Csa2G150520 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G150520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 9028891 .. 9029300 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTGCACAAGTAGCCTCTCAGTACATGTTCCGAAACGTTTTTTGCTTGCGGAGCCGGTTGGTCATTCCCGCTATCTTCGATTGGCTATCTTCTATTGCCTTTCTCCAGCCGCCAGTGCATAGCTACTTTGCTCAACTCGTCAGACTCTTCGCCTATCTCTTAAGAGATCACAGGTGAATCAAATCAAACTCATCAACCAACCTCCACATCTGTGTATCCCTTGCTACAAGTACATTATAGTTAATTGACTTTCCTAGAAGTTTCATGATCAAAGCCATTCGCTTCCCTCAATTCTTTCTTTTGAGCCTAGTCAGTTTCACCATTTTCATACCTTCCATTAGATAAAGATGAACAGATTCAACGTTCTAATGGATAGGACCGAGGCTCATCAAAAACAAGGTTGA

mRNA sequence

ATGGGGATTGCACAAGTAGCCTCTCAGTACATGTTCCGAAACGTTTTTTGCTTGCGGAGCCGGTTGGTCATTCCCGCTATCTTCGATTGGCTATCTTCTATTGCCTTTCTCCAGCCGCCAGTGCATAGCTACTTTGCTCAACTCGTCAGACTCTTCGCCTATCTCTTAAGAGATCACAGAAGTTTCATGATCAAAGCCATTCGCTTCCCTCAATTCTTTCTTTTGAGCCTAATAAAGATGAACAGATTCAACGTTCTAATGGATAGGACCGAGGCTCATCAAAAACAAGGTTGA

Coding sequence (CDS)

ATGGGGATTGCACAAGTAGCCTCTCAGTACATGTTCCGAAACGTTTTTTGCTTGCGGAGCCGGTTGGTCATTCCCGCTATCTTCGATTGGCTATCTTCTATTGCCTTTCTCCAGCCGCCAGTGCATAGCTACTTTGCTCAACTCGTCAGACTCTTCGCCTATCTCTTAAGAGATCACAGAAGTTTCATGATCAAAGCCATTCGCTTCCCTCAATTCTTTCTTTTGAGCCTAATAAAGATGAACAGATTCAACGTTCTAATGGATAGGACCGAGGCTCATCAAAAACAAGGTTGA

Protein sequence

MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHRSFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG*
Homology
[Close]
BLAST of Csa2G150520 vs. TrEMBL
Match: A0A0A0LI14_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150520 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 2.1e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60
          MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR
Sbjct: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60

Query: 61 SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG 98
          SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG
Sbjct: 61 SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG 97

[Close]
BLAST of Csa2G150520 vs. NCBI nr
Match: gi|700206391|gb|KGN61510.1| (hypothetical protein Csa_2G150520 [Cucumis sativus])

HSP 1 Score: 196.1 bits (497), Expect = 3.0e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1 

Query: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60
          MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR
Sbjct: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60

Query: 61 SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG 98
          SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG
Sbjct: 61 SFMIKAIRFPQFFLLSLIKMNRFNVLMDRTEAHQKQG 97

The following BLAST results are available for this feature:
BLAST of Csa2G150520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI14_CUCSA2.1e-47100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G150520 PE=4 SV=1[more]
BLAST of Csa2G150520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206391|gb|KGN61510.1|3.0e-47100.00hypothetical protein Csa_2G150520 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU156771cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G150520.1Csa2G150520.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU156771CU156771transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G150520CsGy2G009670Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G150520Cucumber (Gy14) v1cgycuB296
Csa2G150520Melon (DHL92) v3.5.1cumeB134
Csa2G150520Watermelon (Charleston Gray)cuwcgB158
Csa2G150520Melon (DHL92) v3.6.1cumedB127