Csa2G423560 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G423560
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionZinc finger protein CONSTANS-like protein; contains IPR000315 (Zinc finger, B-box)
LocationChr2 : 21953604 .. 21954354 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGAAAACGCAAAAATGTGTAGAGGTGTGGAGGAGGGAAACCACGGTCACGCTCACGGTCGCGATGGTTGCCGGCAGTCTCCAGTGATCCAGAAGGGCGTTGTGTCGGCAGCTGGTGTGGTGATGTGCGAGCTGTGCAACTCGAAAGCTTCATTGTATTGCCAAGCAGATGATGCGTATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCAAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATACCTCATGGGAACTTCAACTGAGGTTCTTCTCCCTACCATCATCGCTTGCGCCGAAGCTAACGACTGTAACAACAATGGCAATCGTAACCCATGCTGCTCAGTAATGTTCAAAAGGCCCTTTCTCTTTTTGTAAAATCTTTCATGTTCTTCATCAATCTCTGTTTGTCTTCCAATCTTTCTTTCTTTAGTCTAGCAAAAATGGCTTTTGTAATCATACTGCAAAGAAACAGGGGTGAAATTCTTGTACATTTGTTTGTTTGTTGCAACCCCAAGTTGCTGGTTTGTTTAAGTTTTGTTGTTAAGTTAGATTAGAGAAGATTTTAAAAACAGACACGAGAAAAAAAACAAAATCGCTATCAAAGGCTGTTGTTTTCTGGGCAAAAAATGCAAAAATTAGTACCTGAAAAGAGGAGATTGGAAGTTGTATTATTTATTATTATGATCAAAATTGTTTTTATTATACTCTC

mRNA sequence

ATGTGTAGAGGTGTGGAGGAGGGAAACCACGGTCACGCTCACGGTCGCGATGGTTGCCGGCAGTCTCCAGTGATCCAGAAGGGCGTTGTGTCGGCAGCTGGTGTGGTGATGTGCGAGCTGTGCAACTCGAAAGCTTCATTGTATTGCCAAGCAGATGATGCGTATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCAAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATACCTCATGGGAACTTCAACTGAGGTTCTTCTCCCTACCATCATCGCTTGCGCCGAAGCTAACGACTGTAACAACAATGGCAATCGTAACCCATGCTGCTCAGTAATGTTCAAAAGGCCCTTTCTCTTTTTGTAA

Coding sequence (CDS)

ATGTGTAGAGGTGTGGAGGAGGGAAACCACGGTCACGCTCACGGTCGCGATGGTTGCCGGCAGTCTCCAGTGATCCAGAAGGGCGTTGTGTCGGCAGCTGGTGTGGTGATGTGCGAGCTGTGCAACTCGAAAGCTTCATTGTATTGCCAAGCAGATGATGCGTATTTATGTAGGAAATGTGACAAATGGGTTCATGGTGCAAATTTCTTAGCCCTCAGGCATATTAGGTGCATTCTCTGTAATGTTTGCCAAAACCTTACACAAAAATACCTCATGGGAACTTCAACTGAGGTTCTTCTCCCTACCATCATCGCTTGCGCCGAAGCTAACGACTGTAACAACAATGGCAATCGTAACCCATGCTGCTCAGTAATGTTCAAAAGGCCCTTTCTCTTTTTGTAA

Protein sequence

MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNPCCSVMFKRPFLFL*
Homology
[Close]
BLAST of Csa2G423560 vs. Swiss-Prot
Match: MIP1B_ARATH (B-box domain protein 31 OS=Arabidopsis thaliana GN=MIP1B PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRG+       + G  GCR            +  V CELC+  AS++C+AD A+LCRKC
Sbjct: 1   MCRGLNNEESRRSDG-GGCRSL------CTRPSVPVRCELCDGDASVFCEADSAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVLLPTIIACAEANDCNNNGNRN 120
           D+WVHGANFLA RH+R +LC  CQ LT++ L+G     V+LP++    E    N +   N
Sbjct: 61  DRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENRSEQDN 120

Query: 121 PCCSVMFKRPFLFL 134
                  + PF+FL
Sbjct: 121 ------HEVPFVFL 121

[Close]
BLAST of Csa2G423560 vs. Swiss-Prot
Match: MIP1A_ARATH (B-box domain protein 30 OS=Arabidopsis thaliana GN=MIP1A PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.2e-20
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRG E+     +    GC++         S    V CELC   A++YC+AD A+LCRKC
Sbjct: 1   MCRGFEKEEERRSDN-GGCQRLCT-----ESHKAPVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           D+WVH ANFLA RH+R ++C  C+ LT++ L+G +  V+LP I   A   + +++     
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSD----- 117

Query: 121 CCSVMFKRPFLFL 134
                 K PF+FL
Sbjct: 121 -----HKIPFVFL 117

[Close]
BLAST of Csa2G423560 vs. Swiss-Prot
Match: BBX32_ARATH (B-box zinc finger protein 32 OS=Arabidopsis thaliana GN=BBX32 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 1 

Query: 35  VVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT 94
           V  CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G 
Sbjct: 2   VSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGP 61

Query: 95  STEVLLPTIIACAEANDCNNNGNRNPCCS 124
               LLP          C +  + + CCS
Sbjct: 62  ----LLP----WPPRTTCCSESSSSSCCS 82

[Close]
BLAST of Csa2G423560 vs. Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-07
Identity = 25/57 (43.86%), Postives = 33/57 (57.89%), Query Frame = 1 

Query: 28 GVVSAAGVVMCELCNSK-ASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVC 84
          G  +   VV CE C  + A L+C+AD A LC  CD+ VH AN L+ +H+R  +C+ C
Sbjct: 2  GTSTTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58


HSP 2 Score: 30.0 bits (66), Expect = 2.4e+01
Identity = 14/41 (34.15%), Postives = 22/41 (53.66%), Query Frame = 1 

Query: 37 MCELCNSK-ASLYCQADDAYLCRKCDKWVHGANFLALRHIR 77
          +C+ C+ +  S+ C  D+  LC++CD  VHG+   +  H R
Sbjct: 54 ICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHER 94

[Close]
BLAST of Csa2G423560 vs. Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-07
Identity = 25/50 (50.00%), Postives = 32/50 (64.00%), Query Frame = 1 

Query: 37 MCELCNS-KASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQN 86
          +CE C + +A +YC AD A LC  CD  VH AN L+ RH+R +LC+ C+N
Sbjct: 13 VCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKN 62

[Close]
BLAST of Csa2G423560 vs. TrEMBL
Match: A0A0A0LTB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G423560 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-75
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC
Sbjct: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP
Sbjct: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120

Query: 121 CCSVMFKRPFLFL 134
           CCSVMFKRPFLFL
Sbjct: 121 CCSVMFKRPFLFL 133

[Close]
BLAST of Csa2G423560 vs. TrEMBL
Match: A0A0D2PWR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G209000 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-35
Identity = 77/133 (57.89%), Postives = 96/133 (72.18%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MC+G+E+G         G R S  +++G  S  G+V CELCNS+ASLYCQADDAYLCRKC
Sbjct: 1   MCKGLEQG---------GNRSSSCLKQGFSS--GLVNCELCNSRASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           DKWVH ANFLALRHIRC LC+ CQ+LTQ+YL+G S EV+LPT++  +E + CN++   N 
Sbjct: 61  DKWVHQANFLALRHIRCFLCSTCQSLTQRYLIGASHEVMLPTMVTSSETSHCNSDMETN- 120

Query: 121 CCSVMFKRPFLFL 134
             S   K PFLFL
Sbjct: 121 -LSTTLKTPFLFL 120

[Close]
BLAST of Csa2G423560 vs. TrEMBL
Match: W9SAN7_9ROSA (Zinc finger protein CONSTANS-LIKE 14 OS=Morus notabilis GN=L484_018276 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.2e-35
Identity = 75/135 (55.56%), Postives = 91/135 (67.41%), Query Frame = 1 

Query: 1   MCRGVEEGNH--GHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCR 60
           MCRGVEE N+  G          +P           V+ CELC+S+ASLYCQADDAYLCR
Sbjct: 1   MCRGVEESNYQGGFCKLPIPKEAAPRRPNASTVTCAVIACELCSSRASLYCQADDAYLCR 60

Query: 61  KCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNR 120
           KCD+WVHGANFLA RH+RC LCN CQ LTQ+YL+G S EV+LPT+++ +E + C +    
Sbjct: 61  KCDQWVHGANFLARRHVRCFLCNTCQKLTQRYLIGVSMEVVLPTLVSSSEGSQCQSLDTT 120

Query: 121 NPCCSVMFKRPFLFL 134
           N  CS   KRPFLFL
Sbjct: 121 N--CSRTLKRPFLFL 133

[Close]
BLAST of Csa2G423560 vs. TrEMBL
Match: M5WUZ1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022228mg PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.6e-34
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRGVEE          G RQ PV      S  G V CELC+ +ASLYC ADDAYLCRKC
Sbjct: 1   MCRGVEES---------GFRQPPVS-----SPTGYVCCELCSKRASLYCLADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           D+WVH ANFLALRH+RC+LCN CQNLTQ+Y++  S EV+LPTI++ AE   C++N  R  
Sbjct: 61  DQWVHEANFLALRHVRCLLCNTCQNLTQRYVVRISVEVMLPTILSWAERKRCSSNNKRRR 117

Query: 121 CCSVMFKRPFLFL 134
             S   KRPFLF+
Sbjct: 121 --STTLKRPFLFM 117

[Close]
BLAST of Csa2G423560 vs. TrEMBL
Match: B9HE36_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0007s02690g PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.6e-34
Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 1 

Query: 1   MCRGV--EEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCR 60
           MCRG+  E  N G +     C +  V  K   + + +V CELC S+ASLYCQADDA+LC+
Sbjct: 1   MCRGIHQERNNQGGS-----CGEEVVSSK---ATSRLVCCELCGSRASLYCQADDAFLCQ 60

Query: 61  KCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNR 120
           KCDKWVHGANFLA RH+RC+LCN CQNLTQ+YL+G STE+LLPTI++  E   CN+N  +
Sbjct: 61  KCDKWVHGANFLAQRHVRCMLCNTCQNLTQRYLIGASTELLLPTIVSWRERRQCNSNLEK 120

Query: 121 NPCCSVMFKRPFLFL 134
               S+  K PFLFL
Sbjct: 121 KSSGSL--KMPFLFL 125

[Close]
BLAST of Csa2G423560 vs. TAIR10
Match: AT3G21890.1 (AT3G21890.1 B-box type zinc finger family protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22
Identity = 55/134 (41.04%), Postives = 73/134 (54.48%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRG+       + G  GCR            +  V CELC+  AS++C+AD A+LCRKC
Sbjct: 1   MCRGLNNEESRRSDG-GGCRSL------CTRPSVPVRCELCDGDASVFCEADSAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT-STEVLLPTIIACAEANDCNNNGNRN 120
           D+WVHGANFLA RH+R +LC  CQ LT++ L+G     V+LP++    E    N +   N
Sbjct: 61  DRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENRSEQDN 120

Query: 121 PCCSVMFKRPFLFL 134
                  + PF+FL
Sbjct: 121 ------HEVPFVFL 121

[Close]
BLAST of Csa2G423560 vs. TAIR10
Match: AT4G15248.1 (AT4G15248.1 B-box type zinc finger family protein)

HSP 1 Score: 98.2 bits (243), Expect = 4.1e-21
Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRG E+     +    GC++         S    V CELC   A++YC+AD A+LCRKC
Sbjct: 1   MCRGFEKEEERRSDN-GGCQRLCT-----ESHKAPVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           D+WVH ANFLA RH+R ++C  C+ LT++ L+G +  V+LP I   A   + +++     
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSD----- 117

Query: 121 CCSVMFKRPFLFL 134
                 K PF+FL
Sbjct: 121 -----HKIPFVFL 117

[Close]
BLAST of Csa2G423560 vs. TAIR10
Match: AT4G27310.1 (AT4G27310.1 B-box type zinc finger family protein)

HSP 1 Score: 75.1 bits (183), Expect = 3.7e-14
Identity = 36/79 (45.57%), Postives = 43/79 (54.43%), Query Frame = 1 

Query: 38  CELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTE 97
           C+LCN  A +YC++D A LC  CD  VHGANFL  +H RC+LC+ CQ+LT     G    
Sbjct: 5   CDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLTPWKATGLR-- 64

Query: 98  VLLPTIIACAEANDCNNNG 117
            L PT   C       N G
Sbjct: 65  -LGPTFSVCESCVALKNAG 80

[Close]
BLAST of Csa2G423560 vs. TAIR10
Match: AT3G21150.1 (AT3G21150.1 B-box 32)

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 36/89 (40.45%), Postives = 48/89 (53.93%), Query Frame = 1 

Query: 35  VVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGT 94
           V  CELC ++A L+C AD A+LCR CD   H +NFL  RH R ++C  C++LTQ ++ G 
Sbjct: 2   VSFCELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSGP 61

Query: 95  STEVLLPTIIACAEANDCNNNGNRNPCCS 124
               LLP          C +  + + CCS
Sbjct: 62  ----LLP----WPPRTTCCSESSSSSCCS 82

[Close]
BLAST of Csa2G423560 vs. TAIR10
Match: AT5G54470.1 (AT5G54470.1 B-box type zinc finger family protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13
Identity = 38/86 (44.19%), Postives = 48/86 (55.81%), Query Frame = 1 

Query: 34  GVVMCELCNSKASLYCQADDAYLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMG 93
           G   CELC   A +YC++D A LC  CD  VHGANFL  +H+RC+LC+ CQ+ T     G
Sbjct: 2   GKKKCELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASG 61

Query: 94  TSTEVLLPTIIACAE--ANDCNNNGN 118
            +   L PT+  C    A   NNN +
Sbjct: 62  LN---LGPTVSICESCLARKKNNNSS 84

[Close]
BLAST of Csa2G423560 vs. NCBI nr
Match: gi|700208157|gb|KGN63276.1| (hypothetical protein Csa_2G423560 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-75
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC
Sbjct: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP
Sbjct: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120

Query: 121 CCSVMFKRPFLFL 134
           CCSVMFKRPFLFL
Sbjct: 121 CCSVMFKRPFLFL 133

[Close]
BLAST of Csa2G423560 vs. NCBI nr
Match: gi|659111641|ref|XP_008455833.1| (PREDICTED: uncharacterized protein LOC103495935 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 3.5e-67
Identity = 123/139 (88.49%), Postives = 126/139 (90.65%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHG------RDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDA 60
           MCRGVEEGNHGH HG      R GCRQSPVIQKG VSAAGV+MCELCNSKASLYCQADDA
Sbjct: 1   MCRGVEEGNHGHGHGHSHGHGRGGCRQSPVIQKGDVSAAGVLMCELCNSKASLYCQADDA 60

Query: 61  YLCRKCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNN 120
           YLCRKCDKWVHGANFLALRHIRCILC+VCQNLTQKYLMGTSTEVLLPTIIAC +ANDCNN
Sbjct: 61  YLCRKCDKWVHGANFLALRHIRCILCDVCQNLTQKYLMGTSTEVLLPTIIACTKANDCNN 120

Query: 121 NGNRNPCCSVMFKRPFLFL 134
           NGN N CCSVM KRPFLFL
Sbjct: 121 NGNLNTCCSVMLKRPFLFL 139

[Close]
BLAST of Csa2G423560 vs. NCBI nr
Match: gi|763764549|gb|KJB31803.1| (hypothetical protein B456_005G209000 [Gossypium raimondii])

HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35
Identity = 77/133 (57.89%), Postives = 96/133 (72.18%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MC+G+E+G         G R S  +++G  S  G+V CELCNS+ASLYCQADDAYLCRKC
Sbjct: 1   MCKGLEQG---------GNRSSSCLKQGFSS--GLVNCELCNSRASLYCQADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           DKWVH ANFLALRHIRC LC+ CQ+LTQ+YL+G S EV+LPT++  +E + CN++   N 
Sbjct: 61  DKWVHQANFLALRHIRCFLCSTCQSLTQRYLIGASHEVMLPTMVTSSETSHCNSDMETN- 120

Query: 121 CCSVMFKRPFLFL 134
             S   K PFLFL
Sbjct: 121 -LSTTLKTPFLFL 120

[Close]
BLAST of Csa2G423560 vs. NCBI nr
Match: gi|703149191|ref|XP_010109541.1| (Zinc finger protein CONSTANS-LIKE 14 [Morus notabilis])

HSP 1 Score: 155.6 bits (392), Expect = 6.1e-35
Identity = 75/135 (55.56%), Postives = 91/135 (67.41%), Query Frame = 1 

Query: 1   MCRGVEEGNH--GHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCR 60
           MCRGVEE N+  G          +P           V+ CELC+S+ASLYCQADDAYLCR
Sbjct: 1   MCRGVEESNYQGGFCKLPIPKEAAPRRPNASTVTCAVIACELCSSRASLYCQADDAYLCR 60

Query: 61  KCDKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNR 120
           KCD+WVHGANFLA RH+RC LCN CQ LTQ+YL+G S EV+LPT+++ +E + C +    
Sbjct: 61  KCDQWVHGANFLARRHVRCFLCNTCQKLTQRYLIGVSMEVVLPTLVSSSEGSQCQSLDTT 120

Query: 121 NPCCSVMFKRPFLFL 134
           N  CS   KRPFLFL
Sbjct: 121 N--CSRTLKRPFLFL 133

[Close]
BLAST of Csa2G423560 vs. NCBI nr
Match: gi|595952254|ref|XP_007216433.1| (hypothetical protein PRUPE_ppa022228mg [Prunus persica])

HSP 1 Score: 153.7 bits (387), Expect = 2.3e-34
Identity = 77/133 (57.89%), Postives = 91/133 (68.42%), Query Frame = 1 

Query: 1   MCRGVEEGNHGHAHGRDGCRQSPVIQKGVVSAAGVVMCELCNSKASLYCQADDAYLCRKC 60
           MCRGVEE          G RQ PV      S  G V CELC+ +ASLYC ADDAYLCRKC
Sbjct: 1   MCRGVEES---------GFRQPPVS-----SPTGYVCCELCSKRASLYCLADDAYLCRKC 60

Query: 61  DKWVHGANFLALRHIRCILCNVCQNLTQKYLMGTSTEVLLPTIIACAEANDCNNNGNRNP 120
           D+WVH ANFLALRH+RC+LCN CQNLTQ+Y++  S EV+LPTI++ AE   C++N  R  
Sbjct: 61  DQWVHEANFLALRHVRCLLCNTCQNLTQRYVVRISVEVMLPTILSWAERKRCSSNNKRRR 117

Query: 121 CCSVMFKRPFLFL 134
             S   KRPFLF+
Sbjct: 121 --STTLKRPFLFM 117

The following BLAST results are available for this feature:
BLAST of Csa2G423560 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIP1B_ARATH1.1e-2041.04B-box domain protein 31 OS=Arabidopsis thaliana GN=MIP1B PE=2 SV=1[more]
MIP1A_ARATH7.2e-2039.10B-box domain protein 30 OS=Arabidopsis thaliana GN=MIP1A PE=1 SV=1[more]
BBX32_ARATH1.1e-1240.45B-box zinc finger protein 32 OS=Arabidopsis thaliana GN=BBX32 PE=1 SV=1[more]
COL14_ARATH2.4e-0743.86Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2[more]
COLX_ARATH3.1e-0750.00Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2... [more]
BLAST of Csa2G423560 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTB0_CUCSA1.1e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G423560 PE=4 SV=1[more]
A0A0D2PWR3_GOSRA1.9e-3557.89Uncharacterized protein OS=Gossypium raimondii GN=B456_005G209000 PE=4 SV=1[more]
W9SAN7_9ROSA4.2e-3555.56Zinc finger protein CONSTANS-LIKE 14 OS=Morus notabilis GN=L484_018276 PE=4 SV=1[more]
M5WUZ1_PRUPE1.6e-3457.89Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022228mg PE=4 SV=1[more]
B9HE36_POPTR3.6e-3456.30Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0007s02690g PE=4 SV=1[more]
BLAST of Csa2G423560 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G21890.16.3e-2241.04 B-box type zinc finger family protein[more]
AT4G15248.14.1e-2139.10 B-box type zinc finger family protein[more]
AT4G27310.13.7e-1445.57 B-box type zinc finger family protein[more]
AT3G21150.16.3e-1440.45 B-box 32[more]
AT5G54470.11.1e-1344.19 B-box type zinc finger family protein[more]
BLAST of Csa2G423560 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208157|gb|KGN63276.1|1.6e-75100.00hypothetical protein Csa_2G423560 [Cucumis sativus][more]
gi|659111641|ref|XP_008455833.1|3.5e-6788.49PREDICTED: uncharacterized protein LOC103495935 [Cucumis melo][more]
gi|763764549|gb|KJB31803.1|2.7e-3557.89hypothetical protein B456_005G209000 [Gossypium raimondii][more]
gi|703149191|ref|XP_010109541.1|6.1e-3555.56Zinc finger protein CONSTANS-LIKE 14 [Morus notabilis][more]
gi|595952254|ref|XP_007216433.1|2.3e-3457.89hypothetical protein PRUPE_ppa022228mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0008270 zinc ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU097911cucumber EST collection version 3.0transcribed_cluster
CU106542cucumber EST collection version 3.0transcribed_cluster
CU153042cucumber EST collection version 3.0transcribed_cluster
CU153428cucumber EST collection version 3.0transcribed_cluster
CU154148cucumber EST collection version 3.0transcribed_cluster
CU172411cucumber EST collection version 3.0transcribed_cluster
CU176770cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G423560.1Csa2G423560.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU106542CU106542transcribed_cluster
CU097911CU097911transcribed_cluster
CU153428CU153428transcribed_cluster
CU176770CU176770transcribed_cluster
CU154148CU154148transcribed_cluster
CU172411CU172411transcribed_cluster
CU153042CU153042transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 37..66
score: 1.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 33..79
score: 1.
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 33..79
score: 8
NoneNo IPR availablePANTHERPTHR31717FAMILY NOT NAMEDcoord: 35..115
score: 3.0
NoneNo IPR availablePANTHERPTHR31717:SF11B-BOX TYPE ZINC FINGER-CONTAINING PROTEINcoord: 35..115
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G423560Cla007688Watermelon (97103) v1cuwmB145
Csa2G423560Cla010505Watermelon (97103) v1cuwmB142
Csa2G423560MELO3C018801Melon (DHL92) v3.5.1cumeB103
Csa2G423560MELO3C019231Melon (DHL92) v3.5.1cumeB097
Csa2G423560ClCG02G001760Watermelon (Charleston Gray)cuwcgB128
Csa2G423560ClCG02G008410Watermelon (Charleston Gray)cuwcgB123
Csa2G423560Lsi10G001570Bottle gourd (USVL1VR-Ls)culsiB094
Csa2G423560Lsi11G014730Bottle gourd (USVL1VR-Ls)culsiB099
Csa2G423560MELO3C019231.2Melon (DHL92) v3.6.1cumedB088
Csa2G423560MELO3C018801.2Melon (DHL92) v3.6.1cumedB097
Csa2G423560Cla97C02G035010Watermelon (97103) v2cuwmbB119
Csa2G423560Cla97C02G028150Watermelon (97103) v2cuwmbB124
Csa2G423560Bhi05G001156Wax gourdcuwgoB151
Csa2G423560CSPI07G03900Wild cucumber (PI 183967)cpicuB326
Csa2G423560CSPI02G26710Wild cucumber (PI 183967)cpicuB065
Csa2G423560Cucsa.072910Cucumber (Gy14) v1cgycuB066
Csa2G423560Cucsa.148340Cucumber (Gy14) v1cgycuB213
Csa2G423560CmaCh20G006370Cucurbita maxima (Rimu)cmacuB539
Csa2G423560CmaCh11G018410Cucurbita maxima (Rimu)cmacuB114
Csa2G423560CmoCh20G006090Cucurbita moschata (Rifu)cmocuB534
Csa2G423560CmoCh19G009590Cucurbita moschata (Rifu)cmocuB493
Csa2G423560CmoCh11G019140Cucurbita moschata (Rifu)cmocuB101
Csa2G423560Cp4.1LG15g07580Cucurbita pepo (Zucchini)cpecuB233
Csa2G423560Cp4.1LG04g03390Cucurbita pepo (Zucchini)cpecuB663
Csa2G423560Cp4.1LG16g04540Cucurbita pepo (Zucchini)cpecuB269
Csa2G423560CsGy7G003550Cucumber (Gy14) v2cgybcuB296
Csa2G423560Carg03147Silver-seed gourdcarcuB0361
Csa2G423560Carg19181Silver-seed gourdcarcuB0889
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa2G423560Csa7G044810Cucumber (Chinese Long) v2cucuB078
The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G423560Melon (DHL92) v3.6.1cumedB148
Csa2G423560Silver-seed gourdcarcuB0025
Csa2G423560Wax gourdcuwgoB174
Csa2G423560Cucumber (Gy14) v1cgycuB020
Csa2G423560Cucurbita maxima (Rimu)cmacuB505
Csa2G423560Cucurbita maxima (Rimu)cmacuB589
Csa2G423560Cucurbita moschata (Rifu)cmocuB578
Csa2G423560Cucurbita moschata (Rifu)cmocuB841
Csa2G423560Watermelon (Charleston Gray)cuwcgB110
Csa2G423560Watermelon (97103) v1cuwmB134
Csa2G423560Cucurbita pepo (Zucchini)cpecuB705
Csa2G423560Cucumber (Gy14) v2cgybcuB057