Csa2G057580 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G057580
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 4289270 .. 4289540 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTGTAAGCTTAAAAGACTTGTCGCCTGTGACATAATTGGCCGCTTACAACCTATTGATTCAACTCTTATGCTGCCTAGTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

mRNA sequence

ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

Coding sequence (CDS)

ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

Protein sequence

MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHVTLLA*
Homology
[Close]
BLAST of Csa2G057580 vs. TrEMBL
Match: A0A0A0LH86_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G057580 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.2e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60
          MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV
Sbjct: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60

Query: 61 TLLA 65
          TLLA
Sbjct: 61 TLLA 64

[Close]
BLAST of Csa2G057580 vs. NCBI nr
Match: gi|700206004|gb|KGN61123.1| (hypothetical protein Csa_2G057580 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 1 

Query: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60
          MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV
Sbjct: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60

Query: 61 TLLA 65
          TLLA
Sbjct: 61 TLLA 64

The following BLAST results are available for this feature:
BLAST of Csa2G057580 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH86_CUCSA2.2e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G057580 PE=4 SV=1[more]
BLAST of Csa2G057580 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206004|gb|KGN61123.1|3.2e-29100.00hypothetical protein Csa_2G057580 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G057580.1Csa2G057580.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G057580CsGy2G006020Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G057580Melon (DHL92) v3.6.1cumedB111
Csa2G057580Melon (DHL92) v3.6.1cumedB132
Csa2G057580Silver-seed gourdcarcuB0060
Csa2G057580Silver-seed gourdcarcuB0805
Csa2G057580Silver-seed gourdcarcuB0806
Csa2G057580Watermelon (97103) v2cuwmbB109
Csa2G057580Watermelon (97103) v2cuwmbB150
Csa2G057580Wax gourdcuwgoB136
Csa2G057580Wax gourdcuwgoB212
Csa2G057580Cucumber (Chinese Long) v2cucuB012
Csa2G057580Cucumber (Gy14) v1cgycuB096
Csa2G057580Cucumber (Gy14) v1cgycuB098
Csa2G057580Cucurbita maxima (Rimu)cmacuB072
Csa2G057580Cucurbita maxima (Rimu)cmacuB076
Csa2G057580Cucurbita maxima (Rimu)cmacuB077
Csa2G057580Cucurbita maxima (Rimu)cmacuB117
Csa2G057580Cucurbita maxima (Rimu)cmacuB122
Csa2G057580Cucurbita maxima (Rimu)cmacuB786
Csa2G057580Cucurbita moschata (Rifu)cmocuB064
Csa2G057580Cucurbita moschata (Rifu)cmocuB067
Csa2G057580Cucurbita moschata (Rifu)cmocuB109
Csa2G057580Cucurbita moschata (Rifu)cmocuB779
Csa2G057580Melon (DHL92) v3.5.1cumeB114
Csa2G057580Melon (DHL92) v3.5.1cumeB139
Csa2G057580Watermelon (Charleston Gray)cuwcgB103
Csa2G057580Watermelon (Charleston Gray)cuwcgB150
Csa2G057580Watermelon (97103) v1cuwmB163
Csa2G057580Watermelon (97103) v1cuwmB176
Csa2G057580Cucurbita pepo (Zucchini)cpecuB098
Csa2G057580Cucurbita pepo (Zucchini)cpecuB374
Csa2G057580Cucurbita pepo (Zucchini)cpecuB666
Csa2G057580Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G057580Bottle gourd (USVL1VR-Ls)culsiB135