Csa2G338850 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G338850
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Putative uncharacterized protein At4g33480/F17M5_240
Location	Chr2 : 15339865 .. 15342020 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAAAATACTCAAACTTCAAATAATTTGCATTCTCGAATGATGTATTGTGATTTAGACTAGACGGTTCTCTAGAAATACAGTCAGCCGAGCCGCCTAACTTCCGAGAAGAGCAAGCATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGCTACCGCTCCTTCCCTATCTCAAACATATTTCAGTCTCAGTCGCCGCCGGCCTTCCAATTTCATCCACTTTCTTAATTTAAGCCTTCCCAACCGCCCACCACGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTACCCATATCGAAGTTGTGGATGATTTTAGCTTCGATGACGCTGGACCCTCTAGCTCCACTTCCAATTCCACTTATTCGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGTTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTAACATTTCTTTCTCAGTTCCCTCGTGGAGGATTATTTAAAATTTGTATCATTTTAGTGCTTCCCTGTTCACCTAACCACTAGTGCCTTTTGATTTTCATGTATGAACGAGAAGTTCAGTTTACGTTGATAATGAATACATCTGTAATTTATAGGCACTCTCAGTTACTGAATCTAAACTAATCAAACTAAAAGTATGCAGTTAATAAATTTTTCTTATTTACGTTCATCCCGTTTTCCTCTTTACAGCTGGTTTTCTCATTATTCATGGGTTGTTTTATGTATTTGGGTTTGCTAACCTTTGATCAATTCTACTGCCACAAGTGTATGACTGGTTTTTTCATGTATTCAGTTTATTGGTCTAGCTTTCTTTCATAGATATAATGAAAAGATACTGATTCTCGGAAAAATAGAAGAGACGGTCACCAGTGATTTAATACAGTATATAATCTCCAGTTGGAGTATTCTTTCCTGGTTCTTTTCTTGTAATTATACTATCAGATCAACCTCAATTGGGGAATCGCCTTCCCCTAGCCTTAGGGAGTGATTTATTATTATTATGATTATTTTACGAATCCTGCTTGTCCTTATCAAAGAAAGGAAATTATATCATTTACTAAATCCTTTACAATTTTTATTATTGTTACAGCTGTTCTTGTATTTGTGACTTAATTAAATTCTTACTTTTTTTTTCTTTTCTTTTTGATTTTGCATCTTCAATCTTTTAATTTGACAGGTCGATCCTTTGAACAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCGGTGGACACGTGAGTGTTGTTTGTTGCTACCAGATCATTATGCTATAGCCTCGACACTTCGAAAGTTTGACCTTTTTTTGATATTATTTACCTCAAAATTGCTGCAGGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTGTATGCTTTCTTTTCATATGGTTAACTTCCTCGCTAGTTTGAGTTTGTTCATGAACTTGAGTGCGGATGGTTTTACAATATTTAATTCACATCACGAAACTTTTATATTTCACATTTCTGTATGCTTATAAGTAAGAAGTTCATGCATGTATTGTTCATTTGTTTGTCCCTTTTACCATATTTGTTCTACTTTTTTTGAAAAGGAAACAAGTCTCTTTATTCTTACAGATGTCATATGAAAGGGACTAATGTTCTAAGTACATGAGGGTTATACAAAAAGCATAAAGCATAACTAGGATCAGTAGGCGCACCTAAACATCTCAACTAGGTTGACACCTCCTTAGTGCCCTCATCGTATCTTTAAAACATAACATCAAAAATTGGCTGAGGCTTAAAAATTCGGCCATTACAGATAGGACAAAAAGACTATTGATCACTAGTCTTACAAAGGATTTAACAAAAAGCATGCAGAAGGCTTGAGACAAAAGTTTAAACCAAAAATTAAGCTGAGAAGATAAAAGCTCTCCAATTTGAGTAGATTTCTTGAATGTTGTAGCTTTCAAAAGCCTTGGAGAAGGAACACCACGAGAAGACATTCTTACGAGTCAAAAAGATGGTTGATCACTAG

mRNA sequence

ATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGCTACCGCTCCTTCCCTATCTCAAACATATTTCAGTCTCAGTCGCCGCCGGCCTTCCAATTTCATCCACTTTCTTAATTTAAGCCTTCCCAACCGCCCACCACGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTACCCATATCGAAGTTGTGGATGATTTTAGCTTCGATGACGCTGGACCCTCTAGCTCCACTTCCAATTCCACTTATTCGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGTTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTGAACAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCGGTGGACACGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTCTTTCAAAAGCCTTGGAGAAGGAACACCACGAGAAGACATTCTTACGAGTCAAAAAGATGGTTGATCACTAG

Coding sequence (CDS)

ATGGCGTTGTGTATCTCTATTCCTTCCTTCTCCGATTCTGCTACCGCTCCTTCCCTATCTCAAACATATTTCAGTCTCAGTCGCCGCCGGCCTTCCAATTTCATCCACTTTCTTAATTTAAGCCTTCCCAACCGCCCACCACGTCTTTGCCGAGCTTCCAATTCTCAGCCTGGACCGTTCCCCAAACAGTCTGCTTCTGCTTCTTCTAAGAAAAGGAAGAAAAAGGATAAGGGAGATTCCAAGGTTTTTAATCCTACCCATATCGAAGTTGTGGATGATTTTAGCTTCGATGACGCTGGACCCTCTAGCTCCACTTCCAATTCCACTTATTCGTCGTACCATCCTTCGACCTTGCCCAAACCGCCAGCTGGTTTTGTACTAGACGACCATGGAAAGGTCCTCATGGCTTCAAACAAGCGAATTGCTACCATGGTCGATCCTTTGAACAATTTGCCTCTGGAATGCGTTATAAGAAGAATTTTTAGAAGTTCAAAAGGGGATGATTGCATGCTTCTTTGCCCGGTGGACACGCCTGTTCAAATACTAAAGAGCAAGAATATTGATGGATGGTCAGCTCTTTCAAAAGCCTTGGAGAAGGAACACCACGAGAAGACATTCTTACGAGTCAAAAAGATGGTTGATCACTAG

Protein sequence

MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPFPKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH*

Homology

[Close]

BLAST of Csa2G338850 vs. TrEMBL
Match: A0A0A0LQF4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338850 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 5.3e-120
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60
           MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 216
           ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH
Sbjct: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 215

[Close]

BLAST of Csa2G338850 vs. TrEMBL
Match: M5WG33_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008276mg PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 1.0e-46
Identity = 106/202 (52.48%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 9   SFSDSATAPSLSQTYFSLSRRRPSNFIHF-----LNLSLP---NRPPRL----CRASNSQ 68
           +FS S T  + S  +   +   P    HF     L++S P   + P RL    C A+ SQ
Sbjct: 2   AFSVSTTPSTTSSLHLKQAHYFPLFTFHFNQLFPLSVSFPTPSSTPTRLHISVCAAAKSQ 61

Query: 69  PGPFPKQSASASSKKRKKKDKG----DSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSS 128
            GP  K+S S ++  +KKK KG    DS+  + + +E+VD+      G S S S+S    
Sbjct: 62  TGPVKKRSPSGTNNNKKKKRKGGGGGDSEDLSLSDVEIVDNLGAGGVGSSGSGSSSRSLG 121

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           +HP+ LPKPPAGFV+DDHGKVLMAS+KRIA++VDP NN PLECVIRR+FRSS+GD+CMLL
Sbjct: 122 FHPTPLPKPPAGFVVDDHGKVLMASSKRIASIVDPTNNFPLECVIRRVFRSSRGDECMLL 181

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 182 CPVDTPVQILKSTNIDGWSAVS 203

[Close]

BLAST of Csa2G338850 vs. TrEMBL
Match: A0A061DJE6_THECC (BTB/POZ domain-containing protein TNFAIP1 isoform 1 OS=Theobroma cacao GN=TCM_001583 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.6e-42
Identity = 110/202 (54.46%), Postives = 136/202 (67.33%), Query Frame = 1


Query: 9   SFSDSATAPSLSQTY--------FSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPG-P 68
           S S ++T PS S +Y        F +S R  SN     +  LP     LC A+ SQ G P
Sbjct: 4   SISLTSTPPSTSPSYHHKNPFPSFPVSIRISSN--SSASALLP-----LCFAAKSQTGGP 63

Query: 69  FPKQSAS-ASSKKRKKKDKGDS---KVFNPTHIEVVDDFSFDDAGPSSSTSNSTYS---S 128
             K+S+S A +KKR+K   GD    K  +   +E+V++   DD G SSS+S++T +   +
Sbjct: 64  VKKRSSSVAGNKKRRKGRSGDDDNLKELSLRDVEIVEENVDDDEGSSSSSSSTTATHALA 123

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           YHP  LPKPPAGFV+DD G+VLMASNKRIATMVD  NN PLECVIRR+F SS+GD+CMLL
Sbjct: 124 YHPPPLPKPPAGFVVDDTGRVLMASNKRIATMVDSANNNPLECVIRRVFESSRGDECMLL 183

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 184 CPVDTPVQILKSTNIDGWSAVS 198

[Close]

BLAST of Csa2G338850 vs. TrEMBL
Match: A0A061DKW6_THECC (BTB/POZ domain-containing protein TNFAIP1 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_001583 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 7.5e-42
Identity = 108/198 (54.55%), Postives = 134/198 (67.68%), Query Frame = 1


Query: 13  SATAPSLSQTY--------FSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPG-PFPKQ 72
           ++T PS S +Y        F +S R  SN     +  LP     LC A+ SQ G P  K+
Sbjct: 1   TSTPPSTSPSYHHKNPFPSFPVSIRISSN--SSASALLP-----LCFAAKSQTGGPVKKR 60

Query: 73  SAS-ASSKKRKKKDKGDS---KVFNPTHIEVVDDFSFDDAGPSSSTSNSTYS---SYHPS 132
           S+S A +KKR+K   GD    K  +   +E+V++   DD G SSS+S++T +   +YHP 
Sbjct: 61  SSSVAGNKKRRKGRSGDDDNLKELSLRDVEIVEENVDDDEGSSSSSSSTTATHALAYHPP 120

Query: 133 TLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVD 192
            LPKPPAGFV+DD G+VLMASNKRIATMVD  NN PLECVIRR+F SS+GD+CMLLCPVD
Sbjct: 121 PLPKPPAGFVVDDTGRVLMASNKRIATMVDSANNNPLECVIRRVFESSRGDECMLLCPVD 180

Query: 193 TPVQILKSKNIDGWSALS 195
           TPVQILKS NIDGWSA+S
Sbjct: 181 TPVQILKSTNIDGWSAVS 191

[Close]

BLAST of Csa2G338850 vs. TrEMBL
Match: A0A059AJW1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00111 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-41
Identity = 93/166 (56.02%), Postives = 115/166 (69.28%), Query Frame = 1


Query: 37  FLNLSLPNRPPR--------LCRASNSQPGPFPKQSASASSKKRKKKDKGDSKVFNPTHI 96
           FL+L+ P RP R        LCRAS SQ  P  K+  S + K++KK  K D    +   +
Sbjct: 33  FLSLAAP-RPRRRDAASGLLLCRASKSQGNPVRKRQPSGAGKRKKKPAKEDGAARD---V 92

Query: 97  EVVDDFSFDDA-GPSSSTSNSTYSSYHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDP 156
           E+VDDF   +  G  S    ++ + YHP+ LPKPPAGFV+DD G+V+MAS+KR+ T+VDP
Sbjct: 93  EIVDDFVIGEGEGEGSGGLGASSAGYHPTPLPKPPAGFVVDDQGRVVMASHKRLVTIVDP 152

Query: 157 LNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQILKSKNIDGWSAL 194
            NN PLECVIRRIFRSS GD+CMLLCP DTPVQILKS NIDGWSA+
Sbjct: 153 TNNFPLECVIRRIFRSSSGDECMLLCPADTPVQILKSTNIDGWSAV 194

[Close]

BLAST of Csa2G338850 vs. TAIR10
Match: AT4G33480.1 (AT4G33480.1 unknown protein)

HSP 1 Score: 161.4 bits (407), Expect = 6.3e-40
Identity = 97/199 (48.74%), Postives = 124/199 (62.31%), Query Frame = 1


Query: 9   SFSDSATAPSLSQTYFSLSRRR----PSNFIHFLNLSLPNRPPRL----CRASNSQPGPF 68
           +FS S T+PS + T    S  +     S+F   L++S P     L      A N Q G  
Sbjct: 2   AFSYSLTSPSPNSTLSYSSTHQFLNPSSSFPVSLSVSSPKNTRHLRLLITSALNPQTGQP 61

Query: 69  PKQSA-----SASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHP 128
            K+++     S+++KKRKKK K    V +    +  D F  DD    SS+S+S  +   P
Sbjct: 62  TKKASTGSDKSSTNKKRKKKGKIAKPVEDWELRDSEDAFEEDDDADYSSSSSSLATFNSP 121

Query: 129 STLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPV 188
            T+PKPPAGFV+++ G+VLMAS KRI T++DP NN PL+CVIRR+F SSKG+DCMLLCPV
Sbjct: 122 PTIPKPPAGFVINETGRVLMASKKRITTVIDPTNNSPLDCVIRRVFTSSKGEDCMLLCPV 181

Query: 189 DTPVQILKSKNIDGWSALS 195
           DTPVQILKS NIDGWSA+S
Sbjct: 182 DTPVQILKSTNIDGWSAVS 200

[Close]

BLAST of Csa2G338850 vs. NCBI nr
Match: gi|700207122|gb|KGN62241.1| (hypothetical protein Csa_2G338850 [Cucumis sativus])

HSP 1 Score: 438.3 bits (1126), Expect = 7.6e-120
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60
           MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 216
           ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH
Sbjct: 181 ILKSKNIDGWSALSKALEKEHHEKTFLRVKKMVDH 215

[Close]

BLAST of Csa2G338850 vs. NCBI nr
Match: gi|778670353|ref|XP_011649451.1| (PREDICTED: uncharacterized protein LOC101207357 isoform X1 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60
           MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of Csa2G338850 vs. NCBI nr
Match: gi|778670355|ref|XP_011649452.1| (PREDICTED: uncharacterized protein LOC101207357 isoform X2 [Cucumis sativus])

HSP 1 Score: 394.4 bits (1012), Expect = 1.3e-106
Identity = 193/194 (99.48%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60
           MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of Csa2G338850 vs. NCBI nr
Match: gi|659121815|ref|XP_008460828.1| (PREDICTED: uncharacterized protein LOC103499586 [Cucumis melo])

HSP 1 Score: 379.0 bits (972), Expect = 5.4e-102
Identity = 186/194 (95.88%), Postives = 188/194 (96.91%), Query Frame = 1


Query: 1   MALCISIPSFSDSATAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPRLCRASNSQPGPF 60
           MALCISIPSFSDS TAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPP LCRASNSQPGPF
Sbjct: 1   MALCISIPSFSDSVTAPSLSQTYFSLSRRRPSNFIHFLNLSLPNRPPCLCRASNSQPGPF 60

Query: 61  PKQSASASSKKRKKKDKGDSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSSYHPSTLPK 120
           PKQSASASSKKRKKKDKGDSKVFNP + EVVDDFSFDDAGPSSSTS STY SYHPSTLPK
Sbjct: 61  PKQSASASSKKRKKKDKGDSKVFNPNNFEVVDDFSFDDAGPSSSTSTSTYLSYHPSTLPK 120

Query: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180
           PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ
Sbjct: 121 PPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLLCPVDTPVQ 180

Query: 181 ILKSKNIDGWSALS 195
           ILKSKNIDGWSA+S
Sbjct: 181 ILKSKNIDGWSAVS 194

[Close]

BLAST of Csa2G338850 vs. NCBI nr
Match: gi|595863297|ref|XP_007211558.1| (hypothetical protein PRUPE_ppa008276mg [Prunus persica])

HSP 1 Score: 194.9 bits (494), Expect = 1.5e-46
Identity = 106/202 (52.48%), Postives = 135/202 (66.83%), Query Frame = 1


Query: 9   SFSDSATAPSLSQTYFSLSRRRPSNFIHF-----LNLSLP---NRPPRL----CRASNSQ 68
           +FS S T  + S  +   +   P    HF     L++S P   + P RL    C A+ SQ
Sbjct: 2   AFSVSTTPSTTSSLHLKQAHYFPLFTFHFNQLFPLSVSFPTPSSTPTRLHISVCAAAKSQ 61

Query: 69  PGPFPKQSASASSKKRKKKDKG----DSKVFNPTHIEVVDDFSFDDAGPSSSTSNSTYSS 128
            GP  K+S S ++  +KKK KG    DS+  + + +E+VD+      G S S S+S    
Sbjct: 62  TGPVKKRSPSGTNNNKKKKRKGGGGGDSEDLSLSDVEIVDNLGAGGVGSSGSGSSSRSLG 121

Query: 129 YHPSTLPKPPAGFVLDDHGKVLMASNKRIATMVDPLNNLPLECVIRRIFRSSKGDDCMLL 188
           +HP+ LPKPPAGFV+DDHGKVLMAS+KRIA++VDP NN PLECVIRR+FRSS+GD+CMLL
Sbjct: 122 FHPTPLPKPPAGFVVDDHGKVLMASSKRIASIVDPTNNFPLECVIRRVFRSSRGDECMLL 181

Query: 189 CPVDTPVQILKSKNIDGWSALS 195
           CPVDTPVQILKS NIDGWSA+S
Sbjct: 182 CPVDTPVQILKSTNIDGWSAVS 203

The following BLAST results are available for this feature:

BLAST of Csa2G338850 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQF4_CUCSA	5.3e-120	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338850 PE=4 SV=1	[more]
M5WG33_PRUPE	1.0e-46	52.48	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008276mg PE=4 SV=1	[more]
A0A061DJE6_THECC	2.6e-42	54.46	BTB/POZ domain-containing protein TNFAIP1 isoform 1 OS=Theobroma cacao GN=TCM_00...	[more]
A0A061DKW6_THECC	7.5e-42	54.55	BTB/POZ domain-containing protein TNFAIP1 isoform 2 (Fragment) OS=Theobroma caca...	[more]
A0A059AJW1_EUCGR	2.2e-41	56.02	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I00111 PE=4 SV=1	[more]

BLAST of Csa2G338850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33480.1	6.3e-40	48.74	unknown protein	[more]

BLAST of Csa2G338850 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700207122\|gb\|KGN62241.1\|	7.6e-120	100.00	hypothetical protein Csa_2G338850 [Cucumis sativus]	[more]
gi\|778670353\|ref\|XP_011649451.1\|	1.3e-106	99.48	PREDICTED: uncharacterized protein LOC101207357 isoform X1 [Cucumis sativus]	[more]
gi\|778670355\|ref\|XP_011649452.1\|	1.3e-106	99.48	PREDICTED: uncharacterized protein LOC101207357 isoform X2 [Cucumis sativus]	[more]
gi\|659121815\|ref\|XP_008460828.1\|	5.4e-102	95.88	PREDICTED: uncharacterized protein LOC103499586 [Cucumis melo]	[more]
gi\|595863297\|ref\|XP_007211558.1\|	1.5e-46	52.48	hypothetical protein PRUPE_ppa008276mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU094969	cucumber EST collection version 3.0	transcribed_cluster
CU097430	cucumber EST collection version 3.0	transcribed_cluster
CU149775	cucumber EST collection version 3.0	transcribed_cluster
CU160554	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G338850.1	Csa2G338850.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU094969	CU094969	transcribed_cluster
CU097430	CU097430	transcribed_cluster
CU160554	CU160554	transcribed_cluster
CU149775	CU149775	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36061	FAMILY NOT NAMED	coord: 41..194 score: 2.7
None	No IPR available	PANTHER	PTHR36061:SF2	SUBFAMILY NOT NAMED	coord: 41..194 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G338850	Cla007851	Watermelon (97103) v1	cuwmB152
Csa2G338850	MELO3C023197	Melon (DHL92) v3.5.1	cumeB095
Csa2G338850	ClCG02G000090	Watermelon (Charleston Gray)	cuwcgB120
Csa2G338850	Lsi10G007820	Bottle gourd (USVL1VR-Ls)	culsiB097
Csa2G338850	MELO3C023197.2	Melon (DHL92) v3.6.1	cumedB085
Csa2G338850	Cla97C02G026300	Watermelon (97103) v2	cuwmbB117
Csa2G338850	Bhi10G001388	Wax gourd	cuwgoB184
Csa2G338850	CSPI02G16540	Wild cucumber (PI 183967)	cpicuB065
Csa2G338850	Cucsa.228070	Cucumber (Gy14) v1	cgycuB324
Csa2G338850	CmoCh20G010290	Cucurbita moschata (Rifu)	cmocuB535
Csa2G338850	Cp4.1LG16g01200	Cucurbita pepo (Zucchini)	cpecuB271
Csa2G338850	CsGy2G016130	Cucumber (Gy14) v2	cgybcuB058

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G338850	Cucurbita maxima (Rimu)	cmacuB545