CsGy2G007610 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G007610
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 6231443 .. 6232005 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGTAAGAACCATTAGGTCATTGGTCCCACTTCTACAAGAAACGATCAACCATCTTTACTTTGTTCGTCACCGATCCCACTTCTAGTAAGAACGATCGAGCATCCTTAATCTATTGTCAGCGATCACACTTCTAATACGAACGATATTAGGACATTTTTACTCTAACGTCATCATTCCCACTTCTACTAGAAACAATCGACACTCTTACTCTGCCTTTACCCATCCCACTTTTGCTAGGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

mRNA sequence

ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

Coding sequence (CDS)

ATGATCAAGCACTCTATGGTCAAAGATCTCACTTCTACTAGAAACAATCGAGCACTTTTTACCGTGTCGTCAACAATTCCATTTCTAGAACGATCAGACACCTTTACTGTGTTGTCAACGATTCCACTTCTAGTGGCAATGATCAGGTACCCTTACTCTGTCGTCAGGGATCCCACTTCTACTAGAAACAATCGGACCATTTATTTTGTCGGCAACGATCTCACTTCTAGTAGAAATGATGGGGTTCCTTTATTCTGTTGTCATGATCCTACTACTACAAGTGATCAAGCGTCCTTATCGTGTCGTCAGCGATCCTATTTCTTGTAA

Protein sequence

MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVLSTIPLLVAMIRYPYSVVRDPTSTRNNRTIYFVGNDLTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL
Homology
[Close]
BLAST of CsGy2G007610 vs. NCBI nr
Match: KGN61278.1 (hypothetical protein Csa_2G075370 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-34
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX 60
           MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX
Sbjct: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 109
           XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL
Sbjct: 61  XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 108

[Close]
BLAST of CsGy2G007610 vs. TrEMBL
Match: tr|A0A0A0LHK8|A0A0A0LHK8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075370 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.1e-34
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX 60
           MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX
Sbjct: 1   MIKHSMVKDLTSTRNNRALFTVSSTIPFLERSDTFTVXXXXPLLVAMIRYPXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 109
           XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL
Sbjct: 61  XXXXXXXXXXXXXXTSSRNDGVPLFCCHDPTTTSDQASLSCRQRSYFL 108

The following BLAST results are available for this feature:
BLAST of CsGy2G007610 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61278.11.6e-34100.00hypothetical protein Csa_2G075370 [Cucumis sativus][more]
BLAST of CsGy2G007610 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G007610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G007610 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LHK8|A0A0A0LHK8_CUCSA1.1e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G075370 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G007610.1CsGy2G007610.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G007610Csa2G075370Cucumber (Chinese Long) v2cgybcuB056
CsGy2G007610CsaV3_2G009820Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G007610Cucurbita maxima (Rimu)cgybcmaB169
CsGy2G007610Cucurbita maxima (Rimu)cgybcmaB252
CsGy2G007610Cucurbita moschata (Rifu)cgybcmoB161
CsGy2G007610Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G007610Cucurbita pepo (Zucchini)cgybcpeB163
CsGy2G007610Cucurbita pepo (Zucchini)cgybcpeB261
CsGy2G007610Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G007610Melon (DHL92) v3.5.1cgybmeB120
CsGy2G007610Melon (DHL92) v3.6.1cgybmedB118
CsGy2G007610Watermelon (Charleston Gray)cgybwcgB102
CsGy2G007610Watermelon (97103) v1cgybwmB148
CsGy2G007610Wild cucumber (PI 183967)cgybcpiB056
CsGy2G007610Silver-seed gourdcarcgybB0179
CsGy2G007610Silver-seed gourdcarcgybB0714
CsGy2G007610Watermelon (97103) v2cgybwmbB104
CsGy2G007610Wax gourdcgybwgoB132