002277779.1|7.5e-7271.56PREDICTED: uncharacterized protein LOC100248935 [Vitis vinifera][more]
gi|802753361|ref|XP_012088474.1|4.9e-7167.44PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102474cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G002600.1Csa3G002600.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU102474CU102474transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3DG3DSA:3.40.50.620coord: 81..183
score: 1.
NoneNo IPR availablePANTHERPTHR36081FAMILY NOT NAMEDcoord: 7..210
score: 2.4
NoneNo IPR availablePANTHERPTHR36081:SF1SUBFAMILY NOT NAMEDcoord: 7..210
score: 2.4
NoneNo IPR availableunknownSSF52402Adenine nucleotide alpha hydrolases-likecoord: 82..209
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G002600Cla008918Watermelon (97103) v1cuwmB200
Csa3G002600MELO3C013747Melon (DHL92) v3.5.1cumeB243
Csa3G002600ClCG10G000510Watermelon (Charleston Gray)cuwcgB189
Csa3G002600MELO3C013747.2Melon (DHL92) v3.6.1cumedB224
Csa3G002600Cla97C10G185070Watermelon (97103) v2cuwmbB181
Csa3G002600Bhi11G000250Wax gourdcuwgoB226
Csa3G002600CSPI03G00550Wild cucumber (PI 183967)cpicuB120
Csa3G002600Cucsa.322830Cucumber (Gy14) v1cgycuB458
Csa3G002600CmoCh06G001230Cucurbita moschata (Rifu)cmocuB817
Csa3G002600Cp4.1LG08g13000Cucurbita pepo (Zucchini)cpecuB851
Csa3G002600Carg01201Silver-seed gourdcarcuB0173
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G002600Cucumber (Gy14) v2cgybcuB266
Csa3G002600Melon (DHL92) v3.6.1cumedB252
Csa3G002600Silver-seed gourdcarcuB0436
Csa3G002600Silver-seed gourdcarcuB0462
Csa3G002600Silver-seed gourdcarcuB0662
Csa3G002600Watermelon (97103) v2cuwmbB178
Csa3G002600Wax gourdcuwgoB326
Csa3G002600Cucumber (Chinese Long) v2cucuB119
Csa3G002600Cucumber (Gy14) v1cgycuB024
Csa3G002600Cucurbita maxima (Rimu)cmacuB326
Csa3G002600Cucurbita maxima (Rimu)cmacuB658
Csa3G002600Cucurbita maxima (Rimu)cmacuB827
Csa3G002600Cucurbita maxima (Rimu)cmacuB854
Csa3G002600Cucurbita moschata (Rifu)cmocuB316
Csa3G002600Cucurbita moschata (Rifu)cmocuB646
Csa3G002600Cucurbita moschata (Rifu)cmocuB842
Csa3G002600Melon (DHL92) v3.5.1cumeB262
Csa3G002600Watermelon (Charleston Gray)cuwcgB209
Csa3G002600Watermelon (97103) v1cuwmB261
Csa3G002600Cucurbita pepo (Zucchini)cpecuB069
Csa3G002600Cucurbita pepo (Zucchini)cpecuB212
Csa3G002600Cucurbita pepo (Zucchini)cpecuB484
Csa3G002600Cucurbita pepo (Zucchini)cpecuB555
Csa3G002600Bottle gourd (USVL1VR-Ls)culsiB165
Csa3G002600Bottle gourd (USVL1VR-Ls)culsiB228
Csa3G002600Cucumber (Gy14) v2cgybcuB109