Carg19181 (gene) Silver-seed gourd

Overview
NameCarg19181
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger, B-box
LocationCucurbita_argyrosperma_scaffold_099 : 145676 .. 146083 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGCAAAGGAGTAGGACAGGAAGAAACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCGAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATCTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATTGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAGCTTCTGCAAACTCCTTGTCTCTTTCTTTAA

mRNA sequence

ATGTGCAAAGGAGTAGGACAGGAAGAAACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCGAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATCTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATTGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAGCTTCTGCAAACTCCTTGTCTCTTTCTTTAA

Coding sequence (CDS)

ATGTGCAAAGGAGTAGGACAGGAAGAAACCCAAGCCACCGTCCAGCGGCGGCGGACTACCGAGATGGCGAGGGCGAAGGGCGGTGGAGGCGATCCAGAACCGTGCGAGCTCTGCGGTTCGAGGGCGTCGCTGTATTGCCAAGCGGACGAGGCGTATCTGTGCCAAAAGTGCGACAAAATGGTTCATAGCGCGAATTTCTTGGCGCTGCGACACGTACGGTGCCTGCTGTGCAACACGTGCCAGAGGGCGACGCGGAGGTATCTGTTGGGAGCGTCGATGGAGGTTGTGCTTCCGAGTATTGTGAGCAGTTCATTGATGGAGAGGAATTTCCAAAATTACCACTGTGGTTCAGATGATTATGATCAAAATTCCTCCCAGCTTCTGCAAACTCCTTGTCTCTTTCTTTAA

Protein sequence

MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDYDQNSSQLLQTPCLFL
Homology
[Close]
BLAST of Carg19181 vs. NCBI nr
Match: XP_023511647.1 (B-box domain protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.4 bits (703), Expect = 1.0e-70
Identity = 131/135 (97.04%), Postives = 134/135 (99.26%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGVGQE+TQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM
Sbjct: 1   MCKGVGQEDTQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120
           VHSANFLALRHVRCLLCNTCQRATRRY+LGASMEVVLPSIVSSS MERNFQNYHCGSDDY
Sbjct: 61  VHSANFLALRHVRCLLCNTCQRATRRYVLGASMEVVLPSIVSSSSMERNFQNYHCGSDDY 120

Query: 121 DQNSSQLLQTPCLFL 136
           DQNSSQLL+TPCLFL
Sbjct: 121 DQNSSQLLKTPCLFL 135

[Close]
BLAST of Carg19181 vs. NCBI nr
Match: XP_022953004.1 (B-box domain protein 30 [Cucurbita moschata])

HSP 1 Score: 238.4 bits (607), Expect = 1.4e-59
Identity = 113/114 (99.12%), Postives = 113/114 (99.12%), Query Frame = 0 

Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 136
           RATRRYLLGASMEVVLPSIVSSS MERNFQNYHCGSDDYDQNSSQLLQTPCLFL
Sbjct: 61  RATRRYLLGASMEVVLPSIVSSSSMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 114

[Close]
BLAST of Carg19181 vs. NCBI nr
Match: XP_022968882.1 (B-box domain protein 30 [Cucurbita maxima])

HSP 1 Score: 209.9 bits (533), Expect = 5.3e-51
Identity = 104/114 (91.23%), Postives = 106/114 (92.98%), Query Frame = 0 

Query: 22  MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 81
           MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ
Sbjct: 1   MARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQ 60

Query: 82  RATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 136
           R TRRYLLGASMEVVLPSIVSSS M+RNFQN    SD YDQNSSQLL+T CLFL
Sbjct: 61  RQTRRYLLGASMEVVLPSIVSSSSMDRNFQN---DSDGYDQNSSQLLKTLCLFL 111

[Close]
BLAST of Carg19181 vs. NCBI nr
Match: XP_008455408.1 (PREDICTED: B-box zinc finger protein 21 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 9.4e-48
Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV QEET+A V++R TT+   A+  GGDP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAAR--GGDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120
           VH+ANFLALRHVRCLLCNTCQ  T+RYLLGASMEVV+PSIVS    ERNF NYHC SD +
Sbjct: 61  VHNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVS---RERNFLNYHCDSDGF 120

Query: 121 DQNSSQLLQTPCLFL 136
            QN SQ+L+TPCLFL
Sbjct: 121 VQNCSQVLKTPCLFL 130

[Close]
BLAST of Carg19181 vs. NCBI nr
Match: KGN43541.1 (hypothetical protein Csa_7G044810 [Cucumis sativus])

HSP 1 Score: 170.2 bits (430), Expect = 4.7e-39
Identity = 90/136 (66.18%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV ++E                     DP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGV-EQEXXXXXXXXXXXXXXXXXXXXXDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL-PSIVSSSLMERNFQNYHCGSDD 120
           VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVL PS+VS    ERNF NYHC SD 
Sbjct: 61  VHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPPSLVS---RERNFLNYHCDSDS 120

Query: 121 YDQNSSQLLQTPCLFL 136
           + QN SQ+L+TPCLFL
Sbjct: 121 FVQNCSQVLKTPCLFL 132

[Close]
BLAST of Carg19181 vs. TAIR10
Match: AT4G15248.1 (B-box type zinc finger family protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKC 60
           MC+G  +EE + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKA------PVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNY 114
           D+ VHSANFLA RH+R ++C TC++ TRR L+G +  VVLP I   + +E +  ++
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSDH 110

[Close]
BLAST of Carg19181 vs. TAIR10
Match: AT3G21890.1 (B-box type zinc finger family protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.0e-19
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAY 60
           MC+G+  EE++            R+ GGG          P  CELC   AS++C+AD A+
Sbjct: 1   MCRGLNNEESR------------RSDGGGCRSLCTRPSVPVRCELCDGDASVFCEADSAF 60

Query: 61  LCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-ASMEVVLPSIVS---SSLMER 115
           LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR L+G     VVLPS+ +   +++  R
Sbjct: 61  LCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENR 114

[Close]
BLAST of Carg19181 vs. TAIR10
Match: AT5G54470.1 (B-box type zinc finger family protein)

HSP 1 Score: 69.7 bits (169), Expect = 1.6e-12
Identity = 36/92 (39.13%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 35  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASME 94
           CELC   A +YC++D+A LC  CD  VH ANFL  +H+RCLLC+ CQ  T     G ++ 
Sbjct: 6   CELCCGVARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSACQSHTPWKASGLNLG 65

Query: 95  VVLPSIVSSSLMERNFQNYHCGSDDYDQNSSQ 127
             + SI  S L  +   N      D + N  +
Sbjct: 66  PTV-SICESCLARKKNNNSSLAGRDQNLNQEE 96

[Close]
BLAST of Carg19181 vs. TAIR10
Match: AT4G27310.1 (B-box type zinc finger family protein)

HSP 1 Score: 67.8 bits (164), Expect = 5.9e-12
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRAT 85
          C+LC   A +YC++D+A LC  CD  VH ANFL  +H RCLLC+ CQ  T
Sbjct: 5  CDLCNGVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSACQSLT 54

[Close]
BLAST of Carg19181 vs. TAIR10
Match: AT3G21150.1 (B-box 32)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-11
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG 91
          CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]
BLAST of Carg19181 vs. Swiss-Prot
Match: sp|Q1G3I2|MIP1A_ARATH (B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 51/116 (43.97%), Postives = 75/116 (64.66%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQ---RRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKC 60
           MC+G  +EE + +     +R  TE  +A      P  CELCG  A++YC+AD A+LC+KC
Sbjct: 1   MCRGFEKEEERRSDNGGCQRLCTESHKA------PVSCELCGENATVYCEADAAFLCRKC 60

Query: 61  DKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNY 114
           D+ VHSANFLA RH+R ++C TC++ TRR L+G +  VVLP I   + +E +  ++
Sbjct: 61  DRWVHSANFLARRHLRRVICTTCRKLTRRCLVGDNFNVVLPEIRMIARIEEHSSDH 110

[Close]
BLAST of Carg19181 vs. Swiss-Prot
Match: sp|Q9LRM4|MIP1B_ARATH (B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGG--------GDPEPCELCGSRASLYCQADEAY 60
           MC+G+  EE++            R+ GGG          P  CELC   AS++C+AD A+
Sbjct: 1   MCRGLNNEESR------------RSDGGGCRSLCTRPSVPVRCELCDGDASVFCEADSAF 60

Query: 61  LCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG-ASMEVVLPSIVS---SSLMER 115
           LC+KCD+ VH ANFLA RHVR +LC +CQ+ TRR L+G     VVLPS+ +   +++  R
Sbjct: 61  LCRKCDRWVHGANFLAWRHVRRVLCTSCQKLTRRCLVGDHDFHVVLPSVTTVGETTVENR 114

[Close]
BLAST of Carg19181 vs. Swiss-Prot
Match: sp|Q9LJB7|BBX32_ARATH (B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.1e-10
Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 0 

Query: 35 CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLG 91
          CELCG+ A L+C AD A+LC+ CD   H++NFL  RH R ++C  C+  T+ ++ G
Sbjct: 5  CELCGAEADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNCKSLTQNFVSG 60

[Close]
BLAST of Carg19181 vs. Swiss-Prot
Match: sp|Q9C9A9|COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 0 

Query: 35 CELC--GSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLL 77
          C+ C   SRAS YC AD+A+LCQ CD  +HSAN LA RH R  L
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65

[Close]
BLAST of Carg19181 vs. Swiss-Prot
Match: sp|Q9C7E8|COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-06
Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 0 

Query: 34 PCELCGSR-ASLYCQADEAYLCQKCDKMVHSANFLALRHVR 74
          PC+ CG R A L+C+AD A LC  CD+ VH+AN L+ +HVR
Sbjct: 8  PCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR 48

[Close]
BLAST of Carg19181 vs. TrEMBL
Match: tr|A0A1S3C0U6|A0A1S3C0U6_CUCME (B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 6.2e-48
Identity = 100/135 (74.07%), Postives = 112/135 (82.96%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV QEET+A V++R TT+   A+  GGDP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGVEQEETKAPVRQRLTTDDRAAR--GGDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120
           VH+ANFLALRHVRCLLCNTCQ  T+RYLLGASMEVV+PSIVS    ERNF NYHC SD +
Sbjct: 61  VHNANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVVPSIVS---RERNFLNYHCDSDGF 120

Query: 121 DQNSSQLLQTPCLFL 136
            QN SQ+L+TPCLFL
Sbjct: 121 VQNCSQVLKTPCLFL 130

[Close]
BLAST of Carg19181 vs. TrEMBL
Match: tr|A0A0A0K6V9|A0A0A0K6V9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.1e-39
Identity = 90/136 (66.18%), Postives = 98/136 (72.06%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKGV ++E                     DP  CELCGSRASLYC+ADEAYLC KCDK 
Sbjct: 1   MCKGV-EQEXXXXXXXXXXXXXXXXXXXXXDPVRCELCGSRASLYCEADEAYLCGKCDKS 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVL-PSIVSSSLMERNFQNYHCGSDD 120
           VHSANFLALRHVRCLLCNTCQ  T+RYLLGASMEVVL PS+VS    ERNF NYHC SD 
Sbjct: 61  VHSANFLALRHVRCLLCNTCQSHTQRYLLGASMEVVLPPSLVS---RERNFLNYHCDSDS 120

Query: 121 YDQNSSQLLQTPCLFL 136
           + QN SQ+L+TPCLFL
Sbjct: 121 FVQNCSQVLKTPCLFL 132

[Close]
BLAST of Carg19181 vs. TrEMBL
Match: tr|A0A2I4HBB2|A0A2I4HBB2_9ROSI (B-box domain protein 30 OS=Juglans regia OX=51240 GN=LOC109015440 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-28
Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPE----PCELCGSRASLYCQADEAYLCQK 60
           MC+G+ +E+    + R ++T +  A+     P     PCELCGSRASLYCQAD+A+LC+K
Sbjct: 1   MCRGLEEEKLGGGLCRLQSTHL-DAEDTPPSPTAATVPCELCGSRASLYCQADDAFLCRK 60

Query: 61  CDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCG 120
           CDK VH ANFLALRH+RC LCNTCQ  T+RYLLGAS EV+LP+IVS S       ++ C 
Sbjct: 61  CDKCVHGANFLALRHIRCFLCNTCQSLTQRYLLGASFEVMLPTIVSLS----EGSDHSCN 120

Query: 121 SDDYDQNSSQLLQTPCLFL 136
           S D  +  S+ L+ P L L
Sbjct: 121 S-DIGKQCSRKLKMPFLLL 133

[Close]
BLAST of Carg19181 vs. TrEMBL
Match: tr|B9RPQ5|B9RPQ5_RICCO (DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1549750 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 5.5e-28
Identity = 63/101 (62.38%), Postives = 79/101 (78.22%), Query Frame = 0 

Query: 35  CELCGSRASLYCQADEAYLCQKCDKMVHSANFLALRHVRCLLCNTCQRATRRYLLGASME 94
           CELCGSRASLYCQAD+A+LC+KCDK VH ANFLA RH+RC LCNTCQ  T+RYL+GAS+E
Sbjct: 35  CELCGSRASLYCQADDAFLCRKCDKWVHGANFLANRHIRCFLCNTCQNLTQRYLIGASVE 94

Query: 95  VVLPSIVSSSLMERNFQNYHCGSDDYDQNSSQLLQTPCLFL 136
           +VLP++V SS  +R      C S++ D+  S+ L+ P LFL
Sbjct: 95  MVLPTMVMSSKDQRRI----CDSNNDDKQCSKSLKMPFLFL 131

[Close]
BLAST of Carg19181 vs. TrEMBL
Match: tr|A0A0D2PWR3|A0A0D2PWR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G209000 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.1e-28
Identity = 71/135 (52.59%), Postives = 89/135 (65.93%), Query Frame = 0 

Query: 1   MCKGVGQEETQATVQRRRTTEMARAKGGGGDPEPCELCGSRASLYCQADEAYLCQKCDKM 60
           MCKG+ Q   +++            +G       CELC SRASLYCQAD+AYLC+KCDK 
Sbjct: 1   MCKGLEQGGNRSS--------SCLKQGFSSGLVNCELCNSRASLYCQADDAYLCRKCDKW 60

Query: 61  VHSANFLALRHVRCLLCNTCQRATRRYLLGASMEVVLPSIVSSSLMERNFQNYHCGSDDY 120
           VH ANFLALRH+RC LC+TCQ  T+RYL+GAS EV+LP++V+SS      +  HC S D 
Sbjct: 61  VHQANFLALRHIRCFLCSTCQSLTQRYLIGASHEVMLPTMVTSS------ETSHCNS-DM 120

Query: 121 DQNSSQLLQTPCLFL 136
           + N S  L+TP LFL
Sbjct: 121 ETNLSTTLKTPFLFL 120

The following BLAST results are available for this feature:
BLAST of Carg19181 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023511647.11.0e-7097.04B-box domain protein 30-like [Cucurbita pepo subsp. pepo][more]
XP_022953004.11.4e-5999.12B-box domain protein 30 [Cucurbita moschata][more]
XP_022968882.15.3e-5191.23B-box domain protein 30 [Cucurbita maxima][more]
XP_008455408.19.4e-4874.07PREDICTED: B-box zinc finger protein 21 [Cucumis melo][more]
KGN43541.14.7e-3966.18hypothetical protein Csa_7G044810 [Cucumis sativus][more]
BLAST of Carg19181 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15248.11.1e-2143.97B-box type zinc finger family protein[more]
AT3G21890.11.0e-1942.06B-box type zinc finger family protein[more]
AT5G54470.11.6e-1239.13B-box type zinc finger family protein[more]
AT4G27310.15.9e-1254.00B-box type zinc finger family protein[more]
AT3G21150.11.7e-1146.43B-box 32[more]
BLAST of Carg19181 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q1G3I2|MIP1A_ARATH1.9e-2043.97B-box domain protein 30 OS=Arabidopsis thaliana OX=3702 GN=MIP1A PE=1 SV=1[more]
sp|Q9LRM4|MIP1B_ARATH1.8e-1842.06B-box domain protein 31 OS=Arabidopsis thaliana OX=3702 GN=MIP1B PE=2 SV=1[more]
sp|Q9LJB7|BBX32_ARATH3.1e-1046.43B-box zinc finger protein 32 OS=Arabidopsis thaliana OX=3702 GN=BBX32 PE=1 SV=1[more]
sp|Q9C9A9|COL7_ARATH1.6e-0659.09Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2... [more]
sp|Q9C7E8|COL15_ARATH2.7e-0656.10Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana OX=3702 GN=COL15 PE... [more]
BLAST of Carg19181 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C0U6|A0A1S3C0U6_CUCME6.2e-4874.07B-box zinc finger protein 21 OS=Cucumis melo OX=3656 GN=LOC103495577 PE=4 SV=1[more]
tr|A0A0A0K6V9|A0A0A0K6V9_CUCSA3.1e-3966.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G044810 PE=4 SV=1[more]
tr|A0A2I4HBB2|A0A2I4HBB2_9ROSI5.5e-2852.52B-box domain protein 30 OS=Juglans regia OX=51240 GN=LOC109015440 PE=4 SV=1[more]
tr|B9RPQ5|B9RPQ5_RICCO5.5e-2862.38DNA binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_1549750 PE=4 S... [more]
tr|A0A0D2PWR3|A0A0D2PWR3_GOSRA7.1e-2852.59Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_005G209000 PE=4 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg19181-RACarg19181-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 30..76
e-value: 2.9E-8
score: 43.4
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 34..72
e-value: 1.3E-6
score: 28.3
IPR000315B-box-type zinc fingerCDDcd00021BBOXcoord: 34..76
e-value: 5.47862E-4
score: 33.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availablePANTHERPTHR31717:SF26B-BOX DOMAIN PROTEIN 28-RELATEDcoord: 22..99
NoneNo IPR availablePANTHERPTHR31717FAMILY NOT NAMEDcoord: 22..99

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg19181Cla007688Watermelon (97103) v1carwmB0880
Carg19181Cla010505Watermelon (97103) v1carwmB0881
Carg19181Csa2G423560Cucumber (Chinese Long) v2carcuB0889
Carg19181Csa7G044810Cucumber (Chinese Long) v2carcuB0891
Carg19181MELO3C018801Melon (DHL92) v3.5.1carmeB0865
Carg19181MELO3C019231Melon (DHL92) v3.5.1carmeB0863
Carg19181ClCG02G001760Watermelon (Charleston Gray)carwcgB0851
Carg19181ClCG02G008410Watermelon (Charleston Gray)carwcgB0852
Carg19181CSPI02G26710Wild cucumber (PI 183967)carcpiB0909
Carg19181CSPI07G03900Wild cucumber (PI 183967)carcpiB0911
Carg19181Cucsa.148340Cucumber (Gy14) v1carcgyB0997
Carg19181Cucsa.072910Cucumber (Gy14) v1carcgyB0996
Carg19181CmaCh20G006370Cucurbita maxima (Rimu)carcmaB1215
Carg19181CmaCh11G018410Cucurbita maxima (Rimu)carcmaB1211
Carg19181CmoCh20G006090Cucurbita moschata (Rifu)carcmoB1184
Carg19181CmoCh19G009590Cucurbita moschata (Rifu)carcmoB1183
Carg19181CmoCh11G019140Cucurbita moschata (Rifu)carcmoB1179
Carg19181Lsi10G001570Bottle gourd (USVL1VR-Ls)carlsiB793
Carg19181Lsi11G014730Bottle gourd (USVL1VR-Ls)carlsiB795
Carg19181Cp4.1LG04g03390Cucurbita pepo (Zucchini)carcpeB1223
Carg19181Cp4.1LG16g04540Cucurbita pepo (Zucchini)carcpeB1221
Carg19181Cp4.1LG15g07580Cucurbita pepo (Zucchini)carcpeB1220
Carg19181CsGy7G003550Cucumber (Gy14) v2carcgybB0864
Carg19181MELO3C018801.2Melon (DHL92) v3.6.1carmedB0874
Carg19181CsaV3_7G003780Cucumber (Chinese Long) v3carcucB0915
Carg19181CsaV3_2G035230Cucumber (Chinese Long) v3carcucB0913
Carg19181Cla97C02G028150Watermelon (97103) v2carwmbB0915
Carg19181Cla97C02G035010Watermelon (97103) v2carwmbB0916
Carg19181Bhi05G001156Wax gourdcarwgoB1022
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg19181Carg03147Silver-seed gourdcarcarB364
Carg19181Carg19083Silver-seed gourdcarcarB590
The following block(s) are covering this gene:
GeneOrganismBlock
Carg19181Cucurbita pepo (Zucchini)carcpeB1219
Carg19181Silver-seed gourdcarcarB036
Carg19181Silver-seed gourdcarcarB562
Carg19181Silver-seed gourdcarcarB637
Carg19181Cucumber (Gy14) v2carcgybB0862
Carg19181Cucumber (Gy14) v2carcgybB0863
Carg19181Cucumber (Gy14) v1carcgyB0995
Carg19181Cucurbita maxima (Rimu)carcmaB1213
Carg19181Cucurbita maxima (Rimu)carcmaB1214
Carg19181Cucurbita maxima (Rimu)carcmaB1216
Carg19181Cucurbita maxima (Rimu)carcmaB1217
Carg19181Cucurbita maxima (Rimu)carcmaB1218
Carg19181Cucurbita moschata (Rifu)carcmoB1181
Carg19181Cucurbita moschata (Rifu)carcmoB1182
Carg19181Cucurbita moschata (Rifu)carcmoB1185
Carg19181Cucurbita moschata (Rifu)carcmoB1186
Carg19181Cucurbita moschata (Rifu)carcmoB1187
Carg19181Cucurbita pepo (Zucchini)carcpeB1218
Carg19181Cucurbita pepo (Zucchini)carcpeB1222
Carg19181Cucurbita pepo (Zucchini)carcpeB1225
Carg19181Wild cucumber (PI 183967)carcpiB0908
Carg19181Wild cucumber (PI 183967)carcpiB0910
Carg19181Cucumber (Chinese Long) v2carcuB0888
Carg19181Cucumber (Chinese Long) v2carcuB0890
Carg19181Cucumber (Chinese Long) v3carcucB0912
Carg19181Cucumber (Chinese Long) v3carcucB0914
Carg19181Bottle gourd (USVL1VR-Ls)carlsiB797
Carg19181Bottle gourd (USVL1VR-Ls)carlsiB798
Carg19181Melon (DHL92) v3.5.1carmeB0866
Carg19181Melon (DHL92) v3.6.1carmedB0875
Carg19181Watermelon (Charleston Gray)carwcgB0849
Carg19181Watermelon (Charleston Gray)carwcgB0853
Carg19181Watermelon (97103) v1carwmB0876
Carg19181Watermelon (97103) v1carwmB0879
Carg19181Watermelon (97103) v2carwmbB0912
Carg19181Wax gourdcarwgoB1024
Carg19181Wax gourdcarwgoB1026