CmoCh06G001230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh06G001230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	COS26 protein
Location	Cmo_Chr06 : 684767 .. 688881 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCACTCCCTTCTCCCTTTCTCTCTGCTGTTTCTCGAAACACCTCCCAAGTTCCAACCTTCTTCTTCTTCTTCCAGCTATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGGTATGTTTCTCTATCTATTTATTTTTCGTATTTCATCTGATTTGCCTCTCACTGTCCCACTCTCTCCTTTGCTTCATTTTTTTGTAAATTGTATTGTTGCTCTCCGATTGTATGGCGCTTAAGTTTATCGGGTGGTGGTAGATTCTTTTTTGGTTCTGTTGCGAATGTAGGGTTATGTGACGCTTCATTTCTTTGATTAATGTCTTGGTTTGTGATTCAGTATTTTTGGAGGACGATTTTGTTCTGCTACTGACACTTGTGAGCTCATGCTGTGAATTGATGGCTATATTGATCTAATTTGGAATCAATTCTATTCAGGAACTGGATTTTGAAACACATTTTTGGCCTTTAAAACTGTAACGATTGGATCCAGATGCTAAGATTCTTGTTAAGATCAAGTAGTGGATAATTGAACTACCTTTAGTGTGTTATGGTAGGTTTCACTCACTTTCCTATTATCAAGTGCAAATTTTAATTAAAATTTGACTTCAGACTTATTCAAGGATAAATAAAAGTGAGGACCGAAGTATAATAAGCGCCATGGCAGAAGAAAAAGAAAATTGTATACTATGGGTTCCCTTTACGCCTTTTTATCGAAACCCATTTTTCTTTTTGCTTCTTTGCATCAAAGTTCTTCTGTAATTTTTTTTTTCTGAAGAGGAATCTTATCTTTGTAACTTTTGTTTCTTAGGGACGTGTGGAATAAGGGAGTATTCTGCCTTTTTATGTACTGATTGAATTTTACTCCTTTTGTTGACAATTTTGTTGTACACAACTCTTGAGCAACTTCAAAGCAGATTGGCGGTGAATTCTAGAATGAGATAGTGAACCTTTAACATTGTGTTGAATTTTATATCTCTGAAACGTTCTTAGTAAGTTCACTTTTTTTTTTTTTGTTTGATAAGTGACAATTTCATTGATGATTGAAATTTACAAATTTACAAAAGGGATGTATAATCCATGGTGTTTACAAAAGACCTTCCCAACGAGGGAGGTATAACTCTAGGAAGTAAAAATTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNAAACACCTCCCAAGTTCCAACCTTCTTCTTCTTCTTCCAGCTATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGGTATGTTTCTCTATCTATTTATTTTTCGTATTTCATCTGATTTGCCTCTCACTGTCCCACTCTCTCCTTTGCTTCATTTTTTTGTAAATTGTATTGTTGCTCTCCGATTGTATGGCGCTTAAGTTTATCGGGTGGTGGTAGATTCTTTTTTGGTTCTGTTGCGAATGTAGGGTTATGTGACGCTTCATTTCTTTGATTAATGTCTTGGTTTGTGATTCAGTATTTTTGGAGGACGATTTTGTTCTGCTACTGACACTTGTGAGCTCATGCTGTGAATTGATGGCTATATTGATCTAATTTGGAATCAATTCTATTCAGGAACTGGATTTTGAAACACATTTTTGGCCTTTAAAACTGTAACGATTGGATCCAGATGCTAAGATTCTTGTTAAGATCAAGTAGTGGATAATTGAACTACCTTTAGTGTGTTATGGTAGGTTTCACTCACTTTCCTATTATCAAGTGCAAATTTTAATTAAAATTTGACTTCAGACTTATTCAAGGATAAATAAAAGTGAGGACCGAAGTATAATAAGCGCCATGGCAGAAGAAAAAGAAAATTGTATACTATGGGTTCCCTTTACGCCTTTTTATCGAAACCCATTTTTCTTTTTGCTTCTTTGCATCAAAGTTCTTCTGTAATTTTTTTTTTCTGAAGAGGAATCTTATCTTTGTAACTTTTGTTTCTTAGGGACGTGTGGAATAAGGGAGTATTCTGCCTTTTTATGTACTGATTGAATTTTACTCCTTTTGTTGACAATTTTGTTGTACACAACTCTTGAGCAACTTCAAAGCAGATTGGCGGTGAATTCTAGAATGAGATAGTGAACCTTTAACATTGTGTTGAATTTTATATCTCTGAAACGTTCTTAGTAAGTTCACTTTTTTTTTTTTTGTTTGATAAGTGACAATTTCATTGATGATTGAAATTTACAAATTTACAAAAGGGATGTATAATCCATGGTGTTTACAAAAGACCTTCCCAACGAGGGAGGTATAACTCTAGGAAGTAAAAATTCTTTTTTTTTTTTTTTTTTTTTTTTGTTTTGCAAGTGAAGCTTGAACCTTCTATGAGCTCATTGAATTTACATAACATAGTTTGAAACTTGTTTGATATCAGTGAAAGCCAAGCCACATGATTCGGAAGCAACAGTAGTTGCCGGCTCCTTCACTGAATTCAAACACCTGCTGCTTCCAATAACTGATCGCAATCCTTTTCTTTCAGAGGGAACGAGACAGGTGACCATTCGTCGGTTTCTAGCGTCATTTTGTTTATTATAATTGTTAGGGCGTATTCATTAGACGTTGCTGAGTAGAATTTCATGATTGATCTCTTCTTCTGTGCTGAAACAACTCTCATGTACCCAAGGATTTCAAGTTCTAAGGTGGCTTTGGATCCATATTTTTAACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGAGCTGACATAACAGTAATCTGTATGTTCGTTTCATCTTTCCTTTTTATCTCTAGGATGCATAACTCTTGAAATCAAATCTTCATGGTTTCCACAGTGATTGATGAAAAGCAGAAAGAATCGTTTCCAGAGCACGAGAACCAGCTCTCGAGCATTCGTTGGCATTTGTCTGAAGGTTTGTAGGTGTACATAACTCTTTTAAGTCTGGTTCTGTGCTAGGTTCTATGTTTCTCGATTTTTTTTTTTTTTTTTTTGAAATTNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCAGTTCGAACTTCACATTGATGTTGCAATATTCATCAAGTCAAAGGGTCAAGCAGTATTGATAGCCTCTTTAATGTCATCCATTAGGTAATATTATTAGAGATTGAGTGATTAGATTAATTAATCGGAGACATGACACAGGTGGATTCCAAGAGTATAAATTGTTAGAGCGGCTGGGGGATGGGAGCAAGCCAACAGCAATCATTGGGGAGGTAGCGGATGATCTGAACTTAGATTTGGTAGTTCTAAGCATGGAGGCTGTTCATTCTAAGCATGTGGATGCAAACCTTTTGGCTGAGTTCATTCCATGCCCGGTTATGCTCTTACCACTTTGATTTCTGTACATTTTGTGACCAATATCCAAGTTTTATGGAGTCGTGTTGCATGTTTTTCTGTAATAATATATTGGGTATACTTGTGATTTATGTATAAATTGCTTTTGGAGTTGATATGGGCCATGTTAATATTATATATATATTAAACACTCTCATGGCCTAAAATAGCACGCAACTCACTCAACCGTGAAGAGTACTCATTGTCCCTAGCTTATCACTCAACCACGAAGAGTACTCATTGTCCCTAGCTTATCACTCAACCACGAAGAATACTCATTGTCTCTAGCTTATCACTCAACCGTGAAGAATACTCATTGTCCCTTGCTTATCACATCGTGCTAGCTTATCACATAGTGCAATGGTTGAGTTTCTGCAAGAATATTAAACTAAATACTCC

mRNA sequence

GTTTTCACTCCCTTCTCCCTTTCTCTCTGCTGTTTCTCGAAACACCTCCCAAGTTCCAACCTTCTTCTTCTTCTTCCAGCTATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGCTATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGTGAAAGCCAAGCCACATGATTCGGAAGCAACAGTAGTTGCCGGCTCCTTCACTGAATTCAAACACCTGCTGCTTCCAATAACTGATCGCAATCCTTTTCTTTCAGAGGGAACGAGACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGAGCTGACATAACAGTAATCTTGATTGATGAAAAGCAGAAAGAATCGTTTCCAGAGCACGAGAACCAGCTCTCGAGCATTCGTTGGCATTTGTCTGAAGGTGGATTCCAAGAGTATAAATTGTTAGAGCGGCTGGGGGATGGGAGCAAGCCAACAGCAATCATTGGGGAGGTAGCGGATGATCTGAACTTAGATTTGGTAGTTCTAAGCATGGAGGCTGTTCATTCTAAGCATGTGGATGCAAACCTTTTGGCTGAGTTCATTCCATGCCCGGTTATGCTCTTACCACTTTGATTTCTGTACATTTTGTGACCAATATCCAAGTTTTATGGAGTCGTGTTGCATGTTTTTCTGTAATAATATATTGGGTATACTTGTGATTTATGTATAAATTGCTTTTGGAGTTGATATGGGCCATGTTAATATTATATATATATTAAACACTCTCATGGCCTAAAATAGCACGCAACTCACTCAACCGTGAAGAGTACTCATTGTCCCTAGCTTATCACTCAACCACGAAGAGTACTCATTGTCCCTAGCTTATCACTCAACCACGAAGAATACTCATTGTCTCTAGCTTATCACTCAACCGTGAAGAATACTCATTGTCCCTTGCTTATCACATCGTGCTAGCTTATCACATAGTGCAATGGTTGAGTTTCTGCAAGAATATTAAACTAAATACTCC

Coding sequence (CDS)

ATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGCTATGGCGTTTGCTCGCTGCTTGCTCCCTCTTCCTCTCGAGACTTTGAAGCATCCCACTTCTTCAATTTTCGCTTCTTCTTCTTCCACTCAATGTTCTTTCACTGTCGCGTTTAATTCCGCTTCTCGTCGGCGCGGTGATTTTAATCTCCCAATCTCCACTCTCTGCTGCAAAACGGGCCATCGCGTGAAAGCCAAGCCACATGATTCGGAAGCAACAGTAGTTGCCGGCTCCTTCACTGAATTCAAACACCTGCTGCTTCCAATAACTGATCGCAATCCTTTTCTTTCAGAGGGAACGAGACAGGCTATTGCTACTACTGCTGCTTTGGCAAAGAACAATGGAGCTGACATAACAGTAATCTTGATTGATGAAAAGCAGAAAGAATCGTTTCCAGAGCACGAGAACCAGCTCTCGAGCATTCGTTGGCATTTGTCTGAAGGTGGATTCCAAGAGTATAAATTGTTAGAGCGGCTGGGGGATGGGAGCAAGCCAACAGCAATCATTGGGGAGGTAGCGGATGATCTGAACTTAGATTTGGTAGTTCTAAGCATGGAGGCTGTTCATTCTAAGCATGTGGATGCAAACCTTTTGGCTGAGTTCATTCCATGCCCGGTTATGCTCTTACCACTTTGA

Homology

[Close]

BLAST of CmoCh06G001230 vs. TrEMBL
Match: A0A0A0L108_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002600 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.1e-93
Identity = 176/210 (83.81%), Postives = 189/210 (90.00%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQCSFTVAFNSASRRRGDFNLPISTLCCKTGH 122
           MA ARC LP PLET KHP S+   +SSST  SF +AF+S SRR   F LPI+TLCCK  H
Sbjct: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60

Query: 123 RVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITVI 182
           R+KAKP DSEAT+VAGSFTEFKHLLLPITDRNP+LSEGTRQAIATTAALAKNNGADITV+
Sbjct: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120

Query: 183 LIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADDLNLDLV 242
           LID KQK+S PEHENQLSSIRWHLSEGGFQE+KLLERLG+GSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 243 VLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           VLSMEA+HSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]

BLAST of CmoCh06G001230 vs. TrEMBL
Match: A0A0D2QDV9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G006700 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71
Identity = 145/217 (66.82%), Postives = 170/217 (78.34%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQC-------SFTVAFNSASRRRGDFNLPIST 122
           MAFA CL  +P++T  HP  SI  S  ST+        SF+  F   S+ R   NL I  
Sbjct: 1   MAFAHCLFAVPMDTSIHPKISIPPSFCSTESPSSLPFPSFSSPFPPLSKAR---NLSIFP 60

Query: 123 LCCKTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNN 182
              + GH+ KA+P +SE  + A +F+ FKHLLLPITDRNP+LSEGTRQA ATTAALAK N
Sbjct: 61  RINRVGHKEKAEPRESEVNIEADAFSHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKN 120

Query: 183 GADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVAD 242
           GA+ITV++IDEKQKES PEHE QL+S+RWHLSE GF+E+KLLERLG+GSKPTAIIGEVAD
Sbjct: 121 GAEITVVVIDEKQKESLPEHETQLASVRWHLSESGFKEFKLLERLGEGSKPTAIIGEVAD 180

Query: 243 DLNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           DLNLDLVV+SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 DLNLDLVVMSMEAIHSKHVDANLLAEFIPCPVLLLPL 214

[Close]

BLAST of CmoCh06G001230 vs. TrEMBL
Match: A0A067JMB9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25356 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 8.2e-70
Identity = 140/216 (64.81%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIF------ASSSSTQCSFTVAFNSASRRRGDFNLPISTL 122
           MAFA+ LL +P+ET  HP  +I       +S++S+ CS ++ F+S+S       L     
Sbjct: 1   MAFAQYLLAVPVETSTHPKITILNSTASSSSAASSSCS-SLYFSSSSNWSKAQKLSFFPK 60

Query: 123 CCKTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNG 182
             + GH+ KA P +SE ++ A +FT FKHLLLPITDRNP+LSEGTRQA AT AALAK  G
Sbjct: 61  LQRIGHKAKAMPQESEVSLAADAFTHFKHLLLPITDRNPYLSEGTRQAAATAAALAKKYG 120

Query: 183 ADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADD 242
           ADITV++IDEK++ES PEHE Q+SSIRWHLSEGGFQE+KLLERLG+G+KPTAIIG+VAD+
Sbjct: 121 ADITVVVIDEKERESLPEHETQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGDVADE 180

Query: 243 LNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           LNLDLVV+SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LNLDLVVISMEAIHSKHVDANLLAEFIPCPVLLLPL 215

[Close]

BLAST of CmoCh06G001230 vs. TrEMBL
Match: A0A0B0PN47_GOSAR (Universal stress protein OS=Gossypium arboreum GN=F383_07827 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.4e-69
Identity = 141/216 (65.28%), Postives = 167/216 (77.31%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQCSFTVAFNSASRRRGDFNLPISTLCC---- 122
           MAFA  L  +P++T  HP  SI  S  S +   ++ F S       F+ P  TL      
Sbjct: 1   MAFAHYLFAVPMDTSIHPKISIPPSFCSIESPSSLPFPS-------FSSPFPTLSKARTR 60

Query: 123 --KTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNG 182
             + GH+ KA+P +SE  + A +F+ FKHLLLPITDRNP+LSEGTRQA ATTAALAK NG
Sbjct: 61  INRVGHKAKAEPRESEVNIEADAFSHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKNG 120

Query: 183 ADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADD 242
           ADITV++IDEKQKES PEHE QL+S+RWHLSE GF+E+KLLERLG+GSKPTAIIGEVAD+
Sbjct: 121 ADITVVVIDEKQKESLPEHETQLASVRWHLSESGFKEFKLLERLGEGSKPTAIIGEVADE 180

Query: 243 LNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           LNLDLVV+SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LNLDLVVMSMEAIHSKHVDANLLAEFIPCPVLLLPL 209

[Close]

BLAST of CmoCh06G001230 vs. TrEMBL
Match: B9SYR8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0361210 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.1e-69
Identity = 144/216 (66.67%), Postives = 168/216 (77.78%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQC-----SFTVAFN-SASRRRGDFNLPISTL 122
           M F+  LL +P +   HP ++    SSST       S +V+F+ S + +R  F   +  +
Sbjct: 1   MGFSNYLLAVPTDAAIHPKTTFLNPSSSTTTTTITDSLSVSFSYSFTPKRLSFFPSVPAI 60

Query: 123 CCKTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNG 182
               GH+VKAK  +SE  V A +FT FKHLLLPITDRNP+LSEGTRQA ATTAALAK  G
Sbjct: 61  ----GHKVKAKAQESEVNVAADTFTHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKYG 120

Query: 183 ADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADD 242
           ADITV++ID KQKES PEHE Q+SSIRWHLSEGGFQE+KLLERLG+G+KPTAIIGEVADD
Sbjct: 121 ADITVVVIDAKQKESLPEHEAQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGEVADD 180

Query: 243 LNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           LNLDLVVLSMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LNLDLVVLSMEAIHSKHVDANLLAEFIPCPVLLLPL 212

[Close]

BLAST of CmoCh06G001230 vs. TAIR10
Match: AT5G66090.1 (AT5G66090.1 unknown protein)

HSP 1 Score: 215.7 bits (548), Expect = 3.5e-56
Identity = 105/154 (68.18%), Postives = 132/154 (85.71%), Query Frame = 1


Query: 123 RVKAKPHDSEATV----VAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGAD 182
           RVKA+  ++EA+     V  +F+  KHLLLP+ DRNP+LSEGTRQA ATT +LAK  GAD
Sbjct: 57  RVKAQAKEAEASPSPVGVGDAFSNVKHLLLPVIDRNPYLSEGTRQAAATTTSLAKKYGAD 116

Query: 183 ITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADDLN 242
           ITV++IDE+++ES  EHE Q+S+IRWHLSEGGF+E+KLLERLG+G K TAIIGEVAD+L 
Sbjct: 117 ITVVVIDEEKRESSSEHETQVSNIRWHLSEGGFEEFKLLERLGEGKKATAIIGEVADELK 176

Query: 243 LDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           ++LVV+SMEA+HSK++DANLLAEFIPCPV+LLPL
Sbjct: 177 MELVVMSMEAIHSKYIDANLLAEFIPCPVLLLPL 210

[Close]

BLAST of CmoCh06G001230 vs. NCBI nr
Match: gi|449456841|ref|XP_004146157.1| (PREDICTED: uncharacterized protein LOC101219661 [Cucumis sativus])

HSP 1 Score: 351.3 bits (900), Expect = 1.5e-93
Identity = 176/210 (83.81%), Postives = 189/210 (90.00%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQCSFTVAFNSASRRRGDFNLPISTLCCKTGH 122
           MA ARC LP PLET KHP S+   +SSST  SF +AF+S SRR   F LPI+TLCCK  H
Sbjct: 1   MAVARCFLPFPLETSKHPLSASIFTSSSTDFSFALAFSSNSRRPRGFKLPITTLCCKMPH 60

Query: 123 RVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITVI 182
           R+KAKP DSEAT+VAGSFTEFKHLLLPITDRNP+LSEGTRQAIATTAALAKNNGADITV+
Sbjct: 61  RIKAKPQDSEATLVAGSFTEFKHLLLPITDRNPYLSEGTRQAIATTAALAKNNGADITVV 120

Query: 183 LIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADDLNLDLV 242
           LID KQK+S PEHENQLSSIRWHLSEGGFQE+KLLERLG+GSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 243 VLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           VLSMEA+HSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]

BLAST of CmoCh06G001230 vs. NCBI nr
Match: gi|659095322|ref|XP_008448520.1| (PREDICTED: uncharacterized protein LOC103490671 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92
Identity = 177/210 (84.29%), Postives = 186/210 (88.57%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQCSFTVAFNSASRRRGDFNLPISTLCCKTGH 122
           MA ARC LP  LET KHP S    +SSST CSFT+AF S  RR   F  PI+TLCCK  H
Sbjct: 1   MAVARCFLPFSLETSKHPLSPSIFTSSSTDCSFTLAFPSDYRRPRGFKPPITTLCCKMIH 60

Query: 123 RVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITVI 182
           RVKAKP DSEAT+VAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITV+
Sbjct: 61  RVKAKPQDSEATLVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGADITVV 120

Query: 183 LIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADDLNLDLV 242
           LID KQK+S PEHENQLSSIRWHLSEGGFQE+KLLERLG+GSKPTAIIGEVADDLNLDLV
Sbjct: 121 LIDAKQKDSIPEHENQLSSIRWHLSEGGFQEFKLLERLGEGSKPTAIIGEVADDLNLDLV 180

Query: 243 VLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           VLSMEA+HSKHVDANLLAEFIPCPVMLLPL
Sbjct: 181 VLSMEAIHSKHVDANLLAEFIPCPVMLLPL 210

[Close]

BLAST of CmoCh06G001230 vs. NCBI nr
Match: gi|823138888|ref|XP_012469284.1| (PREDICTED: uncharacterized protein LOC105787442 [Gossypium raimondii])

HSP 1 Score: 278.1 bits (710), Expect = 1.6e-71
Identity = 145/217 (66.82%), Postives = 170/217 (78.34%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIFASSSSTQC-------SFTVAFNSASRRRGDFNLPIST 122
           MAFA CL  +P++T  HP  SI  S  ST+        SF+  F   S+ R   NL I  
Sbjct: 1   MAFAHCLFAVPMDTSIHPKISIPPSFCSTESPSSLPFPSFSSPFPPLSKAR---NLSIFP 60

Query: 123 LCCKTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNN 182
              + GH+ KA+P +SE  + A +F+ FKHLLLPITDRNP+LSEGTRQA ATTAALAK N
Sbjct: 61  RINRVGHKEKAEPRESEVNIEADAFSHFKHLLLPITDRNPYLSEGTRQAAATTAALAKKN 120

Query: 183 GADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVAD 242
           GA+ITV++IDEKQKES PEHE QL+S+RWHLSE GF+E+KLLERLG+GSKPTAIIGEVAD
Sbjct: 121 GAEITVVVIDEKQKESLPEHETQLASVRWHLSESGFKEFKLLERLGEGSKPTAIIGEVAD 180

Query: 243 DLNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           DLNLDLVV+SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 DLNLDLVVMSMEAIHSKHVDANLLAEFIPCPVLLLPL 214

[Close]

BLAST of CmoCh06G001230 vs. NCBI nr
Match: gi|802753361|ref|XP_012088474.1| (PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas])

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 140/216 (64.81%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIF------ASSSSTQCSFTVAFNSASRRRGDFNLPISTL 122
           MAFA+ LL +P+ET  HP  +I       +S++S+ CS ++ F+S+S       L     
Sbjct: 1   MAFAQYLLAVPVETSTHPKITILNSTASSSSAASSSCS-SLYFSSSSNWSKAQKLSFFPK 60

Query: 123 CCKTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNG 182
             + GH+ KA P +SE ++ A +FT FKHLLLPITDRNP+LSEGTRQA AT AALAK  G
Sbjct: 61  LQRIGHKAKAMPQESEVSLAADAFTHFKHLLLPITDRNPYLSEGTRQAAATAAALAKKYG 120

Query: 183 ADITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADD 242
           ADITV++IDEK++ES PEHE Q+SSIRWHLSEGGFQE+KLLERLG+G+KPTAIIG+VAD+
Sbjct: 121 ADITVVVIDEKERESLPEHETQMSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGDVADE 180

Query: 243 LNLDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           LNLDLVV+SMEA+HSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LNLDLVVISMEAIHSKHVDANLLAEFIPCPVLLLPL 215

[Close]

BLAST of CmoCh06G001230 vs. NCBI nr
Match: gi|1009144329|ref|XP_015889739.1| (PREDICTED: uncharacterized protein LOC107424443 [Ziziphus jujuba])

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 141/214 (65.89%), Postives = 172/214 (80.37%), Query Frame = 1


Query: 63  MAFARCLLPLPLETLKHPTSSIF----ASSSSTQCSFTVAFNSASRRRGDFNLPISTLCC 122
           MAF  C + +P ET +HP +SI     +SSSS +  F++AF+SAS      N    +   
Sbjct: 1   MAFVHCPVTVPFETSRHPKTSILESSLSSSSSHESLFSLAFSSASHWSRARNRSRFSKLS 60

Query: 123 KTGHRVKAKPHDSEATVVAGSFTEFKHLLLPITDRNPFLSEGTRQAIATTAALAKNNGAD 182
              ++VKA+P ++  ++ A +FT FKHLLLPITDRNP+LSEGTRQA+AT AA+AK  GA+
Sbjct: 61  PLEYKVKAQPQEANLSL-ADAFTHFKHLLLPITDRNPYLSEGTRQAVATAAAMAKKYGAE 120

Query: 183 ITVILIDEKQKESFPEHENQLSSIRWHLSEGGFQEYKLLERLGDGSKPTAIIGEVADDLN 242
           ITV++IDEKQK+S PEHE QLSSIRWHLSEGGFQE+KLLERLG+G+KPTAIIGEVADDLN
Sbjct: 121 ITVVVIDEKQKDSLPEHETQLSSIRWHLSEGGFQEFKLLERLGEGNKPTAIIGEVADDLN 180

Query: 243 LDLVVLSMEAVHSKHVDANLLAEFIPCPVMLLPL 273
           LDLV++SMEAVHSKHVDANLLAEFIPCPV+LLPL
Sbjct: 181 LDLVIISMEAVHSKHVDANLLAEFIPCPVILLPL 213

The following BLAST results are available for this feature:

BLAST of CmoCh06G001230 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh06G001230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L108_CUCSA	1.1e-93	83.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002600 PE=4 SV=1	[more]
A0A0D2QDV9_GOSRA	1.1e-71	66.82	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G006700 PE=4 SV=1	[more]
A0A067JMB9_JATCU	8.2e-70	64.81	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25356 PE=4 SV=1	[more]
A0A0B0PN47_GOSAR	1.4e-69	65.28	Universal stress protein OS=Gossypium arboreum GN=F383_07827 PE=4 SV=1	[more]
B9SYR8_RICCO	4.1e-69	66.67	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0361210 PE=4 SV=1	[more]

BLAST of CmoCh06G001230 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G66090.1	3.5e-56	68.18	unknown protein	[more]

BLAST of CmoCh06G001230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456841\|ref\|XP_004146157.1\|	1.5e-93	83.81	PREDICTED: uncharacterized protein LOC101219661 [Cucumis sativus]	[more]
gi\|659095322\|ref\|XP_008448520.1\|	1.3e-92	84.29	PREDICTED: uncharacterized protein LOC103490671 [Cucumis melo]	[more]
gi\|823138888\|ref\|XP_012469284.1\|	1.6e-71	66.82	PREDICTED: uncharacterized protein LOC105787442 [Gossypium raimondii]	[more]
gi\|802753361\|ref\|XP_012088474.1\|	1.2e-69	64.81	PREDICTED: uncharacterized protein LOC105647093 [Jatropha curcas]	[more]
gi\|1009144329\|ref\|XP_015889739.1\|	1.2e-69	65.89	PREDICTED: uncharacterized protein LOC107424443 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004190	aspartic-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh06G001230.1	CmoCh06G001230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 142..245 score: 1.
None	No IPR available	PANTHER	PTHR36081	FAMILY NOT NAMED	coord: 69..272 score: 2.7
None	No IPR available	unknown	SSF52402	Adenine nucleotide alpha hydrolases-like	coord: 157..271 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh06G001230	Cucsa.322830	Cucumber (Gy14) v1	cgycmoB0894
CmoCh06G001230	CmaCh06G001300	Cucurbita maxima (Rimu)	cmacmoB829
CmoCh06G001230	Cla008918	Watermelon (97103) v1	cmowmB775
CmoCh06G001230	Csa3G002600	Cucumber (Chinese Long) v2	cmocuB817
CmoCh06G001230	MELO3C013747	Melon (DHL92) v3.5.1	cmomeB757
CmoCh06G001230	ClCG10G000510	Watermelon (Charleston Gray)	cmowcgB731
CmoCh06G001230	CSPI03G00550	Wild cucumber (PI 183967)	cmocpiB825
CmoCh06G001230	Lsi07G010830	Bottle gourd (USVL1VR-Ls)	cmolsiB767
CmoCh06G001230	Cp4.1LG08g13000	Cucurbita pepo (Zucchini)	cmocpeB797
CmoCh06G001230	MELO3C013747.2	Melon (DHL92) v3.6.1	cmomedB862
CmoCh06G001230	CsaV3_3G000580	Cucumber (Chinese Long) v3	cmocucB0963
CmoCh06G001230	Cla97C10G185070	Watermelon (97103) v2	cmowmbB820
CmoCh06G001230	Bhi11G000250	Wax gourd	cmowgoB0987
CmoCh06G001230	Carg01201	Silver-seed gourd	carcmoB0227

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh06G001230	Silver-seed gourd	carcmoB0583
CmoCh06G001230	Cucurbita moschata (Rifu)	cmocmoB292
CmoCh06G001230	Cucurbita maxima (Rimu)	cmacmoB342
CmoCh06G001230	Cucurbita pepo (Zucchini)	cmocpeB769
CmoCh06G001230	Cucumber (Gy14) v2	cgybcmoB411