Csa2G285290 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G285290
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRed chlorophyll catabolite reductase; contains IPR009439 (Red chlorophyll catabolite reductase)
LocationChr2 : 13419423 .. 13421676 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGCTTAGGAGATAATCCAAAATGGGTTTATTAGCTGTGAACCTCATTTCATCTGCTTCTTGTTTTGTTCCTCACTCGCCGCTGCGTTTCCAAGCAAAAAGAAGTAGCCAACCAGTACTTAAGGCGGCGTTTCAGTCATCAGAGAAGATGGATAGTGGTGGGCAGGTGGCGCCTGTGTCGAAGCTGATGGAGTTTCCACATCTGACGGCTTCGCATAGAGATCTGATGGTGGATCTAATCGAAACCGTTGAGAATGGGTTAGGAGATCATCTTCTTCCATCGACGGTTCCGACAGATGTGGAGTATTATGAGAATCAAAACGGCACTTCACAGGGCACTCTTCTCATTCGTTCTGCTCTTCCATCTTCTCCCGTAAACTCATTTCTCTCTATACCTTCGGAAATTGGCAAAACTAGTTGGTTTTTACTTTTCCCAATTTCCACCTTCTTTTTTTTTGCCATTCAAAAAACTCATTTTTGTTTAACTTACATATACTTCAATTTTTGTTTTCAAAATAACTCATTTTTAAAATTAAACATGTAATCCAAAAATTATTATTGTTTTGGTCCACATAGTTATGAACTTTAACTTCCAATCCTGGATCGACACCATCACTTTGGCACTTCGTTTGATTCCGAAAGTTTGTGGGTTCACTGCTGAAAATATAATTTTATGCTCTATTAACTTCTTGTGTGTTGTTGCTACTAGGTACATAAGTATACAAGTAGTAGTAATTAAGTTATGAACTTTAGTGTATGTGCCTTGCTTAAGGACTCTAGAAATAGGAGTATGAGAAAGTAGTCATGTAGTCTCTGTATGGTCTAAGAAGTTGGAGTTTAGGGGATTACAGAGTCTTTTTTTTTCTAATTCATTGGTTCAAACACCACCTTGAGTATGGAATCGGAAAAGCAAACTTTGTTATGCTTGCCCAATTGGTGTCTTTGCCAATAGTCAAAATGGCATCATGAATGTTTTTTTTTTTTTTTTTTTATGAATTTTGATATGGAGAAATATAAATGTTAAGATCATTTTAAATTAGGTTCACCTAAGTAAAAAAAAATAAAAAAAAATTAATGATATATGCACCATTAGACAATTTTTAATTGGGTGAGTTTCCATTTCGTTATTCCATTTTTAGAGTGTAAGAAAAAAATTACAACAGTAGAGTAGAGGATTCAAAATTTATGAGTTGTGTTCTTTTTCTTTCTTATGTAAGTTTACAATATGATCAACTCTTTTATTCAACTTGAAAACAACTCATATAAAGTTTAGAATTTGGTTATTGAAGTTTCATTTGATTATTTCATTTTTTTCAGATTGATTTTATGATAGCAAGTTGGTTGCACTTGAAGCAGCCACAAGGTGGTGCATTCAACATAACCAACATTGCTGGCTACTTGAAACCCTCAAATGACATTCCTCATTTTCAATTCGAGTTGGTTCAATGTAGCCCTACCTTTCTCATCTTCTTTCTTGACTTGCTTCCTCGAACCGATATCATCCTCCGCCCCGACTACCTTACCACCTACTACGAGGACACTGGGCTCGAGAAGCTTCGACAACGACTTGCCGCCTTGCCAGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGTAAAGTCGTTTCGTCTACGGGAATTCTGGTGGGTGTGAAGTGCCAGGAGAGCGAGTCCAAGCGAGTGGAAGAGATTATTCAGGAGGAGATCGGTCCAATCTCGAAGGAGGTAATGAGGATATGGATGGAGTTGTGCTTGAATAATGGAGGAAGAGAGCTTGAAGAAGATGAAAGGAGTTTGATGGAGAAGAGAGATCTTATGATAAAGAAGAAGGCGATTGAGATGGATTTGAGCAAAACCATGCCTTTGCAATTTGGAGAAGAAGTTGCAAATAGAGTTCTTCAAGTTATTAGAAGTGCTTTCAAAACTGCTTAATGTTTGATTATCTTCAAGTTATGTACCTACTTTGTTTTGACACCATCTTTTCAGCACGAGTATCTAGTACACACTATCAGTACAAAACTTCTTAGTTACAATAGATTATATATGATGAGTTCATATTGACATAATTTGATCAATAATATCACAAATAATCGAAGAATTTACAAAGCAATATATAGAAAACTCAACTTACATAACATGAAATAAAATATACATAAAATTTCAAATCAAGAAGCTACCTAAAAGAAATAAGGATAGTGGCGATGGTACCGATTTGTCGATGAGAGAAAGAAGCGAGACGAAGAACAGT

mRNA sequence

ATGGGTTTATTAGCTGTGAACCTCATTTCATCTGCTTCTTGTTTTGTTCCTCACTCGCCGCTGCGTTTCCAAGCAAAAAGAAGTAGCCAACCAGTACTTAAGGCGGCGTTTCAGTCATCAGAGAAGATGGATAGTGGTGGGCAGGTGGCGCCTGTGTCGAAGCTGATGGAGTTTCCACATCTGACGGCTTCGCATAGAGATCTGATGGTGGATCTAATCGAAACCGTTGAGAATGGGTTAGGAGATCATCTTCTTCCATCGACGGTTCCGACAGATGTGGAGTATTATGAGAATCAAAACGGCACTTCACAGGGCACTCTTCTCATTCGTTCTGCTCTTCCATCTTCTCCCATTGATTTTATGATAGCAAGTTGGTTGCACTTGAAGCAGCCACAAGGTGGTGCATTCAACATAACCAACATTGCTGGCTACTTGAAACCCTCAAATGACATTCCTCATTTTCAATTCGAGTTGGTTCAATGTAGCCCTACCTTTCTCATCTTCTTTCTTGACTTGCTTCCTCGAACCGATATCATCCTCCGCCCCGACTACCTTACCACCTACTACGAGGACACTGGGCTCGAGAAGCTTCGACAACGACTTGCCGCCTTGCCAGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGTAAAGTCGTTTCGTCTACGGGAATTCTGGTGGGTGTGAAGTGCCAGGAGAGCGAGTCCAAGCGAGTGGAAGAGATTATTCAGGAGGAGATCGGTCCAATCTCGAAGGAGGTAATGAGGATATGGATGGAGTTGTGCTTGAATAATGGAGGAAGAGAGCTTGAAGAAGATGAAAGGAGTTTGATGGAGAAGAGAGATCTTATGATAAAGAAGAAGGCGATTGAGATGGATTTGAGCAAAACCATGCCTTTGCAATTTGGAGAAGAAGTTGCAAATAGAGTTCTTCAAGTTATTAGAAGTGCTTTCAAAACTGCTTAA

Coding sequence (CDS)

ATGGGTTTATTAGCTGTGAACCTCATTTCATCTGCTTCTTGTTTTGTTCCTCACTCGCCGCTGCGTTTCCAAGCAAAAAGAAGTAGCCAACCAGTACTTAAGGCGGCGTTTCAGTCATCAGAGAAGATGGATAGTGGTGGGCAGGTGGCGCCTGTGTCGAAGCTGATGGAGTTTCCACATCTGACGGCTTCGCATAGAGATCTGATGGTGGATCTAATCGAAACCGTTGAGAATGGGTTAGGAGATCATCTTCTTCCATCGACGGTTCCGACAGATGTGGAGTATTATGAGAATCAAAACGGCACTTCACAGGGCACTCTTCTCATTCGTTCTGCTCTTCCATCTTCTCCCATTGATTTTATGATAGCAAGTTGGTTGCACTTGAAGCAGCCACAAGGTGGTGCATTCAACATAACCAACATTGCTGGCTACTTGAAACCCTCAAATGACATTCCTCATTTTCAATTCGAGTTGGTTCAATGTAGCCCTACCTTTCTCATCTTCTTTCTTGACTTGCTTCCTCGAACCGATATCATCCTCCGCCCCGACTACCTTACCACCTACTACGAGGACACTGGGCTCGAGAAGCTTCGACAACGACTTGCCGCCTTGCCAGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGTAAAGTCGTTTCGTCTACGGGAATTCTGGTGGGTGTGAAGTGCCAGGAGAGCGAGTCCAAGCGAGTGGAAGAGATTATTCAGGAGGAGATCGGTCCAATCTCGAAGGAGGTAATGAGGATATGGATGGAGTTGTGCTTGAATAATGGAGGAAGAGAGCTTGAAGAAGATGAAAGGAGTTTGATGGAGAAGAGAGATCTTATGATAAAGAAGAAGGCGATTGAGATGGATTTGAGCAAAACCATGCCTTTGCAATTTGGAGAAGAAGTTGCAAATAGAGTTCTTCAAGTTATTAGAAGTGCTTTCAAAACTGCTTAA

Protein sequence

MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPHLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEVANRVLQVIRSAFKTA*
Homology
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BLAST of Csa2G285290 vs. Swiss-Prot
Match: RCCR_ARATH (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=RCCR PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 3.3e-63
Identity = 133/322 (41.30%), Postives = 195/322 (60.56%), Query Frame = 1 

Query: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVL-KAAFQSSEKMDSGGQVAPVSKLMEFP 60
           M ++  N + S+S     SPL  +  R S+ +  +A FQS E  D   +     K MEFP
Sbjct: 1   MAMIFCNTLYSSSSPSYLSPLTSKPSRFSKNLRPRAQFQSMEDHDDHLR----RKFMEFP 60

Query: 61  HLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPID 120
           +++ + + LMVDL+ TVEN L   LLP  +P DV  + N NG+++ +L IRS   SSPID
Sbjct: 61  YVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGDKSSPID 120

Query: 121 FMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDII 180
           F+I SW+H K P G + NIT+I+G+L  S   P+F  EL+Q S   L+  LDL  R D++
Sbjct: 121 FVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLV 180

Query: 181 LRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKR 240
           L PDYL  YY+DT L+  RQ L  LPEV+PY S SL+ R   S T  ++ +  +E +  +
Sbjct: 181 LNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEED--K 240

Query: 241 VEEIIQEEIGPISKEVMRIWMELCLNNGGREL--EEDERSLMEKRDLMIKKKAIEMDLSK 300
           +EEI+++ + P +KEV+ +W+E C+     ++   E+ER  +E+RD   ++K+IE DL  
Sbjct: 241 LEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDL 300

Query: 301 TMPLQFGEEVANRVLQVIRSAF 320
             P  FGEEV++RV+  I+ AF
Sbjct: 301 QFPRMFGEEVSSRVVHAIKEAF 316

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BLAST of Csa2G285290 vs. Swiss-Prot
Match: RCCR_HORVU (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-40
Identity = 82/202 (40.59%), Postives = 122/202 (60.40%), Query Frame = 1 

Query: 118 IDFMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTD 177
           IDFM+ S LH K P G A +IT++   L  S D PHF  E +Q SPT ++  LDLLPR D
Sbjct: 1   IDFMLQSSLHCKVPNG-AIDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 60

Query: 178 IILRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESES 237
           + L P+Y+  YYEDT ++K R+ +  LP+  PY S SL+ R   S T +   + C +   
Sbjct: 61  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGE 120

Query: 238 KRVEEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSK 297
             +EEI+   +  + K +++IW++ C ++   E+EE ER +M KRD  ++ K+IE+DL+ 
Sbjct: 121 GTLEEIVHGHLASVVKGILQIWLDTCASDAS-EMEEGEREIMVKRDRTVRSKSIEVDLTA 180

Query: 298 TMPLQFGEEVANRVLQVIRSAF 320
            +P  FG +V+ R++  IR AF
Sbjct: 181 NLPRMFGPDVSGRIIAEIRKAF 200

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BLAST of Csa2G285290 vs. TrEMBL
Match: A0A0A0LLX2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285290 PE=4 SV=1)

HSP 1 Score: 636.0 bits (1639), Expect = 2.6e-179
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1 

Query: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH 60
           MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH
Sbjct: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH 60

Query: 61  LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF 120
           LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF
Sbjct: 61  LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF 120

Query: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180
           MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL
Sbjct: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180

Query: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240
           RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV
Sbjct: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240

Query: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300
           EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP
Sbjct: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300

Query: 301 LQFGEEVANRVLQVIRSAFKTA 323
           LQFGEEVANRVLQVIRSAFKTA
Sbjct: 301 LQFGEEVANRVLQVIRSAFKTA 322

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BLAST of Csa2G285290 vs. TrEMBL
Match: Q1ELT6_CITLA (Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus GN=rccr PE=2 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 3.3e-150
Identity = 274/315 (86.98%), Postives = 294/315 (93.33%), Query Frame = 1 

Query: 8   LISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPHLTASHRD 67
           L+S A  FVP  PLRFQ K SS+ VLKAA  SSEKM SGG+ A  SKLMEFPHLTA+HRD
Sbjct: 1   LVSRACYFVPLPPLRFQTKSSSRRVLKAALPSSEKMRSGGRGAAESKLMEFPHLTAAHRD 60

Query: 68  LMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLH 127
           LMVDLI+ VENG+G+HLLPSTVP DVEYYENQ+GTSQGTLLIRSAL SSPIDFMIASWLH
Sbjct: 61  LMVDLIQGVENGVGEHLLPSTVPPDVEYYENQSGTSQGTLLIRSALQSSPIDFMIASWLH 120

Query: 128 LKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTT 187
           L+QPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDI+LRPDYL T
Sbjct: 121 LEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVLRPDYLVT 180

Query: 188 YYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEE 247
           YYE+TGLEK RQ+LAALPEVSPYFSSSLYFRKVVSSTGILV VKC+ES+S+RVEEI++EE
Sbjct: 181 YYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERVEEIVREE 240

Query: 248 IGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV 307
           IGPISKEVMRIWMELC+ NGGRE+EE+ERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV
Sbjct: 241 IGPISKEVMRIWMELCM-NGGREIEEEERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV 300

Query: 308 ANRVLQVIRSAFKTA 323
           ANRVLQVIRSAFKTA
Sbjct: 301 ANRVLQVIRSAFKTA 314

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BLAST of Csa2G285290 vs. TrEMBL
Match: C6L812_CUCSA (Putative red chlorophyll catabolite reductase (Fragment) OS=Cucumis sativus GN=CsRCCR PE=2 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 3.2e-113
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 1 

Query: 88  TVPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 147
           TVP DVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP
Sbjct: 1   TVPPDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 60

Query: 148 SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 207
           SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV
Sbjct: 61  SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 120

Query: 208 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 267
           SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG
Sbjct: 121 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 180

Query: 268 GRELEEDERSLMEKRDLMIKKKAIEMDLS 297
           GRELEEDERSLMEKRDLMIKKKAIEMDLS
Sbjct: 181 GRELEEDERSLMEKRDLMIKKKAIEMDLS 209

[Close]
BLAST of Csa2G285290 vs. TrEMBL
Match: B9HH31_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11040g PE=4 SV=2)

HSP 1 Score: 325.1 bits (832), Expect = 9.7e-86
Identity = 167/306 (54.58%), Postives = 219/306 (71.57%), Query Frame = 1 

Query: 20  PLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPHLTASHRDLMVDLIETVENG 79
           PL+  + R  +  ++A   +  +M+   Q     +LMEFPHL A H+DLMV LI  V+  
Sbjct: 20  PLKKISTRKIRNSIRALSTTPSEME---QPMRGQRLMEFPHLLAPHKDLMVGLISAVDKR 79

Query: 80  LGDHLLPST--VPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFN 139
           L  HLLPS+  VP D EYY+NQ+G SQG+L I   + SS IDF++ SWLHL  P GGA +
Sbjct: 80  LHGHLLPSSASVPPDAEYYQNQSGASQGSLCINRGVDSSHIDFILTSWLHLSLPNGGAMD 139

Query: 140 ITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKL 199
           ITNI GYLK S D PHFQFELVQCSPT+ IFFLDL+PR D++L PDYL T+YED+ LE L
Sbjct: 140 ITNIQGYLKSSTDAPHFQFELVQCSPTYFIFFLDLIPRKDLVLHPDYLKTFYEDSQLEAL 199

Query: 200 RQRL-AALPEVSPYFSSSLYFRKVVSSTGILVGVKCQE-SESKRVEEIIQEEIGPISKEV 259
           R++L   + E  PYFSSSLYFR VVS TGILV + C++   ++R EEII++ I PI+ EV
Sbjct: 200 RKQLDTQVLEAKPYFSSSLYFRNVVSPTGILVSITCEDGGTTERAEEIIRDNIDPIANEV 259

Query: 260 MRIWMELCLNNGGRE-LEEDERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEVANRVLQV 319
           + +WM+ C+  GG   +EE+ER  +EKRD MIK +A+EMDLS +MP+QFG++VA+R+L V
Sbjct: 260 LELWMDSCVCKGGTAIIEENERDHLEKRDRMIKSRAVEMDLSSSMPIQFGQDVADRILGV 319

Query: 320 IRSAFK 321
           IR  F+
Sbjct: 320 IRGVFR 322

[Close]
BLAST of Csa2G285290 vs. TrEMBL
Match: V4SF05_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026248mg PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.3e-85
Identity = 163/268 (60.82%), Postives = 201/268 (75.00%), Query Frame = 1 

Query: 54  KLMEFPHLTASHRDLMVDLIETVENGLGDHLLPST-VPTDVEYYENQNGTSQGTLLIRSA 113
           K MEFPHLTA+H+DLMV LI  +E  L  HLL S+ VP DVE+Y+N  GTSQG+L IR  
Sbjct: 10  KPMEFPHLTAAHKDLMVSLISALETRLDSHLLASSAVPPDVEFYQNDQGTSQGSLHIRRG 69

Query: 114 LPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDL 173
           LPSS IDF++ASWLHLK P G A NITN+  YLK S D+PHFQFELVQCSPT+ I FLD+
Sbjct: 70  LPSSHIDFVLASWLHLKVPTGSAMNITNLQAYLKSSTDVPHFQFELVQCSPTYFILFLDV 129

Query: 174 LPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKC 233
            PR D++L P+YL T+YE+  LE LRQRL  +PE  PY SSSLYFR VVS TGILV +KC
Sbjct: 130 TPRKDLVLYPNYLKTFYEEAQLETLRQRLEQVPETKPYLSSSLYFRGVVSPTGILVSIKC 189

Query: 234 QE-SESKRVEEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAI 293
           +E   + R EEII+E + PI+ +VM IW+E   +  G  +   ER+ +EKRDL++K +AI
Sbjct: 190 EEVGGTDRCEEIIREHVSPIAHDVMVIWLEKYFS--GATVGVTERAELEKRDLLVKTRAI 249

Query: 294 EMDLSKTMPLQFGEEVANRVLQVIRSAF 320
           EMDLS ++PLQFG+EVANRVL VI+  F
Sbjct: 250 EMDLSSSLPLQFGQEVANRVLDVIKGVF 275

[Close]
BLAST of Csa2G285290 vs. TAIR10
Match: AT4G37000.1 (AT4G37000.1 accelerated cell death 2 (ACD2))

HSP 1 Score: 243.4 bits (620), Expect = 1.9e-64
Identity = 133/322 (41.30%), Postives = 195/322 (60.56%), Query Frame = 1 

Query: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVL-KAAFQSSEKMDSGGQVAPVSKLMEFP 60
           M ++  N + S+S     SPL  +  R S+ +  +A FQS E  D   +     K MEFP
Sbjct: 1   MAMIFCNTLYSSSSPSYLSPLTSKPSRFSKNLRPRAQFQSMEDHDDHLR----RKFMEFP 60

Query: 61  HLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPID 120
           +++ + + LMVDL+ TVEN L   LLP  +P DV  + N NG+++ +L IRS   SSPID
Sbjct: 61  YVSPTRKQLMVDLMSTVENRLQSQLLPCNLPPDVRNFNNPNGSAEASLHIRSGDKSSPID 120

Query: 121 FMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDII 180
           F+I SW+H K P G + NIT+I+G+L  S   P+F  EL+Q S   L+  LDL  R D++
Sbjct: 121 FVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLV 180

Query: 181 LRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKR 240
           L PDYL  YY+DT L+  RQ L  LPEV+PY S SL+ R   S T  ++ +  +E +  +
Sbjct: 181 LNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEED--K 240

Query: 241 VEEIIQEEIGPISKEVMRIWMELCLNNGGREL--EEDERSLMEKRDLMIKKKAIEMDLSK 300
           +EEI+++ + P +KEV+ +W+E C+     ++   E+ER  +E+RD   ++K+IE DL  
Sbjct: 241 LEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDL 300

Query: 301 TMPLQFGEEVANRVLQVIRSAF 320
             P  FGEEV++RV+  I+ AF
Sbjct: 301 QFPRMFGEEVSSRVVHAIKEAF 316

[Close]
BLAST of Csa2G285290 vs. NCBI nr
Match: gi|449460580|ref|XP_004148023.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis sativus])

HSP 1 Score: 636.0 bits (1639), Expect = 3.7e-179
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 1 

Query: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH 60
           MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH
Sbjct: 1   MGLLAVNLISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPH 60

Query: 61  LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF 120
           LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF
Sbjct: 61  LTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDF 120

Query: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180
           MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL
Sbjct: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180

Query: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240
           RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV
Sbjct: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240

Query: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300
           EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP
Sbjct: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300

Query: 301 LQFGEEVANRVLQVIRSAFKTA 323
           LQFGEEVANRVLQVIRSAFKTA
Sbjct: 301 LQFGEEVANRVLQVIRSAFKTA 322

[Close]
BLAST of Csa2G285290 vs. NCBI nr
Match: gi|659116003|ref|XP_008457850.1| (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo])

HSP 1 Score: 579.3 bits (1492), Expect = 4.1e-162
Identity = 296/325 (91.08%), Postives = 309/325 (95.08%), Query Frame = 1 

Query: 1   MGLLAVNLISSASCFVP---HSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLME 60
           MGLLA NLISSA CFVP    SPLRFQAKRSSQ VLKAA  SSEKMDSGGQ APVSKLME
Sbjct: 1   MGLLAANLISSACCFVPLPPPSPLRFQAKRSSQRVLKAALTSSEKMDSGGQAAPVSKLME 60

Query: 61  FPHLTASHRDLMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSP 120
           FPHLTA+H DLM+ LI+TVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIR  +PSSP
Sbjct: 61  FPHLTAAHTDLMLYLIQTVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRHGIPSSP 120

Query: 121 IDFMIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTD 180
           IDFMIASWLHLKQPQGGAF+ITNIAGY+KPSNDIPHFQFELVQCSPTFLIFFLDLLPRTD
Sbjct: 121 IDFMIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTD 180

Query: 181 IILRPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESES 240
           IIL PDYLTTYYE+TGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKC+ESES
Sbjct: 181 IILHPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESES 240

Query: 241 KRVEEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSK 300
           KRVEEI++EEIGPISKEVMRIWMELCL +GGRELEEDERSLMEKRDLMIK+KAIEMDLSK
Sbjct: 241 KRVEEIVREEIGPISKEVMRIWMELCL-SGGRELEEDERSLMEKRDLMIKRKAIEMDLSK 300

Query: 301 TMPLQFGEEVANRVLQVIRSAFKTA 323
           +MPLQFGEEVANRVLQVIRSAFKTA
Sbjct: 301 SMPLQFGEEVANRVLQVIRSAFKTA 324

[Close]
BLAST of Csa2G285290 vs. NCBI nr
Match: gi|106880172|emb|CAJ80768.1| (red chlorophyll catabolite reductase [Citrullus lanatus])

HSP 1 Score: 539.3 bits (1388), Expect = 4.7e-150
Identity = 274/315 (86.98%), Postives = 294/315 (93.33%), Query Frame = 1 

Query: 8   LISSASCFVPHSPLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPHLTASHRD 67
           L+S A  FVP  PLRFQ K SS+ VLKAA  SSEKM SGG+ A  SKLMEFPHLTA+HRD
Sbjct: 1   LVSRACYFVPLPPLRFQTKSSSRRVLKAALPSSEKMRSGGRGAAESKLMEFPHLTAAHRD 60

Query: 68  LMVDLIETVENGLGDHLLPSTVPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLH 127
           LMVDLI+ VENG+G+HLLPSTVP DVEYYENQ+GTSQGTLLIRSAL SSPIDFMIASWLH
Sbjct: 61  LMVDLIQGVENGVGEHLLPSTVPPDVEYYENQSGTSQGTLLIRSALQSSPIDFMIASWLH 120

Query: 128 LKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTT 187
           L+QPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDI+LRPDYL T
Sbjct: 121 LEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVLRPDYLVT 180

Query: 188 YYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEE 247
           YYE+TGLEK RQ+LAALPEVSPYFSSSLYFRKVVSSTGILV VKC+ES+S+RVEEI++EE
Sbjct: 181 YYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERVEEIVREE 240

Query: 248 IGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV 307
           IGPISKEVMRIWMELC+ NGGRE+EE+ERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV
Sbjct: 241 IGPISKEVMRIWMELCM-NGGREIEEEERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEV 300

Query: 308 ANRVLQVIRSAFKTA 323
           ANRVLQVIRSAFKTA
Sbjct: 301 ANRVLQVIRSAFKTA 314

[Close]
BLAST of Csa2G285290 vs. NCBI nr
Match: gi|253787599|dbj|BAH84859.1| (putative red chlorophyll catabolite reductase, partial [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 4.6e-113
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 1 

Query: 88  TVPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 147
           TVP DVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP
Sbjct: 1   TVPPDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFNITNIAGYLKP 60

Query: 148 SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 207
           SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV
Sbjct: 61  SNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKLRQRLAALPEV 120

Query: 208 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 267
           SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG
Sbjct: 121 SPYFSSSLYFRKVVSSTGILVGVKCQESESKRVEEIIQEEIGPISKEVMRIWMELCLNNG 180

Query: 268 GRELEEDERSLMEKRDLMIKKKAIEMDLS 297
           GRELEEDERSLMEKRDLMIKKKAIEMDLS
Sbjct: 181 GRELEEDERSLMEKRDLMIKKKAIEMDLS 209

[Close]
BLAST of Csa2G285290 vs. NCBI nr
Match: gi|566180698|ref|XP_002310112.2| (hypothetical protein POPTR_0007s11040g [Populus trichocarpa])

HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85
Identity = 167/306 (54.58%), Postives = 219/306 (71.57%), Query Frame = 1 

Query: 20  PLRFQAKRSSQPVLKAAFQSSEKMDSGGQVAPVSKLMEFPHLTASHRDLMVDLIETVENG 79
           PL+  + R  +  ++A   +  +M+   Q     +LMEFPHL A H+DLMV LI  V+  
Sbjct: 20  PLKKISTRKIRNSIRALSTTPSEME---QPMRGQRLMEFPHLLAPHKDLMVGLISAVDKR 79

Query: 80  LGDHLLPST--VPTDVEYYENQNGTSQGTLLIRSALPSSPIDFMIASWLHLKQPQGGAFN 139
           L  HLLPS+  VP D EYY+NQ+G SQG+L I   + SS IDF++ SWLHL  P GGA +
Sbjct: 80  LHGHLLPSSASVPPDAEYYQNQSGASQGSLCINRGVDSSHIDFILTSWLHLSLPNGGAMD 139

Query: 140 ITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIILRPDYLTTYYEDTGLEKL 199
           ITNI GYLK S D PHFQFELVQCSPT+ IFFLDL+PR D++L PDYL T+YED+ LE L
Sbjct: 140 ITNIQGYLKSSTDAPHFQFELVQCSPTYFIFFLDLIPRKDLVLHPDYLKTFYEDSQLEAL 199

Query: 200 RQRL-AALPEVSPYFSSSLYFRKVVSSTGILVGVKCQE-SESKRVEEIIQEEIGPISKEV 259
           R++L   + E  PYFSSSLYFR VVS TGILV + C++   ++R EEII++ I PI+ EV
Sbjct: 200 RKQLDTQVLEAKPYFSSSLYFRNVVSPTGILVSITCEDGGTTERAEEIIRDNIDPIANEV 259

Query: 260 MRIWMELCLNNGGRE-LEEDERSLMEKRDLMIKKKAIEMDLSKTMPLQFGEEVANRVLQV 319
           + +WM+ C+  GG   +EE+ER  +EKRD MIK +A+EMDLS +MP+QFG++VA+R+L V
Sbjct: 260 LELWMDSCVCKGGTAIIEENERDHLEKRDRMIKSRAVEMDLSSSMPIQFGQDVADRILGV 319

Query: 320 IRSAFK 321
           IR  F+
Sbjct: 320 IRGVFR 322

The following BLAST results are available for this feature:
BLAST of Csa2G285290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RCCR_ARATH3.3e-6341.30Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana GN=R... [more]
RCCR_HORVU2.3e-4040.59Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare GN=rccR PE=1 ... [more]
BLAST of Csa2G285290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLX2_CUCSA2.6e-179100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285290 PE=4 SV=1[more]
Q1ELT6_CITLA3.3e-15086.98Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus GN=rccr PE=... [more]
C6L812_CUCSA3.2e-11399.52Putative red chlorophyll catabolite reductase (Fragment) OS=Cucumis sativus GN=C... [more]
B9HH31_POPTR9.7e-8654.58Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s11040g PE=4 SV=2[more]
V4SF05_9ROSI6.3e-8560.82Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026248mg PE=4 SV=1[more]
BLAST of Csa2G285290 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37000.11.9e-6441.30 accelerated cell death 2 (ACD2)[more]
BLAST of Csa2G285290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449460580|ref|XP_004148023.1|3.7e-179100.00PREDICTED: red chlorophyll catabolite reductase-like [Cucumis sativus][more]
gi|659116003|ref|XP_008457850.1|4.1e-16291.08PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo][more]
gi|106880172|emb|CAJ80768.1|4.7e-15086.98red chlorophyll catabolite reductase [Citrullus lanatus][more]
gi|253787599|dbj|BAH84859.1|4.6e-11399.52putative red chlorophyll catabolite reductase, partial [Cucumis sativus][more]
gi|566180698|ref|XP_002310112.2|1.4e-8554.58hypothetical protein POPTR_0007s11040g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009439RCC_reductase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006725 cellular aromatic compound metabolic process
biological_process GO:0044249 cellular biosynthetic process
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0010304 PSII associated light-harvesting complex II catabolic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0009814 defense response, incompatible interaction
biological_process GO:0015996 chlorophyll catabolic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:1901360 organic cyclic compound metabolic process
biological_process GO:0044763 single-organism cellular process
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0050789 regulation of biological process
biological_process GO:0044238 primary metabolic process
biological_process GO:0042440 pigment metabolic process
biological_process GO:1901564 organonitrogen compound metabolic process
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0046483 heterocycle metabolic process
biological_process GO:0051186 cofactor metabolic process
biological_process GO:0034641 cellular nitrogen compound metabolic process
biological_process GO:0044260 cellular macromolecule metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005739 mitochondrion
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
molecular_function GO:0003674 molecular_function
molecular_function GO:0051743 red chlorophyll catabolite reductase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088755cucumber EST collection version 3.0transcribed_cluster
CU101994cucumber EST collection version 3.0transcribed_cluster
CU116902cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G285290.1Csa2G285290.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU101994CU101994transcribed_cluster
CU088755CU088755transcribed_cluster
CU116902CU116902transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009439Red chlorophyll catabolite reductasePFAMPF06405RCC_reductasecoord: 65..316
score: 3.8E
NoneNo IPR availablePANTHERPTHR34685FAMILY NOT NAMEDcoord: 1..322
score: 1.9E
NoneNo IPR availablePANTHERPTHR34685:SF2RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTICcoord: 1..322
score: 1.9E