Csa2G010350 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G010350
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 1956086 .. 1956283 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG

mRNA sequence

ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG

Coding sequence (CDS)

ATGGCGCTCAAGGTGTTGTGCCCATACTCTTTCCGTCAAATGTTCGAAGCATCGATTTATGCAAAAAGGCAGAAGCGTTCTGCCTTTAGGCATCGCGAAACCGAGGCTAGCGCTACATCAAGTCCCACTTCATATTTTTGCTATGTTTTGTCTCGGTTCGCTTTGGTTGATCGTTTGATTCCAAATTGCTCAAATTAG

Protein sequence

MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLIPNCSN*
Homology
[Close]
BLAST of Csa2G010350 vs. TrEMBL
Match: A0A0A0LIC3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010350 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 6.5e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
          MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI
Sbjct: 1  MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60

Query: 61 PNCSN 66
          PNCSN
Sbjct: 61 PNCSN 65

[Close]
BLAST of Csa2G010350 vs. NCBI nr
Match: gi|700205680|gb|KGN60799.1| (hypothetical protein Csa_2G010350 [Cucumis sativus])

HSP 1 Score: 134.0 bits (336), Expect = 9.3e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 1 

Query: 1  MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60
          MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI
Sbjct: 1  MALKVLCPYSFRQMFEASIYAKRQKRSAFRHRETEASATSSPTSYFCYVLSRFALVDRLI 60

Query: 61 PNCSN 66
          PNCSN
Sbjct: 61 PNCSN 65

The following BLAST results are available for this feature:
BLAST of Csa2G010350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIC3_CUCSA6.5e-29100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G010350 PE=4 SV=1[more]
BLAST of Csa2G010350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205680|gb|KGN60799.1|9.3e-29100.00hypothetical protein Csa_2G010350 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0043531 ADP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G010350.1Csa2G010350.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G010350CSPI02G02900Wild cucumber (PI 183967)cpicuB065
Csa2G010350CsGy2G003020Cucumber (Gy14) v2cgybcuB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G010350Watermelon (97103) v2cuwmbB118
Csa2G010350Watermelon (97103) v2cuwmbB134
Csa2G010350Watermelon (97103) v2cuwmbB171
Csa2G010350Wax gourdcuwgoB137
Csa2G010350Wax gourdcuwgoB209
Csa2G010350Cucumber (Chinese Long) v2cucuB054
Csa2G010350Cucumber (Chinese Long) v2cucuB082
Csa2G010350Cucumber (Gy14) v1cgycuB184
Csa2G010350Cucumber (Gy14) v1cgycuB364
Csa2G010350Cucurbita maxima (Rimu)cmacuB173
Csa2G010350Cucurbita maxima (Rimu)cmacuB791
Csa2G010350Cucurbita moschata (Rifu)cmocuB157
Csa2G010350Cucurbita moschata (Rifu)cmocuB783
Csa2G010350Melon (DHL92) v3.5.1cumeB139
Csa2G010350Melon (DHL92) v3.5.1cumeB147
Csa2G010350Watermelon (Charleston Gray)cuwcgB095
Csa2G010350Watermelon (Charleston Gray)cuwcgB122
Csa2G010350Watermelon (Charleston Gray)cuwcgB139
Csa2G010350Watermelon (97103) v1cuwmB106
Csa2G010350Watermelon (97103) v1cuwmB125
Csa2G010350Watermelon (97103) v1cuwmB147
Csa2G010350Cucurbita pepo (Zucchini)cpecuB007
Csa2G010350Cucurbita pepo (Zucchini)cpecuB005
Csa2G010350Cucurbita pepo (Zucchini)cpecuB103
Csa2G010350Cucurbita pepo (Zucchini)cpecuB820
Csa2G010350Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G010350Cucumber (Gy14) v2cgybcuB104
Csa2G010350Cucumber (Gy14) v2cgybcuB299
Csa2G010350Melon (DHL92) v3.6.1cumedB132
Csa2G010350Melon (DHL92) v3.6.1cumedB138
Csa2G010350Silver-seed gourdcarcuB0735
Csa2G010350Silver-seed gourdcarcuB1087