Csa3G002520 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G002520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein-methionine-s-oxide reductase; contains IPR011057 (Mss4-like)
LocationChr3 : 349401 .. 350243 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGCGAAGAAGAAGAGCTGAGATTTGGAGCTCAAAAGTACTTCACTTTGCAATTCGCATCGTTGACTACGATTTTGCATCACAGAACCTTCCTTCAATCTTCGTATCAAACTTGGGGCATACGTTTGAACAATCCCACTTCTTGTTCTCAGAGATTCAAATCCAGTTACCCAATCTCTCTCTCTCCACAAAGCTTTTGAAATTCTCTTCAACGATGGCTTCCATCTATTCCTGTACAGAATGCGGAACTAATCTCAATCTCAATTCCACTCATCTCTTCCCGCCTGATTTCTATTTCGAGGCCGGAAACAAGGGAACCCTTTCGTTTTCCTTCATCGACTCCACCAAGTTCCGTCTCGAGAAAGAGGACAAGCTCCGACCATTCTTCGAGACTCTCAACTATTGGGGAATCCAGCGTAAACGGACCAAGCTCAAGTGCAACTCATGTGGGCATCTTGTCGGCTATGTTTACGATGATGGCCCCCCTCTTACTGATAGTCCAGGTCAGTTCCACTTCGGACCTAGCCAAGTTATTCCCCGAGCTCCTAGGTACAGATTCAAGATCAAGGCTCTTCGGATTACCTCAGAGAGTTGAAATATTTTGACTATCGCACATTAGGGTTTGAAAGTTTAAGAATTGAGACTGTTTTTGCCATGGGGTTCGTGAATTCTGTCTATATTGTCAATACACACTACTGTACAAATATGTTGAACTTCAATAGAATGCTTGTGAAAGGTTCTGTTCATTTTATTGCTTTTGATACAGGAATAAAACTCGTTTTGTGCTTTGCTATTATCGCAATCTGTTCATTCTTTATCACTATGTTCTTTGCATCTTGCATTC

mRNA sequence

ATGGCTTCCATCTATTCCTGTACAGAATGCGGAACTAATCTCAATCTCAATTCCACTCATCTCTTCCCGCCTGATTTCTATTTCGAGGCCGGAAACAAGGGAACCCTTTCGTTTTCCTTCATCGACTCCACCAAGTTCCGTCTCGAGAAAGAGGACAAGCTCCGACCATTCTTCGAGACTCTCAACTATTGGGGAATCCAGCGTAAACGGACCAAGCTCAAGTGCAACTCATGTGGGCATCTTGTCGGCTATGTTTACGATGATGGCCCCCCTCTTACTGATAGTCCAGGTCAGTTCCACTTCGGACCTAGCCAAGTTATTCCCCGAGCTCCTAGGTACAGATTCAAGATCAAGGCTCTTCGGATTACCTCAGAGAGTTGA

Coding sequence (CDS)

ATGGCTTCCATCTATTCCTGTACAGAATGCGGAACTAATCTCAATCTCAATTCCACTCATCTCTTCCCGCCTGATTTCTATTTCGAGGCCGGAAACAAGGGAACCCTTTCGTTTTCCTTCATCGACTCCACCAAGTTCCGTCTCGAGAAAGAGGACAAGCTCCGACCATTCTTCGAGACTCTCAACTATTGGGGAATCCAGCGTAAACGGACCAAGCTCAAGTGCAACTCATGTGGGCATCTTGTCGGCTATGTTTACGATGATGGCCCCCCTCTTACTGATAGTCCAGGTCAGTTCCACTTCGGACCTAGCCAAGTTATTCCCCGAGCTCCTAGGTACAGATTCAAGATCAAGGCTCTTCGGATTACCTCAGAGAGTTGA

Protein sequence

MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFETLNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKALRITSES*
Homology
[Close]
BLAST of Csa3G002520 vs. Swiss-Prot
Match: Y4833_ARATH (Uncharacterized protein At4g08330, chloroplastic OS=Arabidopsis thaliana GN=At4g08330 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.9e-07
Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 1 

Query: 5   YSCTECGTNLNLNSTHLFPPDF---YFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFETL 64
           YSC  CG  LNL+ST+         Y ++   G +SF  ID  +F    E +  P F   
Sbjct: 38  YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 97

Query: 65  NYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKALR 124
           + WG+ R RTKL C  C + +G    +  P      Q     S  I    +Y  +I++L+
Sbjct: 98  S-WGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQ 157

[Close]
BLAST of Csa3G002520 vs. TrEMBL
Match: A0A0A0L4W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002520 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-69
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL
Sbjct: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120

Query: 121 RITSES 127
           RITSES
Sbjct: 121 RITSES 126

[Close]
BLAST of Csa3G002520 vs. TrEMBL
Match: A0A061DFL4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000130 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-60
Identity = 108/126 (85.71%), Postives = 120/126 (95.24%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIY CTECGTNLNL++THLFPPDFYFEAGNKGTLSF+ ID+TKF+LEKEDK+RPFFET
Sbjct: 1   MASIYCCTECGTNLNLSTTHLFPPDFYFEAGNKGTLSFALIDTTKFKLEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           ++YWGIQRKRTK+KCNSCG LVGYVYDDGPPLT+  GQ+HFGPSQVIPRAPRYRFK KAL
Sbjct: 61  VDYWGIQRKRTKIKCNSCGKLVGYVYDDGPPLTNGTGQYHFGPSQVIPRAPRYRFKTKAL 120

Query: 121 RITSES 127
           RITSE+
Sbjct: 121 RITSET 126

[Close]
BLAST of Csa3G002520 vs. TrEMBL
Match: F6HAH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0264g00060 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.0e-59
Identity = 104/126 (82.54%), Postives = 117/126 (92.86%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MAS+YSC ECGTNLNLN+THLFP DFYF+AGNKGTLSF+ +D+TKFR EKEDK+RPFFET
Sbjct: 1   MASVYSCRECGTNLNLNATHLFPSDFYFDAGNKGTLSFACVDATKFRFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           L+YWGIQRKRTK+KCNSCG LVGY+YDDGPPLTDSPGQ HFGPSQVIPRAPRYRFK K L
Sbjct: 61  LDYWGIQRKRTKIKCNSCGRLVGYIYDDGPPLTDSPGQLHFGPSQVIPRAPRYRFKTKTL 120

Query: 121 RITSES 127
           +I S++
Sbjct: 121 QIASQT 126

[Close]
BLAST of Csa3G002520 vs. TrEMBL
Match: A0A0D2REI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G005800 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-57
Identity = 105/126 (83.33%), Postives = 112/126 (88.89%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIY C ECGTNLNL ST+LFPPDFYFEAGNKGTLSF+ ID TKF  EKEDK RPFFET
Sbjct: 1   MASIYCCKECGTNLNLRSTYLFPPDFYFEAGNKGTLSFATIDDTKFNFEKEDKFRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           L+YWGIQR RTK+KC SCG LVGY+YDDGPPLTDSPGQFH GPSQVIPR PRYRFKIKAL
Sbjct: 61  LDYWGIQRNRTKMKCKSCGKLVGYIYDDGPPLTDSPGQFHMGPSQVIPRCPRYRFKIKAL 120

Query: 121 RITSES 127
            I+SE+
Sbjct: 121 TISSET 126

[Close]
BLAST of Csa3G002520 vs. TrEMBL
Match: A0A067JVC6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25338 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.3e-57
Identity = 106/126 (84.13%), Postives = 116/126 (92.06%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIY+C ECGTNLNL++  L+PPDFYFEAGNKGTLSFS IDSTKF+ EKEDK+RPFFET
Sbjct: 1   MASIYTCIECGTNLNLSTACLYPPDFYFEAGNKGTLSFSSIDSTKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           LNYWGIQRKRTK+ CNSCG LVGYVYDDGPPLT+S GQFH GPSQVIPRAPR+RFK KAL
Sbjct: 61  LNYWGIQRKRTKIICNSCGRLVGYVYDDGPPLTNSTGQFHMGPSQVIPRAPRFRFKTKAL 120

Query: 121 RITSES 127
           RITSE+
Sbjct: 121 RITSET 126

[Close]
BLAST of Csa3G002520 vs. TAIR10
Match: AT2G17705.1 (AT2G17705.1 unknown protein)

HSP 1 Score: 210.3 bits (534), Expect = 6.9e-55
Identity = 91/125 (72.80%), Postives = 108/125 (86.40%), Query Frame = 1 

Query: 2   ASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFETL 61
           ++IY+C ECG++LNLN   LFPPDFYFEAGNKGTLSF+ +D+ KFR EKEDK+ PFFETL
Sbjct: 3   STIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETL 62

Query: 62  NYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKALR 121
           NYWGIQRKRTK+KC SC HL+GY+YDDGPPLT   GQ+ FGPSQVIPRAPRYRFK KA++
Sbjct: 63  NYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIGQYGFGPSQVIPRAPRYRFKTKAVQ 122

Query: 122 ITSES 127
           ++S++
Sbjct: 123 VSSQT 127

[Close]
BLAST of Csa3G002520 vs. TAIR10
Match: AT4G08330.1 (AT4G08330.1 unknown protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.2e-08
Identity = 38/123 (30.89%), Postives = 54/123 (43.90%), Query Frame = 1 

Query: 5   YSCTECGTNLNLNSTHLFPPDF---YFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFETL 64
           YSC  CG  LNL+ST+         Y ++   G +SF  ID  +F    E +  P F   
Sbjct: 38  YSCGSCGYELNLSSTNRITSTIGSKYGKSMKSGIISFFNIDEGRFSQVDEFQCMPHFSRY 97

Query: 65  NYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKALR 124
           + WG+ R RTKL C  C + +G    +  P      Q     S  I    +Y  +I++L+
Sbjct: 98  S-WGLFRHRTKLLCRKCNNYIGNASQEKAPEYALVTQNSDPTSPRIGSVTKYDIRIRSLQ 157

[Close]
BLAST of Csa3G002520 vs. NCBI nr
Match: gi|449456857|ref|XP_004146165.1| (PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 2.7e-69
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL
Sbjct: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120

Query: 121 RITSES 127
           RITSES
Sbjct: 121 RITSES 126

[Close]
BLAST of Csa3G002520 vs. NCBI nr
Match: gi|659095313|ref|XP_008448515.1| (PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 3.3e-67
Identity = 121/126 (96.03%), Postives = 125/126 (99.21%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIYSC+ECGTNLNLNS+HLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCSECGTNLNLNSSHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           LNYWGIQRKRTKLKC SCGHLVGY+YDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL
Sbjct: 61  LNYWGIQRKRTKLKCTSCGHLVGYIYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120

Query: 121 RITSES 127
           RITSE+
Sbjct: 121 RITSET 126

[Close]
BLAST of Csa3G002520 vs. NCBI nr
Match: gi|590702299|ref|XP_007046590.1| (Uncharacterized protein TCM_000130 [Theobroma cacao])

HSP 1 Score: 240.0 bits (611), Expect = 2.3e-60
Identity = 108/126 (85.71%), Postives = 120/126 (95.24%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIY CTECGTNLNL++THLFPPDFYFEAGNKGTLSF+ ID+TKF+LEKEDK+RPFFET
Sbjct: 1   MASIYCCTECGTNLNLSTTHLFPPDFYFEAGNKGTLSFALIDTTKFKLEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           ++YWGIQRKRTK+KCNSCG LVGYVYDDGPPLT+  GQ+HFGPSQVIPRAPRYRFK KAL
Sbjct: 61  VDYWGIQRKRTKIKCNSCGKLVGYVYDDGPPLTNGTGQYHFGPSQVIPRAPRYRFKTKAL 120

Query: 121 RITSES 127
           RITSE+
Sbjct: 121 RITSET 126

[Close]
BLAST of Csa3G002520 vs. NCBI nr
Match: gi|502161486|ref|XP_004512181.1| (PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cicer arietinum])

HSP 1 Score: 239.6 bits (610), Expect = 3.0e-60
Identity = 107/124 (86.29%), Postives = 117/124 (94.35%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MASIYSC ECGTNLNLNSTH +PPDFYFEAGNK ++SFS +DSTKF+ EKEDK+RPFFET
Sbjct: 1   MASIYSCVECGTNLNLNSTHAYPPDFYFEAGNKNSISFSTVDSTKFKFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           LNYWGIQRKRTK+KCNSCG+LVGY+YDDGPPLTDSPGQFH GPSQVIPRAPR+RFK KAL
Sbjct: 61  LNYWGIQRKRTKIKCNSCGNLVGYIYDDGPPLTDSPGQFHMGPSQVIPRAPRFRFKSKAL 120

Query: 121 RITS 125
           RITS
Sbjct: 121 RITS 124

[Close]
BLAST of Csa3G002520 vs. NCBI nr
Match: gi|225431343|ref|XP_002278070.1| (PREDICTED: uncharacterized protein LOC100250649 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 4.4e-59
Identity = 104/126 (82.54%), Postives = 117/126 (92.86%), Query Frame = 1 

Query: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60
           MAS+YSC ECGTNLNLN+THLFP DFYF+AGNKGTLSF+ +D+TKFR EKEDK+RPFFET
Sbjct: 1   MASVYSCRECGTNLNLNATHLFPSDFYFDAGNKGTLSFACVDATKFRFEKEDKIRPFFET 60

Query: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPGQFHFGPSQVIPRAPRYRFKIKAL 120
           L+YWGIQRKRTK+KCNSCG LVGY+YDDGPPLTDSPGQ HFGPSQVIPRAPRYRFK K L
Sbjct: 61  LDYWGIQRKRTKIKCNSCGRLVGYIYDDGPPLTDSPGQLHFGPSQVIPRAPRYRFKTKTL 120

Query: 121 RITSES 127
           +I S++
Sbjct: 121 QIASQT 126

The following BLAST results are available for this feature:
BLAST of Csa3G002520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4833_ARATH3.9e-0730.89Uncharacterized protein At4g08330, chloroplastic OS=Arabidopsis thaliana GN=At4g... [more]
BLAST of Csa3G002520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4W0_CUCSA1.9e-69100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002520 PE=4 SV=1[more]
A0A061DFL4_THECC1.6e-6085.71Uncharacterized protein OS=Theobroma cacao GN=TCM_000130 PE=4 SV=1[more]
F6HAH4_VITVI3.0e-5982.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0264g00060 PE=4 SV=... [more]
A0A0D2REI8_GOSRA1.3e-5783.33Uncharacterized protein OS=Gossypium raimondii GN=B456_003G005800 PE=4 SV=1[more]
A0A067JVC6_JATCU1.3e-5784.13Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25338 PE=4 SV=1[more]
BLAST of Csa3G002520 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17705.16.9e-5572.80 unknown protein[more]
AT4G08330.12.2e-0830.89 unknown protein[more]
BLAST of Csa3G002520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456857|ref|XP_004146165.1|2.7e-69100.00PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis sativus][more]
gi|659095313|ref|XP_008448515.1|3.3e-6796.03PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo][more]
gi|590702299|ref|XP_007046590.1|2.3e-6085.71Uncharacterized protein TCM_000130 [Theobroma cacao][more]
gi|502161486|ref|XP_004512181.1|3.0e-6086.29PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cicer arietinum][more]
gi|225431343|ref|XP_002278070.1|4.4e-5982.54PREDICTED: uncharacterized protein LOC100250649 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002579Met_Sox_Rdtase_MsrB
IPR011057Mss4-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0033743peptide-methionine (R)-S-oxide reductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU111084cucumber EST collection version 3.0transcribed_cluster
CU112143cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G002520.1Csa3G002520.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112143CU112143transcribed_cluster
CU111084CU111084transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsBGENE3DG3DSA:2.170.150.20coord: 3..92
score: 4.
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 4..92
score: 9.4
NoneNo IPR availablePANTHERPTHR33674FAMILY NOT NAMEDcoord: 1..125
score: 1.5
NoneNo IPR availablePANTHERPTHR33674:SF5SUBFAMILY NOT NAMEDcoord: 1..125
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G002520Cla008923Watermelon (97103) v1cuwmB200
Csa3G002520MELO3C013742.2Melon (DHL92) v3.6.1cumedB224
Csa3G002520Cla97C10G185000Watermelon (97103) v2cuwmbB181
Csa3G002520Bhi11G000244Wax gourdcuwgoB226
Csa3G002520CSPI03G00480Wild cucumber (PI 183967)cpicuB120
Csa3G002520CmaCh16G012540Cucurbita maxima (Rimu)cmacuB326
Csa3G002520CmoCh16G013040Cucurbita moschata (Rifu)cmocuB316
Csa3G002520Cp4.1LG14g10560Cucurbita pepo (Zucchini)cpecuB212
Csa3G002520CsGy3G000460Cucumber (Gy14) v2cgybcuB109
Csa3G002520Carg19455Silver-seed gourdcarcuB0462
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G002520Melon (DHL92) v3.6.1cumedB252
Csa3G002520Silver-seed gourdcarcuB0173
Csa3G002520Silver-seed gourdcarcuB0662
Csa3G002520Watermelon (97103) v2cuwmbB178
Csa3G002520Wax gourdcuwgoB326
Csa3G002520Cucumber (Chinese Long) v2cucuB119
Csa3G002520Cucumber (Gy14) v1cgycuB024
Csa3G002520Cucumber (Gy14) v1cgycuB458
Csa3G002520Cucurbita maxima (Rimu)cmacuB658
Csa3G002520Cucurbita maxima (Rimu)cmacuB827
Csa3G002520Cucurbita maxima (Rimu)cmacuB854
Csa3G002520Cucurbita moschata (Rifu)cmocuB646
Csa3G002520Cucurbita moschata (Rifu)cmocuB817
Csa3G002520Cucurbita moschata (Rifu)cmocuB842
Csa3G002520Melon (DHL92) v3.5.1cumeB243
Csa3G002520Melon (DHL92) v3.5.1cumeB262
Csa3G002520Watermelon (Charleston Gray)cuwcgB189
Csa3G002520Watermelon (Charleston Gray)cuwcgB209
Csa3G002520Watermelon (97103) v1cuwmB261
Csa3G002520Cucurbita pepo (Zucchini)cpecuB069
Csa3G002520Cucurbita pepo (Zucchini)cpecuB484
Csa3G002520Cucurbita pepo (Zucchini)cpecuB555
Csa3G002520Cucurbita pepo (Zucchini)cpecuB851
Csa3G002520Bottle gourd (USVL1VR-Ls)culsiB165
Csa3G002520Bottle gourd (USVL1VR-Ls)culsiB228
Csa3G002520Cucumber (Gy14) v2cgybcuB266