Csa2G021530 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G021530
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	TIR-NBS disease resistance-like protein; contains IPR000157 (Toll/interleukin-1 receptor homology (TIR) domain)
Location	Chr2 : 2560028 .. 2560402 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGTGTCAAAAGGGTATCAATGTTTTCATAGATGATGACAAGCTTCCAAGGGGTGAAGAAATTTGTACATCTCTTTTGAAAGCCATCGAAGAATCGAAAATCTCGATTGTTATAATTTCAGAAAATTATGCATCTTCCCATTGGTGTTTGGATGAACTGATGAAAATCATTATGTGTAACAAATCCAATAATCGACAAGTCGTTTTTCCTGTTTTTTACAAAGTGAATCCATCTCATGTACGACGACAAAGGGGAGTATTTGGAGAAGAATTTGCCAAACTCCAAGTTAGGTTCTCCAACAAGATGCAAGCATGGAGTGAGGCTCTAACTTTCATCTCCACTATGTCTGGATGGGATCTAAAAAACTAG

mRNA sequence

ATGGCTTTGTGTCAAAAGGGTATCAATGTTTTCATAGATGATGACAAGCTTCCAAGGGGTGAAGAAATTTGTACATCTCTTTTGAAAGCCATCGAAGAATCGAAAATCTCGATTGTTATAATTTCAGAAAATTATGCATCTTCCCATTGGTGTTTGGATGAACTGATGAAAATCATTATGTGTAACAAATCCAATAATCGACAAGTCGTTTTTCCTGTTTTTTACAAAGTGAATCCATCTCATGTACGACGACAAAGGGGAGTATTTGGAGAAGAATTTGCCAAACTCCAAGTTAGGTTCTCCAACAAGATGCAAGCATGGAGTGAGGCTCTAACTTTCATCTCCACTATGTCTGGATGGGATCTAAAAAACTAG

Coding sequence (CDS)

ATGGCTTTGTGTCAAAAGGGTATCAATGTTTTCATAGATGATGACAAGCTTCCAAGGGGTGAAGAAATTTGTACATCTCTTTTGAAAGCCATCGAAGAATCGAAAATCTCGATTGTTATAATTTCAGAAAATTATGCATCTTCCCATTGGTGTTTGGATGAACTGATGAAAATCATTATGTGTAACAAATCCAATAATCGACAAGTCGTTTTTCCTGTTTTTTACAAAGTGAATCCATCTCATGTACGACGACAAAGGGGAGTATTTGGAGAAGAATTTGCCAAACTCCAAGTTAGGTTCTCCAACAAGATGCAAGCATGGAGTGAGGCTCTAACTTTCATCTCCACTATGTCTGGATGGGATCTAAAAAACTAG

Protein sequence

MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKN*

Homology

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BLAST of Csa2G021530 vs. Swiss-Prot
Match: RLM3_ARATH (Disease resistance protein RLM3 OS=Arabidopsis thaliana GN=RLM3 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-22
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 3   LCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCN 62
           L +K IN F +D+++ R  +I   LL AIE S+IS+V+ S+NYASS WCLDEL+KI  C 
Sbjct: 32  LDRKFINTF-NDNRIERSRKITPELLLAIENSRISLVVFSKNYASSTWCLDELVKIQECY 91

Query: 63  KSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAK-LQVRFSNKMQAWSEALTFISTMSGWD 122
           +  + Q+V P+FYKV+PSHVR+Q G FG  F +  + R  N+ + W  AL  ++ ++G D
Sbjct: 92  EKLD-QMVIPIFYKVDPSHVRKQTGEFGMVFGETCKGRTENEKRKWMRALAEVAHLAGED 151

Query: 123 LKN 125
           L+N
Sbjct: 152 LRN 152

[Close]

BLAST of Csa2G021530 vs. Swiss-Prot
Match: RPP4_ARATH (Disease resistance protein RPP4 OS=Arabidopsis thaliana GN=RPP4 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.2e-22
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1


Query: 2   ALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMC 61
           AL ++ IN F+D   + R   I  +L+ AI E++ISIVI SENYASS WCL+EL++I  C
Sbjct: 35  ALDRRSINTFMDHG-IVRSCIIADALITAIREARISIVIFSENYASSTWCLNELVEIHKC 94

Query: 62  NKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAK-LQVRFSNKMQAWSEALTFISTMSGW 121
            K    Q+V PVFY V+PSHVR+Q G FG+ F K  + +  ++ Q W +ALT IS ++G 
Sbjct: 95  YK-KGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWVKALTDISNLAGE 154

Query: 122 DLKN 125
           DL+N
Sbjct: 155 DLRN 156

[Close]

BLAST of Csa2G021530 vs. Swiss-Prot
Match: RLM1A_ARATH (Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-22
Identity = 57/119 (47.90%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 7   GINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNN 66
           GI +F DD ++ RGE I  +L +AI ES+ISIV++S+NYASS WCLDEL++I+ C K + 
Sbjct: 41  GITMF-DDQRILRGETISPALTQAIRESRISIVLLSKNYASSGWCLDELLEILKC-KDDM 100

Query: 67  RQVVFPVFYKVNPSHVRRQRGVFGEEFAK-LQVRFSNKMQAWSEALTFISTMSGWDLKN 125
            Q+V  VFY V+PS VR+Q G FG  F +    R   + Q WS+AL ++  ++G  L N
Sbjct: 101 GQIVMTVFYGVDPSDVRKQTGEFGIAFNETCACRTEEERQKWSQALNYVGNIAGEHLLN 157

[Close]

BLAST of Csa2G021530 vs. Swiss-Prot
Match: ADR2_ARATH (Disease resistance protein ADR2 OS=Arabidopsis thaliana GN=ADR2 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 7.9e-21
Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 1


Query: 7   GINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNN 66
           GI +F DD+ + R + I  +L KAI ES+++IV++S+NYASS WCLDEL++I+ C K   
Sbjct: 40  GITMF-DDNGIERSQIIAPALKKAIGESRVAIVLLSKNYASSSWCLDELLEILKC-KEYI 99

Query: 67  RQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQV-RFSNKMQAWSEALTFISTMSGWD 122
            Q+V  VFY+V+PSHVR+Q G FG  F +    +   +   WS+ALT++  ++G D
Sbjct: 100 GQIVMTVFYEVDPSHVRKQTGDFGIAFKETCAHKTEEERSKWSQALTYVGNIAGED 153

[Close]

BLAST of Csa2G021530 vs. Swiss-Prot
Match: TMVRN_NICGU (TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 1


Query: 3   LCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCN 62
           L  KGI  F DD +L  G  I   L KAIEES+ +IV+ SENYA+S WCL+EL+KI+ C 
Sbjct: 35  LNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVVFSENYATSRWCLNELVKIMEC- 94

Query: 63  KSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNK---MQAWSEALTFISTMSG 120
           K+  +Q V P+FY V+PSHVR Q+  F + F + + ++ +    +Q W  AL   + + G
Sbjct: 95  KTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKYKDDVEGIQRWRIALNEAANLKG 153

[Close]

BLAST of Csa2G021530 vs. TrEMBL
Match: A0A0A0LJJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021530 PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 8.1e-65
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120

Query: 121 DLKN 125
           DLKN
Sbjct: 121 DLKN 124

[Close]

BLAST of Csa2G021530 vs. TrEMBL
Match: E7CHD5_CUCSA (Putative TIR-CC-NBS-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 8.1e-65
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 37  MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

[Close]

BLAST of Csa2G021530 vs. TrEMBL
Match: D9I8I6_CUCSA (TIR-CC-NBS-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 37  MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKV+PSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVDPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

[Close]

BLAST of Csa2G021530 vs. TrEMBL
Match: A0A0A0LGB6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021540 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-38
Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           M L Q+GINVFID  KL RGEEIC SLL+AIE SKISIV+ISE+YASS WCL+EL+KIIM
Sbjct: 38  MTLRQRGINVFIDK-KLSRGEEICASLLEAIEGSKISIVVISESYASSSWCLNELVKIIM 97

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNK    QVV P+FYKV+PS V +Q G FGEEFAKL+VRF NKMQAW EAL  +S MSGW
Sbjct: 98  CNKLRG-QVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGW 155

[Close]

BLAST of Csa2G021530 vs. TrEMBL
Match: D9I8I5_CUCSA (Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-38
Identity = 87/120 (72.50%), Postives = 98/120 (81.67%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           M L Q+GINVFID  KL RGEEIC SLL+AIE SKISIV+ISE+YASS WCL+EL+KIIM
Sbjct: 38  MTLRQRGINVFIDK-KLSRGEEICASLLEAIEGSKISIVVISESYASSSWCLNELVKIIM 97

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNK    QVV P+FYKV+PS V +Q G FGEEFAKL+VRF NKMQAW EAL  +S MSGW
Sbjct: 98  CNKLRG-QVVLPIFYKVDPSEVGKQSGRFGEEFAKLEVRFFNKMQAWKEALITVSHMSGW 155

[Close]

BLAST of Csa2G021530 vs. TAIR10
Match: AT5G36930.2 (AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 118.2 bits (295), Expect = 3.5e-27
Identity = 58/119 (48.74%), Postives = 83/119 (69.75%), Query Frame = 1


Query: 7   GINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNN 66
           GI+ F+DD +L RGE I   LL AIE SKI IV+++++YASS WCLDEL+ I+  +K+N 
Sbjct: 44  GISTFMDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIMKSHKNNP 103

Query: 67  RQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFS-NKMQAWSEALTFISTMSGWDLKN 125
             +VFP+F  V+PS +R Q+G + + F+K +     NK++ W EALT ++ +SGWD+KN
Sbjct: 104 SHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANISGWDIKN 162

[Close]

BLAST of Csa2G021530 vs. TAIR10
Match: AT1G63750.3 (AT1G63750.3 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 107.1 bits (266), Expect = 8.1e-24
Identity = 61/119 (51.26%), Postives = 80/119 (67.23%), Query Frame = 1


Query: 6   KGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSN 65
           KGI +F DD+K+ RG ++  SL +AI+ SKISIVI+S+ YASS WCLDEL++ IM  K  
Sbjct: 44  KGITMF-DDEKIKRGGDLSPSLKRAIKTSKISIVILSQKYASSSWCLDELLE-IMKRKKA 103

Query: 66  NRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNK-MQAWSEALTFISTMSGWDLK 124
            +Q+V  VFY V PS VR+Q G FG  F K  V  ++K  + WS+ALT +S ++G D K
Sbjct: 104 MKQIVMTVFYGVEPSDVRKQTGDFGIAFNKTCVNKTDKERKEWSKALTDVSNIAGEDFK 160

[Close]

BLAST of Csa2G021530 vs. TAIR10
Match: AT4G16990.2 (AT4G16990.2 disease resistance protein (TIR-NBS class), putative)

HSP 1 Score: 107.1 bits (266), Expect = 8.1e-24
Identity = 58/123 (47.15%), Postives = 82/123 (66.67%), Query Frame = 1


Query: 3   LCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCN 62
           L +K IN F +D+++ R  +I   LL AIE S+IS+V+ S+NYASS WCLDEL+KI  C 
Sbjct: 32  LDRKFINTF-NDNRIERSRKITPELLLAIENSRISLVVFSKNYASSTWCLDELVKIQECY 91

Query: 63  KSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAK-LQVRFSNKMQAWSEALTFISTMSGWD 122
           +  + Q+V P+FYKV+PSHVR+Q G FG  F +  + R  N+ + W  AL  ++ ++G D
Sbjct: 92  EKLD-QMVIPIFYKVDPSHVRKQTGEFGMVFGETCKGRTENEKRKWMRALAEVAHLAGED 151

Query: 123 LKN 125
           L+N
Sbjct: 152 LRN 152

[Close]

BLAST of Csa2G021530 vs. TAIR10
Match: AT5G17680.1 (AT5G17680.1 disease resistance protein (TIR-NBS-LRR class), putative)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 1


Query: 7   GINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMCNKSNN 66
           GI  F DD  L RG+ I   L+ AI+ S+ +IV++S NYA+S WCLDEL+KI+ CNK   
Sbjct: 45  GIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVVVSRNYAASSWCLDELLKIMECNK--- 104

Query: 67  RQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGWDLKN 125
              + P+FY+V+PS VRRQRG FGE+      +   K+  W EAL  ++ +SG D +N
Sbjct: 105 -DTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK--EKVGKWKEALKKLAAISGEDSRN 156

[Close]

BLAST of Csa2G021530 vs. TAIR10
Match: AT4G16960.1 (AT4G16960.1 Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = 1


Query: 2   ALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIMC 61
           AL ++ IN F+D   + R   I   L+ AI E++ISIVI SENYASS WCL+EL++I  C
Sbjct: 35  ALDRRSINTFMDHG-IVRSCIIADELITAIREARISIVIFSENYASSTWCLNELVEIHKC 94

Query: 62  NKSNN-RQVVFPVFYKVNPSHVRRQRGVFGEEFAK-LQVRFSNKMQAWSEALTFISTMSG 121
           +K  +  Q+V PVFY V+PSHVR+Q G FG+ F K  + +  ++ Q W +ALT IS ++G
Sbjct: 95  HKDKDLDQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDKPEDQKQRWVKALTDISNLAG 154

Query: 122 WDLKN 125
            DL+N
Sbjct: 155 EDLRN 158

[Close]

BLAST of Csa2G021530 vs. NCBI nr
Match: gi|778674001|ref|XP_011650105.1| (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 37  MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

[Close]

BLAST of Csa2G021530 vs. NCBI nr
Match: gi|700205763|gb|KGN60882.1| (hypothetical protein Csa_2G021530 [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120

Query: 121 DLKN 125
           DLKN
Sbjct: 121 DLKN 124

[Close]

BLAST of Csa2G021530 vs. NCBI nr
Match: gi|315507089|gb|ADU33180.1| (putative TIR-CC-NBS-AAA+ATPase [Cucumis sativus])

HSP 1 Score: 254.2 bits (648), Expect = 1.2e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 37  MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

[Close]

BLAST of Csa2G021530 vs. NCBI nr
Match: gi|298953303|gb|ADI99936.1| (TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus])

HSP 1 Score: 252.3 bits (643), Expect = 4.4e-64
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM
Sbjct: 37  MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKV+PSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVDPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

[Close]

BLAST of Csa2G021530 vs. NCBI nr
Match: gi|659070420|ref|XP_008454982.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 5.6e-59
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 1


Query: 1   MALCQKGINVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELMKIIM 60
           MALCQKG+ VFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDEL+KIIM
Sbjct: 37  MALCQKGVKVFIDDDKLPRGEEICTSLLKAIEESKISIVIISENYASSHWCLDELIKIIM 96

Query: 61  CNKSNNRQVVFPVFYKVNPSHVRRQRGVFGEEFAKLQVRFSNKMQAWSEALTFISTMSGW 120
           CNKSNNRQVVFPVFYKV+PS VR+Q G FGEEF KLQVRFSNKMQAWSEALTFIS+MSGW
Sbjct: 97  CNKSNNRQVVFPVFYKVDPSQVRQQSGRFGEEFGKLQVRFSNKMQAWSEALTFISSMSGW 156

Query: 121 DLKN 125
           DLKN
Sbjct: 157 DLKN 160

The following BLAST results are available for this feature:

BLAST of Csa2G021530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLM3_ARATH	1.4e-22	47.15	Disease resistance protein RLM3 OS=Arabidopsis thaliana GN=RLM3 PE=2 SV=1	[more]
RPP4_ARATH	3.2e-22	49.19	Disease resistance protein RPP4 OS=Arabidopsis thaliana GN=RPP4 PE=1 SV=1	[more]
RLM1A_ARATH	5.5e-22	47.90	Disease resistance protein RML1A OS=Arabidopsis thaliana GN=RLM1A PE=3 SV=1	[more]
ADR2_ARATH	7.9e-21	45.69	Disease resistance protein ADR2 OS=Arabidopsis thaliana GN=ADR2 PE=2 SV=1	[more]
TMVRN_NICGU	1.4e-20	44.17	TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1	[more]

BLAST of Csa2G021530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJJ2_CUCSA	8.1e-65	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021530 PE=4 SV=1	[more]
E7CHD5_CUCSA	8.1e-65	100.00	Putative TIR-CC-NBS-AAA+ATPase OS=Cucumis sativus PE=4 SV=1	[more]
D9I8I6_CUCSA	3.1e-64	99.19	TIR-CC-NBS-AAA+ATPase class resistance protein OS=Cucumis sativus PE=4 SV=1	[more]
A0A0A0LGB6_CUCSA	1.3e-38	72.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G021540 PE=4 SV=1	[more]
D9I8I5_CUCSA	1.3e-38	72.50	Putative TIR-NBS-LRR-AAA+ATPase OS=Cucumis sativus PE=4 SV=1	[more]

BLAST of Csa2G021530 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G36930.2	3.5e-27	48.74	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G63750.3	8.1e-24	51.26	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G16990.2	8.1e-24	47.15	disease resistance protein (TIR-NBS class), putative	[more]
AT5G17680.1	1.4e-23	46.61	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT4G16960.1	1.4e-23	48.80	Disease resistance protein (TIR-NBS-LRR class) family	[more]

BLAST of Csa2G021530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674001\|ref\|XP_011650105.1\|	1.2e-64	100.00	PREDICTED: TMV resistance protein N-like [Cucumis sativus]	[more]
gi\|700205763\|gb\|KGN60882.1\|	1.2e-64	100.00	hypothetical protein Csa_2G021530 [Cucumis sativus]	[more]
gi\|315507089\|gb\|ADU33180.1\|	1.2e-64	100.00	putative TIR-CC-NBS-AAA+ATPase [Cucumis sativus]	[more]
gi\|298953303\|gb\|ADI99936.1\|	4.4e-64	99.19	TIR-CC-NBS-AAA+ATPase class resistance protein [Cucumis sativus]	[more]
gi\|659070420\|ref\|XP_008454982.1\|	5.6e-59	91.94	PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000157	TIR_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007165	signal transduction

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043531	ADP binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G021530.1	Csa2G021530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	GENE3D	G3DSA:3.40.50.10140		coord: 3..97 score: 2.1
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 3..113 score: 4.4
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 1..117 score: 1.4
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROFILE	PS50104	TIR	coord: 1..117 score: 23
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	unknown	SSF52200	Toll/Interleukin receptor TIR domain	coord: 2..120 score: 7.46
None	No IPR available	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 2..124 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G021530	MELO3C004290	Melon (DHL92) v3.5.1	cumeB139
Csa2G021530	MELO3C004260	Melon (DHL92) v3.5.1	cumeB144
Csa2G021530	CSPI02G03720	Wild cucumber (PI 183967)	cpicuB065
Csa2G021530	CmoCh05G011790	Cucurbita moschata (Rifu)	cmocuB782

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G021530	Cucumber (Gy14) v1	cgycuB096
Csa2G021530	Cucurbita maxima (Rimu)	cmacuB173
Csa2G021530	Cucurbita maxima (Rimu)	cmacuB791
Csa2G021530	Cucurbita moschata (Rifu)	cmocuB157
Csa2G021530	Cucurbita moschata (Rifu)	cmocuB783
Csa2G021530	Watermelon (Charleston Gray)	cuwcgB122
Csa2G021530	Watermelon (97103) v1	cuwmB147
Csa2G021530	Cucurbita pepo (Zucchini)	cpecuB103
Csa2G021530	Cucurbita pepo (Zucchini)	cpecuB820
Csa2G021530	Bottle gourd (USVL1VR-Ls)	culsiB098
Csa2G021530	Cucumber (Gy14) v2	cgybcuB056
Csa2G021530	Melon (DHL92) v3.6.1	cumedB132
Csa2G021530	Silver-seed gourd	carcuB0735
Csa2G021530	Silver-seed gourd	carcuB0917
Csa2G021530	Watermelon (97103) v2	cuwmbB118
Csa2G021530	Wax gourd	cuwgoB150