Csa3G002550 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G002550
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionAconitate hydratase 1; contains IPR015937 (Aconitase/isopropylmalate dehydratase)
LocationChr3 : 354655 .. 355549 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTACAATATAGACAAAAAGGAAAAAGTAAGTCTAAATTTGGATATGTTGCAGAGAGGTTAACATTTTCAATTAGAGTGCTTCTGGAATCGGCAATACACAACTGTGACGAATTTCAGGTGAAGTTTAAGGATGTTGAGAAGATTCTTGATTGGGAAAAGACTTGTCCCAGACAGGTTGAAATCCCATTTAAGCCTTGCCAGAGTCCTGCTTCAGGTGTATTAAAAGTGTAGCCAATAGTTTAATTGAGGTTGTAAGTTTGTGAAGTTACGATTAATTTGAATTGATTGATGGTGATCAAGATTTCACTGGACTGCCTGCTGTCATTGATCTTGCTTGCATGAAAGATGCAGTCAACAACATTGGTGGCAACTCCAACAAGGTGATTCCATTGGTGGGTGAAAAACTTACCTCCAAACTTCGAAGTCAGAAGTTTGGATCTTCTTCCAAAAACAAACCATCTGTGAATGTATCACATTTATGTCTAAAAAGCAAAAGAAAAATGTGCTATGCGTATTTCAAGTAAGTGTGTAATCAGATAATGAATAAAGGGGTAGAAAGAAAGATTAGTAAAATAAAGTGGGTAGGAAGAAAAATAGTACCACTTAAGTACTTTCTGGTTTTTTTAGAAGATGTGTTTTTAAGTTATAGTTCCAACACAAAGACGAGTAGTAGAACTGTTTTAATCCTTTAAGGGTACGTTGAAACATATCCAAACTAAATTTAAAGGCTGATTTATATATGTAAACTAGTCCTTGGATAATGCAGATTCCTGTAGATCTTGTGATTGACCATTCAGTAGAGGTTGACATGGCAAGATCAGAAAAGGCTGTGGAGGCCAATATGGAGCTTGATTTCCATAGAAATAAAGAAAGATTTGCTTTTCTCAAATGA

mRNA sequence

ATGGTACAATATAGACAAAAAGGAAAAAGTAAGTCTAAATTTGGATATGTTGCAGAGAGGTTAACATTTTCAATTAGAGTGCTTCTGGAATCGGCAATACACAACTGTGACGAATTTCAGGTGAAGTTTAAGGATGTTGAGAAGATTCTTGATTGGGAAAAGACTTGTCCCAGACAGGTTGAAATCCCATTTAAGCCTTGCCAGAGTCCTGCTTCAGATTTCACTGGACTGCCTGCTGTCATTGATCTTGCTTGCATGAAAGATGCAGTCAACAACATTGGTGGCAACTCCAACAAGGTGATTCCATTGGTGGGTGAAAAACTTACCTCCAAACTTCGAAGTCAGAAGTTTGGATCTTCTTCCAAAAACAAACCATCTGTGAATATTCCTGTAGATCTTGTGATTGACCATTCAGTAGAGGTTGACATGGCAAGATCAGAAAAGGCTGTGGAGGCCAATATGGAGCTTGATTTCCATAGAAATAAAGAAAGATTTGCTTTTCTCAAATGA

Coding sequence (CDS)

ATGGTACAATATAGACAAAAAGGAAAAAGTAAGTCTAAATTTGGATATGTTGCAGAGAGGTTAACATTTTCAATTAGAGTGCTTCTGGAATCGGCAATACACAACTGTGACGAATTTCAGGTGAAGTTTAAGGATGTTGAGAAGATTCTTGATTGGGAAAAGACTTGTCCCAGACAGGTTGAAATCCCATTTAAGCCTTGCCAGAGTCCTGCTTCAGATTTCACTGGACTGCCTGCTGTCATTGATCTTGCTTGCATGAAAGATGCAGTCAACAACATTGGTGGCAACTCCAACAAGGTGATTCCATTGGTGGGTGAAAAACTTACCTCCAAACTTCGAAGTCAGAAGTTTGGATCTTCTTCCAAAAACAAACCATCTGTGAATATTCCTGTAGATCTTGTGATTGACCATTCAGTAGAGGTTGACATGGCAAGATCAGAAAAGGCTGTGGAGGCCAATATGGAGCTTGATTTCCATAGAAATAAAGAAAGATTTGCTTTTCTCAAATGA

Protein sequence

MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK*
Homology
[Close]
BLAST of Csa3G002550 vs. Swiss-Prot
Match: ACO1_ARATH (Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2)

HSP 1 Score: 189.5 bits (480), Expect = 3.0e-47
Identity = 96/151 (63.58%), Postives = 111/151 (73.51%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. Swiss-Prot
Match: ACO2M_ARATH (Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-44
Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCD FQV  +DVEKI+DWEKT P+QVEIPFKP +    DFTG+P
Sbjct: 129 DKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSPKQVEIPFKPARVLLQDFTGVP 188

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+N +G +SNK+ PLV                         PVDLVIDHS
Sbjct: 189 AVVDLACMRDAMNKLGSDSNKINPLV-------------------------PVDLVIDHS 248

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 249 VQVDVARSENAVQANMELEFQRNKERFAFLK 254

[Close]
BLAST of Csa3G002550 vs. Swiss-Prot
Match: ACOC_CUCMA (Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-44
Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           +RL +SIR+LLESAI NCD FQVK +DVEKI+DWE + P+QVEIPFKP +    DFTG+P
Sbjct: 37  DRLPYSIRILLESAIRNCDNFQVKKEDVEKIIDWENSSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+N +G +SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNKLGSDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. Swiss-Prot
Match: ACOC_ORYSJ (Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os08g0191100 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-38
Identity = 81/151 (53.64%), Postives = 99/151 (65.56%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCD FQV   DVEKI+DWE T P+  EIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDNFQVNQNDVEKIIDWENTSPKLAEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLA M+DA+  +G ++NK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLAAMRDAMAKLGSDANKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARS  AV++NMEL+F RN ERF FLK
Sbjct: 157 VQVDVARSPNAVQSNMELEFKRNNERFGFLK 162

[Close]
BLAST of Csa3G002550 vs. Swiss-Prot
Match: ACO3M_ARATH (Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=2 SV=3)

HSP 1 Score: 154.1 bits (388), Expect = 1.4e-36
Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L FS+R+LLESAI NCD +QV   DVEKILDWE T  +QVEI FKP +    DFTG+P
Sbjct: 134 DKLPFSVRILLESAIRNCDNYQVTKDDVEKILDWENTSTKQVEIAFKPARVILQDFTGVP 193

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
            ++DLA M+DAV N+G + +K+ PLV                         PVDLV+DHS
Sbjct: 194 VLVDLASMRDAVKNLGSDPSKINPLV-------------------------PVDLVVDHS 253

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           ++VD ARSE A + N+EL+F RNKERF FLK
Sbjct: 254 IQVDFARSEDAAQKNLELEFKRNKERFTFLK 259

[Close]
BLAST of Csa3G002550 vs. TrEMBL
Match: A0A0A0L103_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002550 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 2.0e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV 60
           MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV
Sbjct: 1   MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV 60

Query: 61  EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS 120
           EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS
Sbjct: 61  EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS 120

Query: 121 SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK
Sbjct: 121 SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK 169

[Close]
BLAST of Csa3G002550 vs. TrEMBL
Match: V4ME71_EUTSA (Aconitate hydratase OS=Eutrema salsugineum GN=EUTSA_v10024358mg PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. TrEMBL
Match: R0FAU4_9BRAS (Aconitate hydratase OS=Capsella rubella GN=CARUB_v10007484mg PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. TrEMBL
Match: M4D585_BRARP (Aconitate hydratase OS=Brassica rapa subsp. pekinensis PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. TrEMBL
Match: V4MAY0_EUTSA (Aconitate hydratase OS=Eutrema salsugineum GN=EUTSA_v10024358mg PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.4e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. TAIR10
Match: AT4G35830.1 (AT4G35830.1 aconitase 1)

HSP 1 Score: 189.5 bits (480), Expect = 1.7e-48
Identity = 96/151 (63.58%), Postives = 111/151 (73.51%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. TAIR10
Match: AT2G05710.1 (AT2G05710.1 aconitase 3)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-45
Identity = 91/151 (60.26%), Postives = 108/151 (71.52%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCD FQV  +DVEKI+DWEKT P+QVEIPFKP +    DFTG+P
Sbjct: 129 DKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWEKTSPKQVEIPFKPARVLLQDFTGVP 188

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+N +G +SNK+ PLV                         PVDLVIDHS
Sbjct: 189 AVVDLACMRDAMNKLGSDSNKINPLV-------------------------PVDLVIDHS 248

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 249 VQVDVARSENAVQANMELEFQRNKERFAFLK 254

[Close]
BLAST of Csa3G002550 vs. TAIR10
Match: AT4G26970.1 (AT4G26970.1 aconitase 2)

HSP 1 Score: 154.1 bits (388), Expect = 7.9e-38
Identity = 78/151 (51.66%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L FS+R+LLESAI NCD +QV   DVEKILDWE T  +QVEI FKP +    DFTG+P
Sbjct: 134 DKLPFSVRILLESAIRNCDNYQVTKDDVEKILDWENTSTKQVEIAFKPARVILQDFTGVP 193

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
            ++DLA M+DAV N+G + +K+ PLV                         PVDLV+DHS
Sbjct: 194 VLVDLASMRDAVKNLGSDPSKINPLV-------------------------PVDLVVDHS 253

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           ++VD ARSE A + N+EL+F RNKERF FLK
Sbjct: 254 IQVDFARSEDAAQKNLELEFKRNKERFTFLK 259

[Close]
BLAST of Csa3G002550 vs. NCBI nr
Match: gi|700200502|gb|KGN55635.1| (hypothetical protein Csa_3G002550 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 2.9e-90
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1 

Query: 1   MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV 60
           MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV
Sbjct: 1   MVQYRQKGKSKSKFGYVAERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQV 60

Query: 61  EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS 120
           EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS
Sbjct: 61  EIPFKPCQSPASDFTGLPAVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSS 120

Query: 121 SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK
Sbjct: 121 SKNKPSVNIPVDLVIDHSVEVDMARSEKAVEANMELDFHRNKERFAFLK 169

[Close]
BLAST of Csa3G002550 vs. NCBI nr
Match: gi|1009174474|ref|XP_015868363.1| (PREDICTED: aconitate hydratase 1 [Ziziphus jujuba])

HSP 1 Score: 192.2 bits (487), Expect = 7.4e-46
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           +RL +SIR+LLESAI NCDEFQVK KDVEKI+DWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DRLPYSIRILLESAIRNCDEFQVKIKDVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+FHRNKERF FLK
Sbjct: 157 VQVDVARSENAVQANMELEFHRNKERFGFLK 162

[Close]
BLAST of Csa3G002550 vs. NCBI nr
Match: gi|1009144375|ref|XP_015889766.1| (PREDICTED: aconitate hydratase 1 [Ziziphus jujuba])

HSP 1 Score: 192.2 bits (487), Expect = 7.4e-46
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           +RL +SIR+LLESAI NCDEFQVK KDVEKI+DWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DRLPYSIRILLESAIRNCDEFQVKIKDVEKIIDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+FHRNKERF FLK
Sbjct: 157 VQVDVARSENAVQANMELEFHRNKERFGFLK 162

[Close]
BLAST of Csa3G002550 vs. NCBI nr
Match: gi|15233349|ref|NP_195308.1| (aconitate hydratase 1 [Arabidopsis thaliana])

HSP 1 Score: 189.5 bits (480), Expect = 4.8e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

[Close]
BLAST of Csa3G002550 vs. NCBI nr
Match: gi|685256630|ref|XP_009150005.1| (PREDICTED: aconitate hydratase 1 [Brassica rapa])

HSP 1 Score: 189.5 bits (480), Expect = 4.8e-45
Identity = 96/151 (63.58%), Postives = 113/151 (74.83%), Query Frame = 1 

Query: 19  ERLTFSIRVLLESAIHNCDEFQVKFKDVEKILDWEKTCPRQVEIPFKPCQSPASDFTGLP 78
           ++L +SIR+LLESAI NCDEFQVK KDVEKILDWE T P+QVEIPFKP +    DFTG+P
Sbjct: 37  DKLPYSIRILLESAIRNCDEFQVKSKDVEKILDWENTSPKQVEIPFKPARVLLQDFTGVP 96

Query: 79  AVIDLACMKDAVNNIGGNSNKVIPLVGEKLTSKLRSQKFGSSSKNKPSVNIPVDLVIDHS 138
           AV+DLACM+DA+NN+GG+SNK+ PLV                         PVDLVIDHS
Sbjct: 97  AVVDLACMRDAMNNLGGDSNKINPLV-------------------------PVDLVIDHS 156

Query: 139 VEVDMARSEKAVEANMELDFHRNKERFAFLK 170
           V+VD+ARSE AV+ANMEL+F RNKERFAFLK
Sbjct: 157 VQVDVARSENAVQANMELEFQRNKERFAFLK 162

The following BLAST results are available for this feature:
BLAST of Csa3G002550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACO1_ARATH3.0e-4763.58Aconitate hydratase 1 OS=Arabidopsis thaliana GN=ACO1 PE=1 SV=2[more]
ACO2M_ARATH2.4e-4460.26Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana GN=ACO2 PE=1 SV=2[more]
ACOC_CUCMA2.4e-4460.26Aconitate hydratase, cytoplasmic OS=Cucurbita maxima PE=2 SV=1[more]
ACOC_ORYSJ5.7e-3853.64Putative aconitate hydratase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os0... [more]
ACO3M_ARATH1.4e-3651.66Aconitate hydratase 3, mitochondrial OS=Arabidopsis thaliana GN=ACO3 PE=2 SV=3[more]
BLAST of Csa3G002550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L103_CUCSA2.0e-90100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002550 PE=4 SV=1[more]
V4ME71_EUTSA3.4e-4563.58Aconitate hydratase OS=Eutrema salsugineum GN=EUTSA_v10024358mg PE=3 SV=1[more]
R0FAU4_9BRAS3.4e-4563.58Aconitate hydratase OS=Capsella rubella GN=CARUB_v10007484mg PE=3 SV=1[more]
M4D585_BRARP3.4e-4563.58Aconitate hydratase OS=Brassica rapa subsp. pekinensis PE=3 SV=1[more]
V4MAY0_EUTSA3.4e-4563.58Aconitate hydratase OS=Eutrema salsugineum GN=EUTSA_v10024358mg PE=3 SV=1[more]
BLAST of Csa3G002550 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35830.11.7e-4863.58 aconitase 1[more]
AT2G05710.11.3e-4560.26 aconitase 3[more]
AT4G26970.17.9e-3851.66 aconitase 2[more]
BLAST of Csa3G002550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200502|gb|KGN55635.1|2.9e-90100.00hypothetical protein Csa_3G002550 [Cucumis sativus][more]
gi|1009174474|ref|XP_015868363.1|7.4e-4663.58PREDICTED: aconitate hydratase 1 [Ziziphus jujuba][more]
gi|1009144375|ref|XP_015889766.1|7.4e-4663.58PREDICTED: aconitate hydratase 1 [Ziziphus jujuba][more]
gi|15233349|ref|NP_195308.1|4.8e-4563.58aconitate hydratase 1 [Arabidopsis thaliana][more]
gi|685256630|ref|XP_009150005.1|4.8e-4563.58PREDICTED: aconitate hydratase 1 [Brassica rapa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001030Acoase/IPM_deHydtase_lsu_aba
IPR015931Acnase/IPM_dHydase_lsu_aba_1/3
IPR015937Aconitase/isopropylmalate dehydratase
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0072350 tricarboxylic acid metabolic process
biological_process GO:0055072 iron ion homeostasis
biological_process GO:0006833 water transport
biological_process GO:0007033 vacuole organization
biological_process GO:0009266 response to temperature stimulus
biological_process GO:0000302 response to reactive oxygen species
biological_process GO:0010039 response to iron ion
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0015979 photosynthesis
biological_process GO:0006102 isocitrate metabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0006972 hyperosmotic response
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0008152 metabolic process
biological_process GO:0007030 Golgi organization
cellular_component GO:0005829 cytosol
cellular_component GO:0005773 vacuole
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005886 plasma membrane
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0048046 apoplast
cellular_component GO:0044444 cytoplasmic part
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016829 lyase activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003994 aconitate hydratase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0048027 mRNA 5'-UTR binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G002550.1Csa3G002550.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001030Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domainunknownSSF53732Aconitase iron-sulfur domaincoord: 16..168
score: 5.76
IPR015931Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3GENE3DG3DSA:3.30.499.10coord: 125..169
score: 2.9E-24coord: 16..88
score: 2.9
IPR015937Aconitase/isopropylmalate dehydratasePANTHERPTHR11670ACONITASEcoord: 130..169
score: 9.2E-63coord: 19..104
score: 9.2
NoneNo IPR availablePANTHERPTHR11670:SF40ACONITATE HYDRATASE 1coord: 130..169
score: 9.2E-63coord: 19..104
score: 9.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G002550Lsi07G010800Bottle gourd (USVL1VR-Ls)culsiB228
Csa3G002550MELO3C032251.2Melon (DHL92) v3.6.1cumedB224
Csa3G002550Bhi11G000246Wax gourdcuwgoB226
Csa3G002550CSPI03G00510Wild cucumber (PI 183967)cpicuB120
Csa3G002550Cp4.1LG19g08790Cucurbita pepo (Zucchini)cpecuB484
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G002550Cucumber (Chinese Long) v2cucuB119
Csa3G002550Cucumber (Gy14) v1cgycuB024
Csa3G002550Cucumber (Gy14) v1cgycuB458
Csa3G002550Cucurbita maxima (Rimu)cmacuB326
Csa3G002550Cucurbita maxima (Rimu)cmacuB658
Csa3G002550Cucurbita maxima (Rimu)cmacuB827
Csa3G002550Cucurbita maxima (Rimu)cmacuB854
Csa3G002550Cucurbita moschata (Rifu)cmocuB316
Csa3G002550Cucurbita moschata (Rifu)cmocuB646
Csa3G002550Cucurbita moschata (Rifu)cmocuB817
Csa3G002550Cucurbita moschata (Rifu)cmocuB842
Csa3G002550Melon (DHL92) v3.5.1cumeB243
Csa3G002550Melon (DHL92) v3.5.1cumeB262
Csa3G002550Watermelon (Charleston Gray)cuwcgB189
Csa3G002550Watermelon (Charleston Gray)cuwcgB209
Csa3G002550Watermelon (97103) v1cuwmB200
Csa3G002550Watermelon (97103) v1cuwmB261
Csa3G002550Cucurbita pepo (Zucchini)cpecuB069
Csa3G002550Cucurbita pepo (Zucchini)cpecuB212
Csa3G002550Cucurbita pepo (Zucchini)cpecuB555
Csa3G002550Cucurbita pepo (Zucchini)cpecuB851
Csa3G002550Bottle gourd (USVL1VR-Ls)culsiB165
Csa3G002550Cucumber (Gy14) v2cgybcuB109
Csa3G002550Cucumber (Gy14) v2cgybcuB266
Csa3G002550Melon (DHL92) v3.6.1cumedB252
Csa3G002550Silver-seed gourdcarcuB0173
Csa3G002550Silver-seed gourdcarcuB0436
Csa3G002550Silver-seed gourdcarcuB0462
Csa3G002550Silver-seed gourdcarcuB0662
Csa3G002550Watermelon (97103) v2cuwmbB178
Csa3G002550Watermelon (97103) v2cuwmbB181
Csa3G002550Wax gourdcuwgoB326