Cp4.1LG14g10560 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g10560
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMethionine-S-oxide reductase
LocationCp4.1LG14 : 8742587 .. 8747250 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTAGTAATCCTGTTATCAAATTTTTAAATCCTGTTATCAAATTTTTAAATCCTGTTACATACAGCCCAAAATCTCTGACGAATCCTCTGAATTTCTCGTCAACAATGGCTTCCATCTATTGTTGTGCAGAATGCGGAGCAAATCTGAATCTGAATTCCAGTCATCTCTTCCCGCCGGATTTCTATTTCGAGGCCGGAAACAAGGGCACGCTTTCGTTTTCCTTGATCGACTCCACCAAGTTCAGGCTCGAGAAAGAGGACAAGCTCCGGCCATTCTTTGAGACCGTCAACTATTGGGGAATCCAGCGGAAACGCACCAAGATCAAGTGCAACTCATGTGCGCGTCTCGTCGGCTATGTTTACGACGATGGGCCTCCTCTCACCGAGAGTCCTGGTCAGTACCACTTCGGACCTAGCCAGGTTATTCCCCGAGCTCCTAGATACAGATTCAAGATCAAGGAGCTTCGGATTTCCTCTGAGAGTTGAAATATATTGATTATCGCGCATTAGGGTTTGAGAAGTTCTATGAATTTGTGTCTGTTTTTTCAACTTTTATATAGATCATAGATGGTTGTTTCTGCCCTGGGATCTGTGAATATTGTTTGCATCATCAGTACACCTTACTGTACAAATAAGTTGGAACTTCAATCGAATGCTTGTGAAATATTCTCGTTTACTATTGCAGCAATCTGTTCATTCTTTATCTCTATGTTCATTCTTTTAGTAATCCAAAAAGCTTTGCTTAGGAAACATGTCTTTTATTCTCTCATCTTGTAGTTATCTCTAATCTCTGATAAAAAGAAGTCTGATTAGCATGGCTTAAGCAAGTAAAAGCAAGCTAAATGCATGTCATCCAGCCCAGTGGCTGCAGAAATAGTTGGACTAACTCCTAGTTTAAGCCCTGCTAGGCAAAAAGATAGCAATTCAAGTGGAAGGGGAGGGTTGTTCTTATATGTTCTGGACACTGGAAAGGGGAAGGCATTGACAGGGTTGTCACTTGTCTTCTTCAATTCCATCAACCCTTGGAATCCTTTGACATACACATGAGCTGGAATACAAAAGGAAATTTTCTTCATATCTTGGATGCTTATATCTCTATTGTAGAAACGTGGAGATCCTGATTGTTATCATGCACAATAAGAAGAGAAATGCCCTCCAGAAAGTATCTCCAACATTCGGATAATTTGACCATCTATGTTGGCCTTGTTAATGACCCAGTTTTGTGTGCTGAACTAATTTCTTGTCACATAGTGTAGAGTTCCTCCATGATCAAAATACTGAGTTGGTAATTTAGACCATCTAAACCTTATCGTGTCAGCTAAGAGCATAGGCAACCACCAAGGTGTTAAGGATATTTAGCTTTCCATTACGGTTTACCATAGGTACCATATTTGACCAGGCAAATATCTTGTATCCATTTATTGCTCTTTTCGTTTCCTTTGTGATTTATTTGATGATTATAGATAGAGAACTTCACCACCGTTTCGGTGTGATGGTTTTAGCAAATATCCTCACAGGGGAGGAGAGGCAAGATAATTGACCCTTGTCGAGAATGTACACAACCCTCTTAAGTTCCTGTTTCCGGATCGAATGGCCACTGCTACCATATCTGCTAATGTACAATATTAGCAATTCGATTGCTTACCTGAGCTAGAGAGGCCAAAGGGCACAAATGGGAACAACTAAACTTTTCAAAGCAATCATATCCAACAGTATTGAACCCCAGCTGATCTAAATACATCGGCAATCCACTTCAGAAATTCAATTCTTGACTGGAGAAATATAATCATTCGTACAACAAGGCAAACCAGAAAAAGACAGACAAACTCCCATTCAGAAGAATAATTGAATTAGAATAGTTCATTTTATGTCAAATTCTTTGATCCGATCTTTATTTCTCATTTAACAACAGGAGAGCATTTGGGGAGTTTGATAGTGAGCACCTCTGTTCAAAGTATTTGGTTACCACTCTTGAAACTGGAGCAAGACTGGTCTTTATCCAAGGCTTAACCTGTGCAGACGGCCAAATATCTCGGGTACGTTTGGGAATATGTTTAATTAAACGTTTCATTTTGGTTTCCATTGTCTTACTGAAATAAATTATTGATGCAGGCAACACAAGGAGGAAGAAACGAGGGAAAATTTTGCACACCTCGAAACCAAGCTCACAAGCTTTCTTAGCAACCAAAGCAGCTCCAAGCATTGTGCTAGGATTGGAGGTCCAGCTTAAGAAAAATCAGGTTCCTTCTTTTTCTCCCTTTATGATTAACTAGAAGGGCTAATGATTTTGAAGAGCCGACACTGAAAACATAGATCTCTACATATAATAATATAAGGATTAACATAGATCTCTACATGTTTTCAAACCTTCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAACCTTGAGGGGAAATTTGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTAGACTGTTACAAATGGTAATTGTGAGATCCCACATTGGTCAGGGAGGAGAACGAAGCATTCTTTATAAAGATGTGGAAACCTCCCCCTAGCAAACGCGTTTTAAAAATCTTGAGGGGAAGTTCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTAGGCTGTCACAAATGGTAATTGTGAGATCCCGTATCGGTTGGGGAGGAGAACAAAGCATTCTTTATATGGATGTGGAAACCTCCTCCTAGCGGACGCGTTTTAAAAATCTTGAAGGGAAGTTCAAAAGGGAAAGCCCAAAGAGGACAGTATCTGCTTGCGGTGGGCTTAAGCTGTTACAAATGGTAATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGAAAAGCCCAAAGATAATAATATCTGCTAGCGGTGAACTTGGGTCATTACACTCATCATGTTTCATTGCATTTGAGTTAACAAATTGTTCTGTTTGTTATCAGCGATTAAACTGCATTTGAGTTAACAAATTGTTCTCTTTGTTATCAGCGATTAAACGACACCTTATTTATTTATTTTGAGGGGTGGTTGAAGTATTTGTTCATAATTGCCCCAACCCAACTACCTATTCATGTGAGCCATCACTTATAAAACATATGTTTAGAATTGCTTATTCGACCTACCCAAAATTTGTCATTAATGTTCAAAAAGTGGCTTACATCTAAGAAGAGGATCTTCAAACTGTGCCATCGTGTGTACCCTATCATTGTAAGAACAATTCAACTCTTTTAGTCCCTTTCTTTGACTTTTAATAGAAAATTAGAAAAACTAAATTCTAATTTCAGGTGAATGTTAATCGATTACTAAATACAAGATTGCATATAAGGCAACTTCCGAGACAACAAAATACTGTGAGATTTCACATTGGTTGGAGAGGAGAACGAAACATTTCTTATAAGTGTGTGGAAACCTCTCCATAGTAAACATGTTTTTAAAATTGTGAGGCTAACAACGTTATGTAATGTGCCAAAACAGACAATATTTATTAACATTGGGCCTGGGTTTTTACAAATGGTATTAGAGCTAGACACTAGCAAGGGCCCTGGCCCTCAAGGGGGTAGATTGTGAGATCTCACATTAATTAGAGAGGAGAACGAAGCATTCCTTATAAGGATGTGGAAACCTCTTCCTAGTAGACGCGTTTTAGAACTGTGAGGCTGTCGGTATTACGTAACAAGCCAAAGTGGACAATATTTGTTAGCGGTGGGCTTGGGCTGTTACAAACACCCACCCATTGTCCCAATAACACCATCTTGGTGGTAAAACATGTCTTCTCTCTCGAACATAACTCTACTGAGATGTTATAGATTAACCTGCAACTCCATGCCCAAACAACCTCCGTCATGATGGGTGTTCGTTAATTGGATTGAGTTGGATCAAAAAGTTTCTCAACTTTACCCCGTGTTTGGATATAACCAATTCGATGAAACCATGAATCAACCCAACTTAAAAAGATTTGCTAGCTCAACCTAATTTATCTCATTCAATCTGAGTATAATTTTCTGATTTGTCGGGTTCTTTGAACACCCGTACCTGCTGTTCTTAAGATCGAGGTACTGTTTTCAGTATGTGATGGACTATTCCTGACCAGGAGGAACAATGAGCATGTTGTGGAATTTTTTTTTTTTTTTTGTTGTTGTTTCAATGGAACTCAAGCTCCATATTGACCTCCACAGCCTTTTCTGATCTTGCCATGTCAACCTCTACTGAATGATCAATCACCAGATCTGCAGGGCCTGCAATGACAAGTAATTAGAGGTACTGTTCAGGCGAGATTCGAACTTCTAATCTTTTGGTTGAACATATAAATTTTACTTAATTGAATTATGTTTAGATTGGTCACTCACCCATAAATTAATCTTGTTGGAGTCACCACCAAGGTTATTGACTGTATCTCTCATACAAGCCAGGCTACTGCCAAATCATGTGTTTCCACCGAAGTTTGTTTGGAATGACTTTTCAAGTGCTTAAAAAGTCATTCCAAACGAACCCTAAGTTATAGTTATAACAAATTCACGTATCACACACCTC

mRNA sequence

ATGTACCCAAAATCTCTGACGAATCCTCTGAATTTCTCGTCAACAATGGCTTCCATCTATTGTTGTGCAGAATGCGGAGCAAATCTGAATCTGAATTCCAGTCATCTCTTCCCGCCGGATTTCTATTTCGAGGCCGGAAACAAGGGCACGCTTTCGTTTTCCTTGATCGACTCCACCAAGTTCAGGCTCGAGAAAGAGGACAAGCTCCGGCCATTCTTTGAGACCGTCAACTATTGGGGAATCCAGCGGAAACGCACCAAGATCAAGTGCAACTCATGTGCGCGTCTCGTCGGCTATGTTTACGACGATGGGCCTCCTCTCACCGAGAGTCCTGGCAACACAAGGAGGAAGAAACGAGGGAAAATTTTGCACACCTCGAAACCAAGCTCACAAGCTTTCTTAGCAACCAAAGCAGCTCCAAGCATTGTGCTAGGATTGGAGGTCCAGCTTAAGAAAAATCAGGTTCCTTCTTTTTCTCCCTTTATGATTAACTAGAAGGGCTAATGATTTTGAAGAGCCGACACTGAAAACATAGATCTCTACATATAATAATATAAGGATTAACATAGATCTCTACATGTTTTCAAACCTTCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGCGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAACCTTGAGGGGAAATTTGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTAGACTGTTACAAATGGTAATTGTGAGATCCCACATTGGTCAGGGAGGAGAACGAAGCATTCTTTATAAAGATGTGGAAACCTCCCCCTAGCAAACGCGTTTTAAAAATCTTGAGGGGAAGTTCGAAAGGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTAGGCTTAGGCTGTCACAAATGGTAATTGTGAGATCCCGTATCGGTTGGGGAGGAGAACAAAGCATTCTTTATATGGATGTGGAAACCTCCTCCTAGCGGACGCGTTTTAAAAATCTTGAAGGGAAGTTCAAAAGGGAAAGCCCAAAGAGGACAGTATCTGCTTGCGGTGGGCTTAAGCTGTTACAAATGGTAATTGTGAGATCCCACATCGGTTGGGGAGGAGAACAAAGCATTCTTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGAAAAGCCCAAAGATAATAATATCTGCTAGCGGTGAACTTGGGTCATTACACTCATCATGTTTCATTGCATTTGAGTTAACAAATTGTTCTGTTTGTTATCAGCGATTAAACTGCATTTGAGTTAACAAATTGTTCTCTTTGTTATCAGCGATTAAACGACACCTTATTTATTTATTTTGAGGGGTGGTTGAAGTATTTGTTCATAATTGCCCCAACCCAACTACCTATTCATGTGAGCCATCACTTATAAAACATATGTTTAGAATTGCTTATTCGACCTACCCAAAATTTGTCATTAATGTTCAAAAAGTGGCTTACATCTAAGAAGAGGATCTTCAAACTGTGCCATCGTGTGTACCCTATCATTGTAAGAACAATTCAACTCTTTTAGTCCCTTTCTTTGACTTTTAATAGAAAATTAGAAAAACTAAATTCTAATTTCAGGTGAATGTTAATCGATTACTAAATACAAGATTGCATATAAGGCAACTTCCGAGACAACAAAATACTGTGAGATTTCACATTGGTTGGAGAGGAGAACGAAACATTTCTTATAAGTGTGTGGAAACCTCTCCATAGTAAACATGTTTTTAAAATTGTGAGGCTAACAACGTTATGTAATGTGCCAAAACAGACAATATTTATTAACATTGGGCCTGGGTTTTTACAAATGGTATTAGAGCTAGACACTAGCAAGGGCCCTGGCCCTCAAGGGGGTAGATTGTGAGATCTCACATTAATTAGAGAGGAGAACGAAGCATTCCTTATAAGGATGTGGAAACCTCTTCCTAGTAGACGCGTTTTAGAACTGTGAGGCTGTCGGTATTACGTAACAAGCCAAAGTGGACAATATTTGTTAGCGGTGGGCTTGGGCTGTTACAAACACCCACCCATTGTCCCAATAACACCATCTTGGTGGTAAAACATGTCTTCTCTCTCGAACATAACTCTACTGAGATGTTATAGATTAACCTGCAACTCCATGCCCAAACAACCTCCGTCATGATGGGTGTTCGTTAATTGGATTGAGTTGGATCAAAAAGTTTCTCAACTTTACCCCGTGTTTGGATATAACCAATTCGATGAAACCATGAATCAACCCAACTTAAAAAGATTTGCTAGCTCAACCTAATTTATCTCATTCAATCTGAGTATAATTTTCTGATTTGTCGGGTTCTTTGAACACCCGTACCTGCTGTTCTTAAGATCGAGGTACTGTTTTCAGTATGTGATGGACTATTCCTGACCAGGAGGAACAATGAGCATGTTGTGGAATTTTTTTTTTTTTTTTGTTGTTGTTTCAATGGAACTCAAGCTCCATATTGACCTCCACAGCCTTTTCTGATCTTGCCATGTCAACCTCTACTGAATGATCAATCACCAGATCTGCAGGGCCTGCAATGACAAGTAATTAGAGGTACTGTTCAGGCGAGATTCGAACTTCTAATCTTTTGGTTGAACATATAAATTTTACTTAATTGAATTATGTTTAGATTGGTCACTCACCCATAAATTAATCTTGTTGGAGTCACCACCAAGGTTATTGACTGTATCTCTCATACAAGCCAGGCTACTGCCAAATCATGTGTTTCCACCGAAGTTTGTTTGGAATGACTTTTCAAGTGCTTAAAAAGTCATTCCAAACGAACCCTAAGTTATAGTTATAACAAATTCACGTATCACACACCTC

Coding sequence (CDS)

ATGTACCCAAAATCTCTGACGAATCCTCTGAATTTCTCGTCAACAATGGCTTCCATCTATTGTTGTGCAGAATGCGGAGCAAATCTGAATCTGAATTCCAGTCATCTCTTCCCGCCGGATTTCTATTTCGAGGCCGGAAACAAGGGCACGCTTTCGTTTTCCTTGATCGACTCCACCAAGTTCAGGCTCGAGAAAGAGGACAAGCTCCGGCCATTCTTTGAGACCGTCAACTATTGGGGAATCCAGCGGAAACGCACCAAGATCAAGTGCAACTCATGTGCGCGTCTCGTCGGCTATGTTTACGACGATGGGCCTCCTCTCACCGAGAGTCCTGGCAACACAAGGAGGAAGAAACGAGGGAAAATTTTGCACACCTCGAAACCAAGCTCACAAGCTTTCTTAGCAACCAAAGCAGCTCCAAGCATTGTGCTAGGATTGGAGGTCCAGCTTAAGAAAAATCAGGTTCCTTCTTTTTCTCCCTTTATGATTAACTAG

Protein sequence

MYPKSLTNPLNFSSTMASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFETVNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPGNTRRKKRGKILHTSKPSSQAFLATKAAPSIVLGLEVQLKKNQVPSFSPFMIN
Homology
[Close]
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match: A0A0A0L4W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002520 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.9e-47
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIY C ECG NLNLNS+HLFPPDFYFEAGNKGTLSFS IDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           +NYWGIQRKRTK+KCNSC  LVGYVYDDGPPLT+SPG
Sbjct: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match: A0A061DFL4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000130 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.5e-45
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIYCC ECG NLNL+++HLFPPDFYFEAGNKGTLSF+LID+TKF+LEKEDK+RPFFET
Sbjct: 1   MASIYCCTECGTNLNLSTTHLFPPDFYFEAGNKGTLSFALIDTTKFKLEKEDKIRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           V+YWGIQRKRTKIKCNSC +LVGYVYDDGPPLT   G
Sbjct: 61  VDYWGIQRKRTKIKCNSCGKLVGYVYDDGPPLTNGTG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match: F6HAH4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0264g00060 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 78/97 (80.41%), Postives = 90/97 (92.78%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MAS+Y C ECG NLNLN++HLFP DFYF+AGNKGTLSF+ +D+TKFR EKEDK+RPFFET
Sbjct: 1   MASVYSCRECGTNLNLNATHLFPSDFYFDAGNKGTLSFACVDATKFRFEKEDKIRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           ++YWGIQRKRTKIKCNSC RLVGY+YDDGPPLT+SPG
Sbjct: 61  LDYWGIQRKRTKIKCNSCGRLVGYIYDDGPPLTDSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match: K7LNL5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G081000 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 78/97 (80.41%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MAS+Y C ECG+NLNLNS+H +PPDFYFEAGNKG++SFS +D TKF+ EKEDKLRPFFET
Sbjct: 1   MASVYSCTECGSNLNLNSAHAYPPDFYFEAGNKGSVSFSAVDPTKFKFEKEDKLRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           VNYWGIQRKRTKIKCN+C  L+GYVYDDGPPLT SPG
Sbjct: 61  VNYWGIQRKRTKIKCNTCDCLLGYVYDDGPPLTNSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match: A0A0D2REI8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G005800 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.6e-42
Identity = 77/97 (79.38%), Postives = 86/97 (88.66%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIYCC ECG NLNL S++LFPPDFYFEAGNKGTLSF+ ID TKF  EKEDK RPFFET
Sbjct: 1   MASIYCCKECGTNLNLRSTYLFPPDFYFEAGNKGTLSFATIDDTKFNFEKEDKFRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           ++YWGIQR RTK+KC SC +LVGY+YDDGPPLT+SPG
Sbjct: 61  LDYWGIQRNRTKMKCKSCGKLVGYIYDDGPPLTDSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. TAIR10
Match: AT2G17705.1 (AT2G17705.1 unknown protein)

HSP 1 Score: 163.7 bits (413), Expect = 9.6e-41
Identity = 70/96 (72.92%), Postives = 82/96 (85.42%), Query Frame = 1 

Query: 17  ASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFETV 76
           ++IY C ECG++LNLN + LFPPDFYFEAGNKGTLSF+ +D+ KFR EKEDK+ PFFET+
Sbjct: 3   STIYTCKECGSDLNLNPNDLFPPDFYFEAGNKGTLSFAAVDAEKFRFEKEDKIMPFFETL 62

Query: 77  NYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           NYWGIQRKRTKIKC SC  L+GY+YDDGPPLT   G
Sbjct: 63  NYWGIQRKRTKIKCTSCNHLIGYIYDDGPPLTGGIG 98

[Close]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match: gi|449456857|ref|XP_004146165.1| (PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 8.5e-47
Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIY C ECG NLNLNS+HLFPPDFYFEAGNKGTLSFS IDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCTECGTNLNLNSTHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           +NYWGIQRKRTK+KCNSC  LVGYVYDDGPPLT+SPG
Sbjct: 61  LNYWGIQRKRTKLKCNSCGHLVGYVYDDGPPLTDSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match: gi|659095313|ref|XP_008448515.1| (PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-46
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIY C+ECG NLNLNSSHLFPPDFYFEAGNKGTLSFS IDSTKFRLEKEDKLRPFFET
Sbjct: 1   MASIYSCSECGTNLNLNSSHLFPPDFYFEAGNKGTLSFSFIDSTKFRLEKEDKLRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           +NYWGIQRKRTK+KC SC  LVGY+YDDGPPLT+SPG
Sbjct: 61  LNYWGIQRKRTKLKCTSCGHLVGYIYDDGPPLTDSPG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match: gi|590702299|ref|XP_007046590.1| (Uncharacterized protein TCM_000130 [Theobroma cacao])

HSP 1 Score: 188.7 bits (478), Expect = 7.9e-45
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIYCC ECG NLNL+++HLFPPDFYFEAGNKGTLSF+LID+TKF+LEKEDK+RPFFET
Sbjct: 1   MASIYCCTECGTNLNLSTTHLFPPDFYFEAGNKGTLSFALIDTTKFKLEKEDKIRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           V+YWGIQRKRTKIKCNSC +LVGYVYDDGPPLT   G
Sbjct: 61  VDYWGIQRKRTKIKCNSCGKLVGYVYDDGPPLTNGTG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match: gi|747047593|ref|XP_011069773.1| (PREDICTED: uncharacterized protein LOC105155579 [Sesamum indicum])

HSP 1 Score: 185.7 bits (470), Expect = 6.7e-44
Identity = 80/97 (82.47%), Postives = 89/97 (91.75%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MA++YCC ECGANLNL+  HL+PPDFYFEAGNK TLSFS +DS+KFR EKEDKLRPFFET
Sbjct: 1   MATMYCCRECGANLNLHGGHLYPPDFYFEAGNKNTLSFSAVDSSKFRFEKEDKLRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           VNYWGIQRKRTKIKCNSC +LVGY+YDDGPPLT+S G
Sbjct: 61  VNYWGIQRKRTKIKCNSCGKLVGYIYDDGPPLTDSNG 97

[Close]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match: gi|720035004|ref|XP_010266905.1| (PREDICTED: uncharacterized protein LOC104604307 [Nelumbo nucifera])

HSP 1 Score: 185.3 bits (469), Expect = 8.8e-44
Identity = 83/97 (85.57%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 16  MASIYCCAECGANLNLNSSHLFPPDFYFEAGNKGTLSFSLIDSTKFRLEKEDKLRPFFET 75
           MASIY CAECGANLNL ++ LFPPDFYFEAGNKGTLSFS +D TKFR EKEDK RPFFET
Sbjct: 1   MASIYSCAECGANLNLRTNLLFPPDFYFEAGNKGTLSFSSVDETKFRFEKEDKFRPFFET 60

Query: 76  VNYWGIQRKRTKIKCNSCARLVGYVYDDGPPLTESPG 113
           VNYWGIQRKRTKIKCNSC RLVGY+YDDGP LT+SPG
Sbjct: 61  VNYWGIQRKRTKIKCNSCGRLVGYIYDDGPSLTDSPG 97

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g10560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG14g10560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4W0_CUCSA5.9e-4789.69Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002520 PE=4 SV=1[more]
A0A061DFL4_THECC5.5e-4584.54Uncharacterized protein OS=Theobroma cacao GN=TCM_000130 PE=4 SV=1[more]
F6HAH4_VITVI1.4e-4380.41Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0264g00060 PE=4 SV=... [more]
K7LNL5_SOYBN1.2e-4280.41Uncharacterized protein OS=Glycine max GN=GLYMA_11G081000 PE=4 SV=1[more]
A0A0D2REI8_GOSRA2.6e-4279.38Uncharacterized protein OS=Gossypium raimondii GN=B456_003G005800 PE=4 SV=1[more]
BLAST of Cp4.1LG14g10560 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G17705.19.6e-4172.92 unknown protein[more]
BLAST of Cp4.1LG14g10560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456857|ref|XP_004146165.1|8.5e-4789.69PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis sativus][more]
gi|659095313|ref|XP_008448515.1|1.9e-4688.66PREDICTED: uncharacterized protein At4g08330, chloroplastic [Cucumis melo][more]
gi|590702299|ref|XP_007046590.1|7.9e-4584.54Uncharacterized protein TCM_000130 [Theobroma cacao][more]
gi|747047593|ref|XP_011069773.1|6.7e-4482.47PREDICTED: uncharacterized protein LOC105155579 [Sesamum indicum][more]
gi|720035004|ref|XP_010266905.1|8.8e-4485.57PREDICTED: uncharacterized protein LOC104604307 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0033743peptide-methionine (R)-S-oxide reductase activity
Vocabulary: INTERPRO
TermDefinition
IPR011057Mss4-like_sf
IPR002579Met_Sox_Rdtase_MsrB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g10560.1Cp4.1LG14g10560.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002579Peptide methionine sulphoxide reductase MrsBGENE3DG3DSA:2.170.150.20coord: 16..106
score: 1.
IPR011057Mss4-likeunknownSSF51316Mss4-likecoord: 19..106
score: 1.0
NoneNo IPR availablePANTHERPTHR33674FAMILY NOT NAMEDcoord: 13..107
score: 1.1
NoneNo IPR availablePANTHERPTHR33674:SF5SUBFAMILY NOT NAMEDcoord: 13..107
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g10560CmaCh16G012540Cucurbita maxima (Rimu)cmacpeB345
Cp4.1LG14g10560CmoCh16G013040Cucurbita moschata (Rifu)cmocpeB308
Cp4.1LG14g10560Cla008923Watermelon (97103) v1cpewmB202
Cp4.1LG14g10560Csa3G002520Cucumber (Chinese Long) v2cpecuB212
Cp4.1LG14g10560MELO3C013742Melon (DHL92) v3.5.1cpemeB184
Cp4.1LG14g10560CSPI03G00480Wild cucumber (PI 183967)cpecpiB215
Cp4.1LG14g10560MELO3C013742.2Melon (DHL92) v3.6.1cpemedB231
Cp4.1LG14g10560CsaV3_3G000500Cucumber (Chinese Long) v3cpecucB0255
Cp4.1LG14g10560Bhi11G000244Wax gourdcpewgoB0278
Cp4.1LG14g10560CsGy3G000460Cucumber (Gy14) v2cgybcpeB325
Cp4.1LG14g10560Carg19455Silver-seed gourdcarcpeB0601
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g10560Cucurbita pepo (Zucchini)cpecpeB241
Cp4.1LG14g10560Cucurbita pepo (Zucchini)cpecpeB244
Cp4.1LG14g10560Cucurbita pepo (Zucchini)cpecpeB252
Cp4.1LG14g10560Cucumber (Gy14) v1cgycpeB0036
Cp4.1LG14g10560Cucumber (Gy14) v1cgycpeB0845
Cp4.1LG14g10560Cucurbita maxima (Rimu)cmacpeB815
Cp4.1LG14g10560Cucurbita maxima (Rimu)cmacpeB872
Cp4.1LG14g10560Cucurbita moschata (Rifu)cmocpeB091
Cp4.1LG14g10560Cucurbita moschata (Rifu)cmocpeB608
Cp4.1LG14g10560Cucurbita moschata (Rifu)cmocpeB769
Cp4.1LG14g10560Wild cucumber (PI 183967)cpecpiB230
Cp4.1LG14g10560Cucumber (Chinese Long) v2cpecuB228
Cp4.1LG14g10560Bottle gourd (USVL1VR-Ls)cpelsiB165
Cp4.1LG14g10560Bottle gourd (USVL1VR-Ls)cpelsiB183
Cp4.1LG14g10560Watermelon (Charleston Gray)cpewcgB193
Cp4.1LG14g10560Watermelon (Charleston Gray)cpewcgB201
Cp4.1LG14g10560Watermelon (97103) v1cpewmB230
Cp4.1LG14g10560Melon (DHL92) v3.5.1cpemeB206
Cp4.1LG14g10560Melon (DHL92) v3.6.1cpemedB249
Cp4.1LG14g10560Silver-seed gourdcarcpeB0223
Cp4.1LG14g10560Silver-seed gourdcarcpeB0559
Cp4.1LG14g10560Cucumber (Chinese Long) v3cpecucB0282
Cp4.1LG14g10560Wax gourdcpewgoB0303