CsGy2G006020 (gene) Cucumber (Gy14) v2

Overview
NameCsGy2G006020
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr2 : 4313462 .. 4313732 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTGTAAGCTTAAAAGACTTGTCGCCTGTGACATAATTGGCCGCTTACAACCTATTGATTCAACTCTTATGCTGCCTAGTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

mRNA sequence

ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

Coding sequence (CDS)

ATGGCTCCCAACTTAACACTTAGGGCAATATTGCATGCTCGTGCCACCTTTTGTCGCCTAGCTTGGAGTGCATGGCATGCCTTTGGTCTGGCTGCAAATCTTGCTCGTTTTTACTTCCCTCGTCTAGGGTGTGATTTAATTTTGGTTGCTCATAACAAAGCCTTTAGAGGTTCTCATGTCACTCTCCTTGCTTAG

Protein sequence

MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHVTLLA
Homology
[Close]
BLAST of CsGy2G006020 vs. NCBI nr
Match: KGN61123.1 (hypothetical protein Csa_2G057580 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 1.3e-28
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60
          MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV
Sbjct: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60

Query: 61 TLLA 65
          TLLA
Sbjct: 61 TLLA 64

[Close]
BLAST of CsGy2G006020 vs. TrEMBL
Match: tr|A0A0A0LH86|A0A0A0LH86_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G057580 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 8.9e-29
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60
          MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV
Sbjct: 1  MAPNLTLRAILHARATFCRLAWSAWHAFGLAANLARFYFPRLGCDLILVAHNKAFRGSHV 60

Query: 61 TLLA 65
          TLLA
Sbjct: 61 TLLA 64

The following BLAST results are available for this feature:
BLAST of CsGy2G006020 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61123.11.3e-28100.00hypothetical protein Csa_2G057580 [Cucumis sativus][more]
BLAST of CsGy2G006020 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy2G006020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy2G006020 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LH86|A0A0A0LH86_CUCSA8.9e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G057580 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy2G006020.1CsGy2G006020.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy2G006020Csa2G057580Cucumber (Chinese Long) v2cgybcuB056
CsGy2G006020CsaV3_2G008230Cucumber (Chinese Long) v3cgybcucB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy2G006020Wax gourdcgybwgoB132
CsGy2G006020Wax gourdcgybwgoB204
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB153
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB155
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB156
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB164
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB166
CsGy2G006020Cucurbita maxima (Rimu)cgybcmaB252
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB158
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB145
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB148
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB153
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB157
CsGy2G006020Cucurbita moschata (Rifu)cgybcmoB240
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB164
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB206
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB207
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB209
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB233
CsGy2G006020Cucurbita pepo (Zucchini)cgybcpeB236
CsGy2G006020Bottle gourd (USVL1VR-Ls)cgyblsiB089
CsGy2G006020Bottle gourd (USVL1VR-Ls)cgyblsiB124
CsGy2G006020Melon (DHL92) v3.5.1cgybmeB098
CsGy2G006020Melon (DHL92) v3.5.1cgybmeB120
CsGy2G006020Melon (DHL92) v3.6.1cgybmedB118
CsGy2G006020Watermelon (Charleston Gray)cgybwcgB102
CsGy2G006020Watermelon (Charleston Gray)cgybwcgB139
CsGy2G006020Watermelon (Charleston Gray)cgybwcgB147
CsGy2G006020Watermelon (97103) v1cgybwmB155
CsGy2G006020Watermelon (97103) v1cgybwmB160
CsGy2G006020Watermelon (97103) v1cgybwmB167
CsGy2G006020Wild cucumber (PI 183967)cgybcpiB049
CsGy2G006020Wild cucumber (PI 183967)cgybcpiB056
CsGy2G006020Silver-seed gourdcarcgybB0061
CsGy2G006020Silver-seed gourdcarcgybB0781
CsGy2G006020Silver-seed gourdcarcgybB0782
CsGy2G006020Cucumber (Chinese Long) v3cgybcucB063
CsGy2G006020Watermelon (97103) v2cgybwmbB104
CsGy2G006020Watermelon (97103) v2cgybwmbB144