Csa2G075370 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G075370
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6156549 .. 6157111 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGTAAGAACCATTAGGTCATTGGTCCCACTTCTACAAGAAACGATCAACCATCTTTACTTTGTTCGTCACCGATCCCACTTCTAGTAAGAACGATCGAGCATCCTTAATCTATTGTCAGCGATCACACTTCTAATACGAACGATATTAGGACATTTTTACTCTAACGTCATCATTCCCACTTCTACTAGAAACAATCGACACTCTTACTCTGCCTTTACCCATCCCACTTTTGCTAGGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

mRNA sequence

ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

Coding sequence (CDS)

ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

Protein sequence

MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL*
Homology
[Close]
BLAST of Csa2G075370 vs. TrEMBL
Match: A0A0A0LHK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075370 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS 60
           MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS
Sbjct: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS 60

Query: 61  TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 109
           TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL
Sbjct: 61  TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 108

[Close]
BLAST of Csa2G075370 vs. NCBI nr
Match: gi|700206159|gb|KGN61278.1| (hypothetical protein Csa_2G075370 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 2.1e-54
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1 

Query: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS 60
           MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS
Sbjct: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTS 60

Query: 61  TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 109
           TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL
Sbjct: 61  TRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 108

The following BLAST results are available for this feature:
BLAST of Csa2G075370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHK8_CUCSA1.5e-54100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075370 PE=4 SV=1[more]
BLAST of Csa2G075370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206159|gb|KGN61278.1|2.1e-54100.00hypothetical protein Csa_2G075370 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G075370.1Csa2G075370.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G075370CsGy2G007610Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G075370Watermelon (97103) v2cuwmbB109
Csa2G075370Wax gourdcuwgoB139
Csa2G075370Cucumber (Gy14) v1cgycuB274
Csa2G075370Cucurbita maxima (Rimu)cmacuB165
Csa2G075370Cucurbita maxima (Rimu)cmacuB786
Csa2G075370Cucurbita moschata (Rifu)cmocuB150
Csa2G075370Cucurbita moschata (Rifu)cmocuB779
Csa2G075370Melon (DHL92) v3.5.1cumeB133
Csa2G075370Watermelon (Charleston Gray)cuwcgB103
Csa2G075370Watermelon (97103) v1cuwmB156
Csa2G075370Cucurbita pepo (Zucchini)cpecuB098
Csa2G075370Cucurbita pepo (Zucchini)cpecuB811
Csa2G075370Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G075370Melon (DHL92) v3.6.1cumedB132
Csa2G075370Silver-seed gourdcarcuB0184
Csa2G075370Silver-seed gourdcarcuB0736