CsGy2G009670 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G009670
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 9153376 .. 9153621 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTGCACAAGGAGCCTCTCAGTACATGTTCCGAAACCTTCTTTTCTTGCGGAGCCGGTCGGTCATTCCCGCTATCTTCGATTGGCTATCTTCGGTTGGCTTTCTCCAGCCGCCAGCGCATAGCTACTTTGCTCAGCTCGTCAGACTCTTCGCCTATCTCTTAAGAGACCGCAGGTCAATCAGATCAAACTCATCAGCCAGCCTCCACATCTGTGTAACCCTTGCTACAAGTACATTATAG

mRNA sequence

ATGGGGATTGCACAAGGAGCCTCTCAGTACATGTTCCGAAACCTTCTTTTCTTGCGGAGCCGGTCGGTCATTCCCGCTATCTTCGATTGGCTATCTTCGGTTGGCTTTCTCCAGCCGCCAGCGCATAGCTACTTTGCTCAGCTCGTCAGACTCTTCGCCTATCTCTTAAGAGACCGCAGGTCAATCAGATCAAACTCATCAGCCAGCCTCCACATCTGTGTAACCCTTGCTACAAGTACATTATAG

Coding sequence (CDS)

ATGGGGATTGCACAAGGAGCCTCTCAGTACATGTTCCGAAACCTTCTTTTCTTGCGGAGCCGGTCGGTCATTCCCGCTATCTTCGATTGGCTATCTTCGGTTGGCTTTCTCCAGCCGCCAGCGCATAGCTACTTTGCTCAGCTCGTCAGACTCTTCGCCTATCTCTTAAGAGACCGCAGGTCAATCAGATCAAACTCATCAGCCAGCCTCCACATCTGTGTAACCCTTGCTACAAGTACATTATAG

Protein sequence

MGIAQGASQYMFRNLLFLRSRSVIPAIFDWLSSVGFLQPPAHSYFAQLVRLFAYLLRDRRSIRSNSSASLHICVTLATSTL
Homology
[Close]
BLAST of CsGy2G009670 vs. NCBI nr
Match: KGN61510.1 (hypothetical protein Csa_2G150520 [Cucumis sativus])

HSP 1 Score: 106.3 bits (264), Expect = 5.0e-20
Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 1  MGIAQGASQYMFRNLLFLRSRSVIPAIFDWLSSVGFLQPPAHSYFAQLVRLFAYLLRDRR 60
          MGIAQ ASQYMFRN+  LRSR VIPAIFDWLSS+ FLQPP HSYFAQLVRLFAYLLRD R
Sbjct: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]
BLAST of CsGy2G009670 vs. TrEMBL
Match: tr|A0A0A0LI14|A0A0A0LI14_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150520 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.3e-20
Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 1  MGIAQGASQYMFRNLLFLRSRSVIPAIFDWLSSVGFLQPPAHSYFAQLVRLFAYLLRDRR 60
          MGIAQ ASQYMFRN+  LRSR VIPAIFDWLSS+ FLQPP HSYFAQLVRLFAYLLRD R
Sbjct: 1  MGIAQVASQYMFRNVFCLRSRLVIPAIFDWLSSIAFLQPPVHSYFAQLVRLFAYLLRDHR 60

Query: 61 S 62
          S
Sbjct: 61 S 61

The following BLAST results are available for this feature:
BLAST of CsGy2G009670 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61510.15.0e-2085.25hypothetical protein Csa_2G150520 [Cucumis sativus][more]
BLAST of CsGy2G009670 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G009670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G009670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LI14|A0A0A0LI14_CUCSA3.3e-2085.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G150520 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G009670.1CsGy2G009670.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G009670Csa2G150520Cucumber (Chinese Long) v2cgybcuB056
CsGy2G009670CsaV3_2G011900Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G009670Cucurbita moschata (Rifu)cgybcmoB186
CsGy2G009670Cucurbita pepo (Zucchini)cgybcpeB175
CsGy2G009670Melon (DHL92) v3.5.1cgybmeB115
CsGy2G009670Melon (DHL92) v3.6.1cgybmedB114
CsGy2G009670Wild cucumber (PI 183967)cgybcpiB056