Csa2G034770 (gene) Cucumber (Chinese Long) v2

NameCsa2G034770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 3464518 .. 3464883 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTGGAAGAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGATGAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAACACGAAGGCCATGAGAGACGGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCAATGAAGAAGATGGTTATAATTACAACAACAAATCCAACATCATTCCTCTTCAATTATCAGCTGCTTCATCTTCAACAACAAAACAATTCAATGAAAAGAAACAACAAGAAGAAGATAAACATTACAAGGTTGTAGAAGTAAAAAAGGGGCTTGACCTTAATCTCTCTCTTTGA

mRNA sequence

ATGGAAAGTGGAAGAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGATGAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAACACGAAGGCCATGAGAGACGGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCAATGAAGAAGATGGTTATAATTACAACAACAAATCCAACATCATTCCTCTTCAATTATCAGCTGCTTCATCTTCAACAACAAAACAATTCAATGAAAAGAAACAACAAGAAGAAGATAAACATTACAAGGTTGTAGAAGTAAAAAAGGGGCTTGACCTTAATCTCTCTCTTTGA

Coding sequence (CDS)

ATGGAAAGTGGAAGAAAAAGAAGAAAATTGCAAGAGGAAGAAGAAGAAGAAGAAGATGAAAAGATGGAGTTGTTCTATGCTTTGATTCAAAACACGAAGGCCATGAGAGACGGAATGAAATATTCAAAAGAATTAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCGAAGTTTCAACCAGAAGATTTCAATGAAGAAGATGGTTATAATTACAACAACAAATCCAACATCATTCCTCTTCAATTATCAGCTGCTTCATCTTCAACAACAAAACAATTCAATGAAAAGAAACAACAAGAAGAAGATAAACATTACAAGGTTGTAGAAGTAAAAAAGGGGCTTGACCTTAATCTCTCTCTTTGA

Protein sequence

MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLSL*
BLAST of Csa2G034770 vs. Swiss-Prot
Match: NIMI3_ARATH (Protein NIM1-INTERACTING 3 OS=Arabidopsis thaliana GN=NIMIN-3 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = 1

Query: 5   RKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYS---KELTEEEKSKGVWNPKFQP 64
           R R++++ E+E++E+EKME  Y +++N + MR  +  S   K   EEE+++    P FQP
Sbjct: 3   RDRKRVKMEKEDDEEEKMEKLYTVLKNAREMRKYVNSSMEKKRQEEEERARVRRFPSFQP 62

Query: 65  EDF---NEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLN 122
           EDF   N+ +  N    +N         SSS + +++  K+++E     V      LDLN
Sbjct: 63  EDFIFMNKAEANNIEKAAN--------ESSSASNEYDGSKEKQEGSETNVC-----LDLN 112

BLAST of Csa2G034770 vs. TrEMBL
Match: A0A0A0LJ23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034770 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.8e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1

Query: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60
           MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ
Sbjct: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60

Query: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS 120
           PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS
Sbjct: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS 120

Query: 121 L 122
           L
Sbjct: 121 L 121

BLAST of Csa2G034770 vs. TrEMBL
Match: V4SLD2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013538mg PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.2e-13
Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 1

Query: 5   RKRRKLQEEE---EEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEE-----------K 64
           + +RKLQ EE   +E E+EK+E F+ALI+NTK M D ++ S+ L EE+           K
Sbjct: 14  KNKRKLQNEELQEQENEEEKVEQFFALIRNTKEMHDRLRNSEGLKEEKEKQMEQEIKAAK 73

Query: 65  SKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVE 122
               WNP FQPEDF E D  N N   N         SSS  ++  E+K++ E +     E
Sbjct: 74  VSAAWNPTFQPEDFTEGDINNINASKNFFGENQQVGSSSKIQENEEEKEKAEARK----E 133

BLAST of Csa2G034770 vs. TrEMBL
Match: A0A061F4Z3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_026807 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-12
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 1

Query: 1   MESGRKRRKL-------------QEEEEEEEDEKMELFYALIQNTKAMRDGMKY----SK 60
           MESGRK+RK+             +E++EEEE+EK+E F+ALI++T+ MRD ++     SK
Sbjct: 1   MESGRKKRKMGNQEEEEDDEEEEEEDDEEEEEEKVEKFFALIRSTREMRDRLRNVPNGSK 60

Query: 61  ELTEEEKSK-----GVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKK 120
           E  E +K +      VWNPKFQPEDF E+     +   N++ +  +  SS+        +
Sbjct: 61  EEEERKKQEEKQVAAVWNPKFQPEDFMED-----SKPKNLLAVNEAGPSSN--------R 120

Query: 121 QQEEDKHYKVVEVKKGLDLNLSL 122
           +QE+ +  K      GLDL LSL
Sbjct: 121 EQEQGQDTKEGGEDGGLDLKLSL 130

BLAST of Csa2G034770 vs. TrEMBL
Match: A0A0L9TYF7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g158700 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.0e-11
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 1

Query: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60
           ME GR++RK+  EEE EE E+ME F+ALI++TK  RD +   KE   EEK+KGVW P F+
Sbjct: 1   MEGGRRKRKMAREEESEE-EQMEKFFALIKSTKEARDQLSKQKE---EEKAKGVWKPSFE 60

Query: 61  PEDF---------NEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEV 120
           PEDF         N +DG   + K          ++  TT+  +  +    +K       
Sbjct: 61  PEDFMDDQELVKINFKDGPARSGKETEQDPPHKESAEPTTEPHSRNQNGNNNK------P 120

Query: 121 KKGLDLNLSL 122
              LDLNLSL
Sbjct: 121 THDLDLNLSL 120

BLAST of Csa2G034770 vs. TrEMBL
Match: A0A0S3SQP4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G181900 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.0e-11
Identity = 51/130 (39.23%), Postives = 69/130 (53.08%), Query Frame = 1

Query: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60
           ME GR++RK+  EEE EE E+ME F+ALI++TK  RD +   KE   EEK+KGVW P F+
Sbjct: 1   MEGGRRKRKMAREEESEE-EQMEKFFALIKSTKEARDQLSKQKE---EEKAKGVWKPSFE 60

Query: 61  PEDF---------NEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEV 120
           PEDF         N +DG   + K          ++  TT+  +  +    +K       
Sbjct: 61  PEDFMDDQELVKINFKDGPARSGKETEQDPPHKESAEPTTEPHSRNQNGNNNK------P 120

Query: 121 KKGLDLNLSL 122
              LDLNLSL
Sbjct: 121 THDLDLNLSL 120

BLAST of Csa2G034770 vs. TAIR10
Match: AT1G09415.1 (AT1G09415.1 NIM1-interacting 3)

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 41/123 (33.33%), Postives = 65/123 (52.85%), Query Frame = 1

Query: 5   RKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYS---KELTEEEKSKGVWNPKFQP 64
           R R++++ E+E++E+EKME  Y +++N + MR  +  S   K   EEE+++    P FQP
Sbjct: 3   RDRKRVKMEKEDDEEEKMEKLYTVLKNAREMRKYVNSSMEKKRQEEEERARVRRFPSFQP 62

Query: 65  EDF---NEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLN 122
           EDF   N+ +  N    +N         SSS + +++  K+++E     V      LDLN
Sbjct: 63  EDFIFMNKAEANNIEKAAN--------ESSSASNEYDGSKEKQEGSETNVC-----LDLN 112

BLAST of Csa2G034770 vs. TAIR10
Match: AT1G02450.1 (AT1G02450.1 NIM1-interacting 1)

HSP 1 Score: 50.8 bits (120), Expect = 6.8e-07
Identity = 41/130 (31.54%), Postives = 68/130 (52.31%), Query Frame = 1

Query: 2   ESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEE----------KS 61
           E+ R  ++++E+EEEEE++K++ F+ LI++ +  R   +  +EL E            + 
Sbjct: 26  ETIRVDKRVREDEEEEEEKKIDTFFKLIKHYQEAR--KRRREELAENSGVVRRKSNGGER 85

Query: 62  KGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEV 121
            G+  P FQPEDF++        ++ + P  +     S  K+ N K +QEED+  +  E 
Sbjct: 86  SGIVVPAFQPEDFSQ-------CRTGLKPPLMFV---SDHKEENTKVEQEEDQTEERNE- 142

BLAST of Csa2G034770 vs. NCBI nr
Match: gi|700205905|gb|KGN61024.1| (hypothetical protein Csa_2G034770 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 6.9e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1

Query: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60
           MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ
Sbjct: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEEKSKGVWNPKFQ 60

Query: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS 120
           PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS
Sbjct: 61  PEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVKKGLDLNLS 120

Query: 121 L 122
           L
Sbjct: 121 L 121

BLAST of Csa2G034770 vs. NCBI nr
Match: gi|985452232|ref|XP_015386592.1| (PREDICTED: protein NIM1-INTERACTING 3 [Citrus sinensis])

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-13
Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 1

Query: 5   RKRRKLQEEE---EEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEE-----------K 64
           + +RKLQ EE   +E E+EK+E F+ALI+NTK M D ++ S+ L EE+           K
Sbjct: 14  KNKRKLQNEELQEQENEEEKVEQFFALIRNTKEMHDRLRNSEGLKEEKEKEMEQEIKAAK 73

Query: 65  SKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVE 122
               WNP FQPEDF E D  N N   N         SSS  ++  E+K++ E +     E
Sbjct: 74  VSAAWNPTFQPEDFTEGDINNINASKNFFGENQQVGSSSKIQENEEEKEKAEARK----E 133

BLAST of Csa2G034770 vs. NCBI nr
Match: gi|567871295|ref|XP_006428237.1| (hypothetical protein CICLE_v10013538mg [Citrus clementina])

HSP 1 Score: 82.8 bits (203), Expect = 4.6e-13
Identity = 52/131 (39.69%), Postives = 69/131 (52.67%), Query Frame = 1

Query: 5   RKRRKLQEEE---EEEEDEKMELFYALIQNTKAMRDGMKYSKELTEEE-----------K 64
           + +RKLQ EE   +E E+EK+E F+ALI+NTK M D ++ S+ L EE+           K
Sbjct: 14  KNKRKLQNEELQEQENEEEKVEQFFALIRNTKEMHDRLRNSEGLKEEKEKQMEQEIKAAK 73

Query: 65  SKGVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVE 122
               WNP FQPEDF E D  N N   N         SSS  ++  E+K++ E +     E
Sbjct: 74  VSAAWNPTFQPEDFTEGDINNINASKNFFGENQQVGSSSKIQENEEEKEKAEARK----E 133

BLAST of Csa2G034770 vs. NCBI nr
Match: gi|590644944|ref|XP_007031220.1| (Uncharacterized protein TCM_026807 [Theobroma cacao])

HSP 1 Score: 79.7 bits (195), Expect = 3.9e-12
Identity = 54/143 (37.76%), Postives = 80/143 (55.94%), Query Frame = 1

Query: 1   MESGRKRRKL-------------QEEEEEEEDEKMELFYALIQNTKAMRDGMKY----SK 60
           MESGRK+RK+             +E++EEEE+EK+E F+ALI++T+ MRD ++     SK
Sbjct: 1   MESGRKKRKMGNQEEEEDDEEEEEEDDEEEEEEKVEKFFALIRSTREMRDRLRNVPNGSK 60

Query: 61  ELTEEEKSK-----GVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKK 120
           E  E +K +      VWNPKFQPEDF E+     +   N++ +  +  SS+        +
Sbjct: 61  EEEERKKQEEKQVAAVWNPKFQPEDFMED-----SKPKNLLAVNEAGPSSN--------R 120

Query: 121 QQEEDKHYKVVEVKKGLDLNLSL 122
           +QE+ +  K      GLDL LSL
Sbjct: 121 EQEQGQDTKEGGEDGGLDLKLSL 130

BLAST of Csa2G034770 vs. NCBI nr
Match: gi|657999954|ref|XP_008392413.1| (PREDICTED: protein NIM1-INTERACTING 1 [Malus domestica])

HSP 1 Score: 78.6 bits (192), Expect = 8.6e-12
Identity = 55/129 (42.64%), Postives = 75/129 (58.14%), Query Frame = 1

Query: 1   MESGRKRRKLQEEEEEEEDEKMELFYALIQNTKAMR-------DGMKYSK-ELTEEEKSK 60
           ME G K+RK+ E+EEE+E+EK+E FYALI++T+ +R       +G K  K E  E++K+ 
Sbjct: 1   MEGGGKKRKM-EDEEEDEEEKIEKFYALIRSTREVRQLLRGNSNGSKEKKYEKKEDDKAA 60

Query: 61  GVWNPKFQPEDFNEEDGYNYNNKSNIIPLQLSAASSSTTKQFNEKKQQEEDKHYKVVEVK 120
           G WNP FQPEDF E+   + ++             SS  KQ  +KK  EEDK        
Sbjct: 61  GGWNPTFQPEDFLEDVKISGHH----------GGGSSKAKQEEDKK--EEDK------XS 110

Query: 121 KGLDLNLSL 122
            GL+LNLSL
Sbjct: 121 NGLNLNLSL 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
NIMI3_ARATH5.2e-0933.33Protein NIM1-INTERACTING 3 OS=Arabidopsis thaliana GN=NIMIN-3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LJ23_CUCSA4.8e-62100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G034770 PE=4 SV=1[more]
V4SLD2_9ROSI3.2e-1339.69Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013538mg PE=4 SV=1[more]
A0A061F4Z3_THECC2.7e-1237.76Uncharacterized protein OS=Theobroma cacao GN=TCM_026807 PE=4 SV=1[more]
A0A0L9TYF7_PHAAN3.0e-1139.23Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g158700 PE=4 SV=1[more]
A0A0S3SQP4_PHAAN3.0e-1139.23Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G181900 PE=... [more]
Match NameE-valueIdentityDescription
AT1G09415.12.9e-1033.33 NIM1-interacting 3[more]
AT1G02450.16.8e-0731.54 NIM1-interacting 1[more]
Match NameE-valueIdentityDescription
gi|700205905|gb|KGN61024.1|6.9e-62100.00hypothetical protein Csa_2G034770 [Cucumis sativus][more]
gi|985452232|ref|XP_015386592.1|4.6e-1339.69PREDICTED: protein NIM1-INTERACTING 3 [Citrus sinensis][more]
gi|567871295|ref|XP_006428237.1|4.6e-1339.69hypothetical protein CICLE_v10013538mg [Citrus clementina][more]
gi|590644944|ref|XP_007031220.1|3.9e-1237.76Uncharacterized protein TCM_026807 [Theobroma cacao][more]
gi|657999954|ref|XP_008392413.1|8.6e-1242.64PREDICTED: protein NIM1-INTERACTING 1 [Malus domestica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
Vocabulary: Biological Process
TermDefinition
GO:0010112regulation of systemic acquired resistance
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010112 regulation of systemic acquired resistance
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G034770.1Csa2G034770.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33669FAMILY NOT NAMEDcoord: 1..121
score: 2.3
NoneNo IPR availablePANTHERPTHR33669:SF2SUBFAMILY NOT NAMEDcoord: 1..121
score: 2.3