Csa2G00090 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G00090
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	ATP-dependent DNA helicase Q1; contains IPR004589 (DNA helicase, ATP-dependent, RecQ type), IPR011991 (Winged helix-turn-helix DNA-binding domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
Location	Chr2 : 77000 .. 85602 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATTCATTTGAAATTCACATAATCGTGGAAACAAAAAACTGACTAAAATATTGAAAAATGAGTAGAATCTCGATCTGGATGGATCTAGAGATGGGACGAGAAAAACTATTTGAAAGAGTTTTAAAAATGGTGTTTGTGCTATTTCTGGCCATTTACCAACTTTTTGCTTTTTGAGTATTTTATACCATTTTCCGACGGTGCACAAGGGAAGGGGCAGAAAGAAAAAAATCGCCGTAGGTGAACATTGTTTGAAGATTCAGGCAGGTAGAAATGAAGAAGTCATCACTTCCATTGCTGAGTAATAACCGTCCAGAAAAGCACAAATATAGCAAGGAATCCTTGACGAAGCTCTTAAGGTGGCATTTTGGACATTCCGAGTTTAGGGGAAAGCAACTGGAAACCATTGAAGCTGTTTTATCAGGTAAATACTTCAGCTGAATCTGAAATAAATAAATAAAAAAACGTAGGGAAAAGAATCGTTATTTTGATTGGCATATACCAAGAAAACTTACTTTCAGAGCCAGGACTAGGAGAACGAATTGAGACTTTGTTGTATTTCTACTTTATACTATTGATTCACCTTGTTTCCAACTGTAGCTCGCAGATATAACATGCTGTATGTTCATTATTGTTGTGAAAACATTGTATATGGGTTTTGTTAGCTCTTTATTGTTCTTTCTTGCTTAGGAAAAGATTGTTTCTGTCTCATGCCCACTGGGGGAGGGAAGTCAGTGTGTTACCAGATTCCTGCTCTAGCTTCAAATGGAATGGTGCTTGTTGTTTGTCCTTTAATAGGTGAATGCTATTCAGTTTCTTTATTTACAGTTTGGACGATTTTAACTACCAAAATGTTTTTTTGTATAAGATAATTCTCCCTGCTCTTGCCTAAATCATCAAGTATTCGCTTGCAGCATTGATGGTAAGCATCGAAGTGTTTGTTTCTTGTTCCCTTTCTGACAATTGTGTTTCTCGGTTTGTAATTCTTTGACAATTTCCACAACGCTGATCGCACTATATCAGGAAAACCAAGTGATGGCCTTGAAGGAAAAGGGAATTTCTGCTGAATATTTATCCTCGACTCAGTCAACACAGGCCAAAAATAAAGTGAATCATCTCCTAATCATACTTGTATTATGATGTCTGCTTTGACGACACTCATTATTCCTCAAAATTATTATTATTTTTTTAAAAAGCAAATCTATATTATTATTATTTTCTTTGTAAATATTTTAAGAAGTTTTGACATTTAAATTAATTTTCCTATTCTTACTACTCATCTGTATGGGTAGGTATCATCAGTCTTTCTAAAGCAATACCAAAATTAGCTGTATTCTACTTGCACGAGGTTGTTTAAAGTTATTTTTAGATTACAAACTTATTGTTATTCCATCACCTTGCTATTTTTCAACCTTGTCTGTGAAGAAAGTTTCATCATGGTCTTAAATATTTTTTGCATGTAATAGAATAGAAGAGCAGGAAGATGCCTTTGTTTCCGTTCTCCTTATTGTGGAAATCTTTTGTTGTTCATAAGCTCGTCCTCTCATCTTTCATAATTTCTGTTTACTTGATACAAACATTACTTACCCAGAAACAATGCGTGTAACAATCTTCTTCATCCAGATTCACGAAGATCTCAATTCTAGTAAACCTACTTTAAGGCTTCTCTATGTTACGCCTGAATTAATTGCAACATCAGGATTCATGGCAAAATTGATGAAAATTTATTCTAGAGGATTACTAAATCTGATTGCTATAGACGAGGTGAACTATATTCTTGTATTATGTGTGAACGCCGCGTTTTATCTTTTTCAATCACACCTTCATCTTCATTTTAATGCAATTTTCAGGCTCATTGTATTTCAACATGGGGCCATGACTTCAGGTTTGTGATAGTCATAGAGGAGATAATCAATTGTTGTCTTATAGTAATAGACTGTAATACTGACCTCTTTTTTATATTAGAGTACCGTTTCCATTTTTCTTCGTTTTCTCACCGGGTCACTCTTTGTTTTACTCTCTCTACTTTTGTGATATACCATTAAATATCAAGTTGACCAAAGCTATTGATCCTCTATACTTGTCCTATGTCAATTTAGTGCTCATCTTATTCGTAACATATGCCAATCTTGTTGCTTATGAAGGAACTTTGTTTTTCCTTCTCATCTTCTTTTTCGTTTTTTTTGGGTGGGTGGGGGAGTTTGCTTATGTAGTTTTGGTGATGTCTCCTCACTAATCACTTTTATTGCCCTTTTATGTTTTGACACAGGCCTAGCTACCGCAAGCTTTCCTCTTTGAGGAGTCAACTTCCTAATATTCCTATACTGGCTTTGACGGCTACTGCTGTTCCTAAGTGAGTTATTATCACCCTTTCACTTTAAATTTTTTTGTGGGCATCATACACTTGGTTTGAGCATACCAATCCTTTTGTCAAGTTATTATAGTTCTTAACCTTGTATTAAAATTTAAACCATCTTTTGCTTTTTTGAGTAATTTTGTCAATTGTTATCCTTTGCACGTTCATGAGATGGACTTCAGGTCTCTTTTTCTCTCACTAGCAAAAATTTGATGTATGTTCCTATGCTGATGGTGTTCTTATGAAGAGAAAGTTCTACACTTATAGTGCACAATTCAGTTGGATATGAATTTTTTTCTCTGAAAGATTCTGCAAGCGAGCATATCTCTCTGAATATCCTACTGTTCATTTTTTCATAGTCTTGTCACTATATTGGCGACAGTTTGTTGAGATTTTCCCCTCACTTTCTAGTTTCTATATGGATGGTAGAAGTCAGTGACATGTAGATACTGATTTTAAAATTCCGAGAGATTAAATCCTGGTTTTTTCTTTGTTTCCGCAGAGTGCAGAAAGATGTGATAATATCCTTGGGCTTGGAAAACCCTCTAGTTCTTAAGTCTTCATTTAATCGTCCTAACATATATTATGAAGGTTTGTCCTGGTGGCTCAACTTCGAGTGTATGTCCCCCCGCTCAATTTACATGTTGCAGCATTAGAAAATTGGGATGAACTAATTGAATATCCTCTGTTCTATACGATCTCATATTGGTGCCCCTCATCAGTCATACAAAATAAAGAACTTGATCTTATTTTCTCCTCCAATGGCTAGGCTGTTGATACCCTGGATGATGTGCTCCCTGTCACATTTCTCATGCTGTCCCAGGAAACCTAATATGATTTTTTGGACCATTTTTTTTTCTTTATTTTTAATGTAGTAGGCTTAGAATAGATTAGGGTATCTTGATCAACTCCATCTTTGATTAGGATTAGGATTTGTTAGGATTATGATTATTTTCTTGGGTTTAATAGGGATGAAATTACCTTTTTTGATTAATTAGGATTAAGATTAGTTTACTTCCCAATTCTCTATAGATGGAGGAATTATCTTCTTGTATTGATAACTTTTGATTCATAATAAAGACTTCGATTTGATTCTTAGAGGGAGTTCTCAATTTATCTCTTAGGCTATATCAATTTTGCATCTCTAATTCAAAATTATATTGAGCTAAAATTAGGTTTTAGTTGGCTCGTGTAAACTTCAGCGGTCTATCTCTAGGATGCATTGGCTGTTTGCTAGTACGTTTCATGGTTTGCATGCTAACATGAAAGTTCATGTTGTCATAGGTTCGGTAAATTTACAGTTGCATTTGAGTGAAAATTAATTATGCAGTTCGATACAAAGATCTTTTGGATGATCCACTTGCCGATTTGTGTAATCAACTGAAATCTAGTGGAGATGTTTGTGCAATCATCTATTGCCTAGAGCGTGCAATGTGCGATCAATTGTCAGTTTATCTAGCAAAATATGGCATTTCATGCGCTGGTAAGAAAAGATTTCTGCTCTTGGAATTGGATCTTCAGCACTCAGAGTTTTATTTGTTCAAATATTTACATGTTGATCGTCTGTTGGTTTTCAGCTTATCATGCGGGTTTGAAGAATGAGTTGAGGAAGTCTGTTTTAGAGGATTGGATAAGCTCTAGGATACAAGTTGTTGTGGCCACAGTAGCTTTTGGGTATAGTTCTTGATAAATCTTTATCCTCATTTAACCTCAATAGTCAGACTTGGTGTATTTTCTTTTTTAACATAAATGTCTTGAAAATTTTGTATTTGACCCTCAAACTGAAATATAATTTATACTGCACTTGATGTCATCGAGTATGTTCTATAAGCCAAACCATTAGAAGGTGAGAAAGATGTGATAAGCATGGCATTATAATTCGGTCTCACTCTTTTGAGGATTTAAATTAAATAGGTACTGTACTGTTTGTATGTTTTAAAACTATGATGTACCTTACGTTGTAATTTTGTCTTTCACTATGTCCTTTTGCCTAGAGCCACTCTGGTGCTTGCACAATTACTGAATTGGCGGTACTCCTTTCAGGATGGTAAGTATTTACTTGATTTTCTTTAAGTAAAAATTTGGACATGTGTGCTCTTGTTTTGTGCAGTACAGGAGGAGCATTAATTTTGCTAATTCCATGTTGTTGTGTTACGTAGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGTTAATTTCTGAACTGGAACTTGCTGTTCTCTTCTCTCTTTAGGCTGCATTTGATTTCACATCATCTATTTATTCATTTAACATTTTTTTCATTTTCGCAGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGGTGATTTTCTTCTTCTTTTGTAATTTGCAATGATATTTTTTGCCATTATTTTGATGTCCTGGCACAACTGAATGCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTAGGAGGAAGGTGTTAGGTCTTCAATTTATTCCAATATATGTAAGGGTAAGAAAGCAATTGCTCATGTTAGCGAGAGTGGGACGTCCATGTAAGATGGTGGGGGACCACAGTTAGTTACGTGTGTGGGAGGGTTTATTTTGCATATTCATTCTCGAGAGAGAAGTCTCAGCCTTCCTAGAGGTTGAGGAGTCTGTACTTTGCCCTAGGGCAAGTTTCTTTCACTGAATAAGAATATCGAAAGCTAGATGCCTTTCAGAAGGTCTATTTGTACAATTGGTGTCTGTTTTCTTTTCAACTCTTGAATATTGTCCCAAAAGCTAATAAATGTTTATGTAACTGTTGGATAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGGTGCTTGTCTTAAAATAGTTTAAAATTTTTAAAATGTTTAAAATTTATTATTGAAAAGGCTAGCTGTAAATCTTATAGGCCACATATTTATTGAAGTAAAATATCTTATTACTTTCTTCATTTTGTTGTACAGTTAGGTGGATGATTAGTAGATATTCGTGAGCAGGTTAAAAAATACAAACACACTTATTTTAGAAGCTTTATGCATTTTGAAGTGTTTGGAAACATAAGGAGTGCCTAAGATTGATGATCAACAAGTTTCTTACTACAGATCCTTTTCCTTGTCATTTGCTTGAATTTGTTATGTCCCTGGATTTAGACATAGTGGTAATTCCCAGACATTCGTCTGATGGGAGTGTTTGTTGTTGGAATGGTGATTATGAATAAAGTTAGGGAAGCTAGCCAGGTTAGGAGATACTGGTTAAGTATTCCAAGTAGCCTGGAATTGGAGAGTTTAATCATCCTTATTTTTAATCTTTTGTTTATCTAAATACAAATATCAGCTTGGTTCATATCGTCATCAAATTTCTCATTTCAAGATTTTGGACCGTAGACGGTTAATGGACGTTGTTACTATCCTAAATGAGCATCGATATCTTGTACTAAATGTTGTCTCAAATCCTTCATTTAGTTACTTTTAAGTCTTCTTTTGAGTACAACAAATAAGTGAGTATGAGGATTTGAACCTTTAATTTTTTTAAAAAATATGTTGACCATTGAACTATGCACAATGGGCTCTCACTGACTCAGAATTGTTTTCATGTATTGATAAAAACCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGGTACAAATCCTTTTAATGGACTCGATTGCTCTTCTTCTCTTCCAGCCACGTAGCTTCATTTGTATATAATTTGGTGGGTTGGGTTTGGATATTTATTTTATTAATGCATATTTTTAGTTTAAATTTTCGCAAATTGTCAGATGATACTGAGGTTGTCAAAAGCCTAACTGGGATGAAGTCTCTAAAGAAATCAGGACTAAATGAAAAGATGGCACTTCTAGAGCGTGCAGAAGCAAACTATTACCAGAACAAGATTTCAGTTAAACAGGTTTGGTTTGATCGTTTCTTTTTTCCCCTGATTTTTTTTGGGAAACAGAAATGTTTCTCCATTGAATTAATGAAATGAGATTAAATGCCCATTTGAATTAACTTAAGGAAAAAAATGTTTTTCAAAAAACTTGTTTTTGTTTAAACACTTCTGACAAAATTAGTATTTAGGATTTCAGCATTATTCCTCTCTGATACCATATTGAAAGTAACGACAAAAAACTAACACAAGATTTATGTGGAAACCCTAGTATAAGGTGAAAGGCCACGGGAGAGAGTTTTCTTATTATTTACTTATACAATAAATAATTCAAGGGGGAAATTTAAAAGGCAACAAGAGCCTAATCGAAAAAGGAAAGAATAATTAGGGTAACATAAATTACAAAACTACCCTTAGGCTCTCAACATTCAACAAACCCACTAATTCTAAGAAAAAGTTTAGGGCCTATTCAGAACAGAATCGAAAGTTCAAGGACCTTTGAATATTTTTCTTTTAAGGATTTGGTACCTATTGAACACAATATTGAAAATTTAGGGACTTCTAGACATTTTTCGAAGTTAGAGATCAAATAGATAAAACCTTGAAAGTTCACAATTTGTAATTGGTCATAACTTTTAATGTGCTTTTTATAAGTATGTCTTTTTGTGTATATTCTCTTGTGAGAGTTTCTGTTACATGTTGGGAGATCGATTGTATTTACTTTATCGTGATTATTAGTAGATATTCATGTTGGAGTCTCCTAGTACGCTTTTTTTTTCTGATGGACTATATACTTCATGGCAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGTAAGTTATCATGCTTTTTTCGCTGGCGGAGCTTTTAGTATTTCTTCATTGAATTTCAAGTAGCAATAAAACGTCCGTTGCCTTTCTGATTTTACTTAGACGCTCATTTTCTTGAGATAATCAGTTGGCAGATTTTCATTTTGTGTCATGTCCACCAATTGAACAGTGGACAACAATATCACTAACAGCGTTGTTGGTGCCATTTATCGACAATAAATTCCATGCATTTCTCCTGGTAACTAAACTAGTTCACTCCTCAGTGACACAGGAGCGTGCATGCTCGTATTATGGATTTTAGTTCTGCAAACTTGTACAGTTATACATGATTTAAAAATTTTCATCTGGATTGGAATTCTTTCAGGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAGACTTTCTTGTCTCCAAAAATTTTCTTTTGTTTTGTTATTGTTTTCTTGGGCCAACCATGAAGAACAGAACTCGAATGATATGCACATGATAGGGATATGGTTGTTACTTATTGTAAATCGTTAAAATTGAAGAGGTTTTGCTTGGAAACACTTCTGAATCTGTTCTATAGTACTCCAAGATGGCGGAATTGGATTCTGTTAGTTTGATCCAGGTTTTCTTAATGACACCTGATTCACAATTTGGAGTTAGGGGTGTAAATGG

mRNA sequence

ATGGCCTTGAAGGAAAAGGGAATTTCTGCTGAATATTTATCCTCGACTCAGTCAACACAGGCCAAAAATAAAATTCACGAAGATCTCAATTCTAGTAAACCTACTTTAAGGCTTCTCTATGTTACGCCTGAATTAATTGCAACATCAGGATTCATGGCAAAATTGATGAAAATTTATTCTAGAGGATTACTAAATCTGATTGCTATAGACGAGGCTCATTGTATTTCAACATGGGGCCATGACTTCAGGCCTAGCTACCGCAAGCTTTCCTCTTTGAGGAGTCAACTTCCTAATATTCCTATACTGGCTTTGACGGCTACTGCTGTTCCTAAAGTGCAGAAAGATGTGATAATATCCTTGGGCTTGGAAAACCCTCTAGTTCTTAAGTCTTCATTTAATCGTCCTAACATATATTATGAAGTTCGATACAAAGATCTTTTGGATGATCCACTTGCCGATTTGTGTAATCAACTGAAATCTAGTGGAGATGTTTGTGCAATCATCTATTGCCTAGAGCGTGCAATGTGCGATCAATTGTCAGTTTATCTAGCAAAATATGGCATTTCATGCGCTGCTTATCATGCGGGTTTGAAGAATGAGTTGAGGAAGTCTGTTTTAGAGGATTGGATAAGCTCTAGGATACAAGTTGTTGTGGCCACAGTAGCTTTTGGGATGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGATGATACTGAGGTTGTCAAAAGCCTAACTGGGATGAAGTCTCTAAAGAAATCAGGACTAAATGAAAAGATGGCACTTCTAGAGCGTGCAGAAGCAAACTATTACCAGAACAAGATTTCAGTTAAACAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAG

Coding sequence (CDS)

ATGGCCTTGAAGGAAAAGGGAATTTCTGCTGAATATTTATCCTCGACTCAGTCAACACAGGCCAAAAATAAAATTCACGAAGATCTCAATTCTAGTAAACCTACTTTAAGGCTTCTCTATGTTACGCCTGAATTAATTGCAACATCAGGATTCATGGCAAAATTGATGAAAATTTATTCTAGAGGATTACTAAATCTGATTGCTATAGACGAGGCTCATTGTATTTCAACATGGGGCCATGACTTCAGGCCTAGCTACCGCAAGCTTTCCTCTTTGAGGAGTCAACTTCCTAATATTCCTATACTGGCTTTGACGGCTACTGCTGTTCCTAAAGTGCAGAAAGATGTGATAATATCCTTGGGCTTGGAAAACCCTCTAGTTCTTAAGTCTTCATTTAATCGTCCTAACATATATTATGAAGTTCGATACAAAGATCTTTTGGATGATCCACTTGCCGATTTGTGTAATCAACTGAAATCTAGTGGAGATGTTTGTGCAATCATCTATTGCCTAGAGCGTGCAATGTGCGATCAATTGTCAGTTTATCTAGCAAAATATGGCATTTCATGCGCTGCTTATCATGCGGGTTTGAAGAATGAGTTGAGGAAGTCTGTTTTAGAGGATTGGATAAGCTCTAGGATACAAGTTGTTGTGGCCACAGTAGCTTTTGGGATGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGATGATACTGAGGTTGTCAAAAGCCTAACTGGGATGAAGTCTCTAAAGAAATCAGGACTAAATGAAAAGATGGCACTTCTAGAGCGTGCAGAAGCAAACTATTACCAGAACAAGATTTCAGTTAAACAGAATGATAAACATGACAAGAATAGTGTATCTACATCACTTAGGAAAGCTAGCAGGGAGAGATTAGAGAATTCTCTAGAGCAGGCTCAGCAACGGCTTGGGAGCACCAAGATTGAAGTGGAAAGATATGCTTGTTTTCTTGAGCATGAGTGCTACGAGAAGTATGGAAGAACAGGGAAATCATTCTATTATTCACAAGTTGCTAGTACAGTGCGGTGGCTGTGGACAGCAAGTTCTACAGAGTTGACCAATCGGCTTAGCATCGCTGATAACCCTTCTTCAGAGAAGAATAGAGAACTTCCTGCATTGCCATCTCCATCCCCAGTGTTGGATCTCGCGAAGTTAGCAATGAAAAATGAAGAATTTTGTAGCAGCAACCTAGTTTTGGAAACTTCAGCGACTAATGTGGCAGAGCGAAAGGCTTCCCCTGCAGTTTCTTTGCCTTCAATTCCTTCCTTCTCAGAATTTGTTAATGGTATAAAGGAAGAGGCGAATCAATCAAATAAATCACATGGGCACTCGCTCGACAGAGATGAAAAGGATCCAGTGAAGAAGGCAAGGTTGGGGTAG

Protein sequence

MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISLGLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPSSEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG*

Homology

[Close]

BLAST of Csa2G00090 vs. Swiss-Prot
Match: RQL3_ARATH (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 3.0e-201
Identity = 373/639 (58.37%), Postives = 468/639 (73.24%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AEYLSSTQ+T  KNKIHEDL+S KP++RLLYVTPELIAT GFM KL K++S
Sbjct: 94  MALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCIS+WGHDFRPSYR+LS+LR  L ++P+LALTATA PKVQKDVI SL
Sbjct: 154 RGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            L NPLVLKSSFNRPNI+YEVRYKDLLD+   DL N LKS G++CAIIYCLER  CD LS
Sbjct: 214 NLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           V+L+  GIS AAYHAGL +++R +VL+DW+SS+ Q++VATVAFGMGID+KDVR+VCHFNI
Sbjct: 274 VHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN  S +KK   SSSS     
Sbjct: 334 PKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN--SENKK---SSSS----- 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           +K  +DF Q+V YCEGS CRRK+ILESFGE+ P   C ++CDACKHPN +A  LEEL T+
Sbjct: 394 KKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTT 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           A RR+NSS     S +N  +E ++SEFWN  ++ S S E+IS+SDD TE   S+TG K  
Sbjct: 454 ASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNSNEEISDSDDATEAANSVTGPKLS 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KK GL+EK+ LLE+AE  YY+     KQ  K +KN++S +LR +S++RL ++L +  Q L
Sbjct: 514 KKLGLDEKLVLLEQAEEKYYERN---KQVKKSEKNAISEALRDSSKQRLLDALTRVLQLL 573

Query: 481 GST-KIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNP 540
               +I+ ++ + FLE+ECY KY + GKSFYYSQ+ASTVRWL TAS  EL  RLS   + 
Sbjct: 574 ACVEEIDSQKGSEFLENECYRKYSKAGKSFYYSQIASTVRWLGTASRDELMTRLSSVVSL 633

Query: 541 SSEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVS---LPS 600
           + E+      L +  PV ++     + E+   +N V         E   SP +S   LP 
Sbjct: 634 AREQEPLEEPLLATEPVENI-----EEEDDGKTNTVESRVDEPTQELVVSPILSPIRLPQ 693

Query: 601 IPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARL 636
           +PSFSEFVN  + +  Q+      S   D+K P K  +L
Sbjct: 694 VPSFSEFVN--RRKIKQNTLIDKSSEGFDDKKPAKIMKL 712

[Close]

BLAST of Csa2G00090 vs. Swiss-Prot
Match: RECQ5_HUMAN (ATP-dependent DNA helicase Q5 OS=Homo sapiens GN=RECQL5 PE=1 SV=2)

HSP 1 Score: 288.9 bits (738), Expect = 1.4e-76
Identity = 149/360 (41.39%), Postives = 219/360 (60.83%), Query Frame = 1


Query: 13  LSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYSRGLLNLIAIDEA 72
           L+S  S Q + ++  DL   KP  ++LY+TPE+ A+S F   L  + SR LL+ + +DEA
Sbjct: 100 LNSKLSAQERKELLADLEREKPQTKILYITPEMAASSSFQPTLNSLVSRHLLSYLVVDEA 159

Query: 73  HCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISLGLENPL-VLKSS 132
           HC+S WGHDFRP Y +L +LRS+L + P +ALTATA P+VQ+DV  +L L+ P+ + K+ 
Sbjct: 160 HCVSQWGHDFRPDYLRLGALRSRLGHAPCVALTATATPQVQEDVFAALHLKKPVAIFKTP 219

Query: 133 FNRPNIYYEVRYKDLLDDP---LADLCNQLKSSGDV-------CAIIYCLERAMCDQLSV 192
             R N++Y+V++K+L+ DP   L D C  LK+ G         C I+YC  R  C+QL++
Sbjct: 220 CFRANLFYDVQFKELISDPYGNLKDFC--LKALGQEADKGLSGCGIVYCRTREACEQLAI 279

Query: 193 YLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNIP 252
            L+  G++  AYHAGLK   R  V  DW+  ++ V+VAT++FGMG+D+ +VR V H+NI 
Sbjct: 280 ELSCRGVNAKAYHAGLKASERTLVQNDWMEEKVPVIVATISFGMGVDKANVRFVAHWNIA 339

Query: 253 KSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPE 312
           KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L      +   +
Sbjct: 340 KSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVAK----LQEKRGNKASDK 399

Query: 313 KSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSA 362
            ++  F  +V +CE   CR   I + FG+ +PA  C++ CD C++P  +   LE L  S+
Sbjct: 400 ATIMAFDALVTFCEELGCRHAAIAKYFGDALPA--CAKGCDHCQNPTAVRRRLEALERSS 451

[Close]

BLAST of Csa2G00090 vs. Swiss-Prot
Match: RECQ5_MOUSE (ATP-dependent DNA helicase Q5 OS=Mus musculus GN=Recql5 PE=1 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.5e-75
Identity = 177/519 (34.10%), Postives = 273/519 (52.60%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           +ALK   +    L+S  S Q + ++  DL   KP  +LLY+TPE+ A++ F   L  + S
Sbjct: 91  LALK---VQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLVS 150

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           R LL+ + +DEAHC+S WGHDFRP Y +L +LRS+L + P +ALTATA P+VQ+DV  +L
Sbjct: 151 RNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAAL 210

Query: 121 GLENPLV-LKSSFNRPNIYYEVRYKDLLDDP---LADLCNQL------KSSGDVCAIIYC 180
            L+ P+   K+   R N++Y+V++K+L+ D    L D C +         S   C I+YC
Sbjct: 211 HLKQPVASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIVYC 270

Query: 181 LERAMCDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRK 240
             R  C+QL++ L+  G++  AYHAGLK   R  V  +W+  ++ V+VAT++FGMG+D+ 
Sbjct: 271 RTREACEQLAIELSSRGVNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKA 330

Query: 241 DVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKIL 300
           +VR V H+NI KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L
Sbjct: 331 NVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAK----L 390

Query: 301 PSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNII 360
                 +   + +L  F  +V +CE   CR   I + FG+  PA  C++ CD C++P  I
Sbjct: 391 QEKRGNKPSDKATLLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDYCQNPAAI 450

Query: 361 AAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDE---------FSEFWNLKDEASESGEDI 420
              L+     A+ R++S S+  +  S  +  D          +  F    + +  SG++ 
Sbjct: 451 TKKLD-----ALERSSSWSKTCIGPSQGNGFDPELYEGGRRGYGGFSRYDEGSGGSGDEG 510

Query: 421 SNSDDDTEVVKSLTGMKSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSL 480
            +     E         SL+K G   K+      + +    + S ++  K     ++   
Sbjct: 511 RDEAHKREWNLFYQKQMSLRK-GKEPKIEEFTPPDEDCPLREASSRKIPK-----LTVKA 570

Query: 481 RKASRERLENSLEQAQQRLGSTK-IEVERYACFLEHECY 500
           R+     LE +L    Q  GST   +++  A  LEHE +
Sbjct: 571 REHCLRLLEEALISNHQAAGSTHGADLQAKAVELEHETF 589

[Close]

BLAST of Csa2G00090 vs. Swiss-Prot
Match: RECQ5_RAT (ATP-dependent DNA helicase Q5 OS=Rattus norvegicus GN=Recql5 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.4e-75
Identity = 149/371 (40.16%), Postives = 218/371 (58.76%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           +ALK   +    L+S  S Q + ++  DL   KP  +LLY+TPE+ A++ F   L  + S
Sbjct: 91  LALK---VQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPEMAASASFQPTLNSLLS 150

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           R LL+ + +DEAHC+S WGHDFRP Y +L +LRS+L + P +ALTATA P+VQ+DV  +L
Sbjct: 151 RNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDVFAAL 210

Query: 121 GLENPLV-LKSSFNRPNIYYEVRYKDLLDDP---LADLCNQL------KSSGDVCAIIYC 180
            L+ P+   K+   R N++Y+V++K+L+ D    L D C +         S   C I+YC
Sbjct: 211 HLKQPVASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKADNGSSSGCGIVYC 270

Query: 181 LERAMCDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRK 240
             R  C+QL++ L+  G++  AYHAGLK   R  V  +W+  ++ V+VAT++FGMG+D+ 
Sbjct: 271 RTREACEQLAIELSSRGVNAKAYHAGLKASERTQVQNEWMEEKVPVIVATISFGMGVDKA 330

Query: 241 DVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKIL 300
           +VR V H+NI KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +     L
Sbjct: 331 NVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAK----L 390

Query: 301 PSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNII 360
                 +   + +L  F  +V +CE   CR   I + FG+  PA  C++ CD C+ P  I
Sbjct: 391 QEKRGNKPSDKATLLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDCCQSPAAI 450

Query: 361 AAYLEELTTSA 362
              L+ L  S+
Sbjct: 451 RKKLDALEHSS 452

[Close]

BLAST of Csa2G00090 vs. Swiss-Prot
Match: BLM_CAEEL (Bloom syndrome protein homolog OS=Caenorhabditis elegans GN=him-6 PE=2 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 1.2e-69
Identity = 152/375 (40.53%), Postives = 213/375 (56.80%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLM-KIY 60
           M +KE GI  E L++     A+ KI+ +L S  P+++LLYVTPE I+ SG +  +   ++
Sbjct: 305 MKMKELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKISASGRLNSVFFDLH 364

Query: 61  SRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPN--IPILALTATAVPKVQKDVI 120
            RGLL    IDEAHC+S WGHDFRP Y KLSSLR +  N  +PI+ALTATA PK+  D  
Sbjct: 365 RRGLLARFVIDEAHCVSQWGHDFRPDYTKLSSLREKYANPPVPIIALTATATPKIVTDAR 424

Query: 121 ISLGLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDV----CAIIYCLER 180
             L ++N  +  SSF R N+ Y     DL+      L N ++    +      I+YCL R
Sbjct: 425 DHLKMQNSKLFISSFVRDNLKY-----DLIPKAARSLINVVEKMKQLYPGKSGIVYCLSR 484

Query: 181 AMCDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVR 240
             C+ + + L K G+S   YHAGL + LR SV   WI+++  V+ AT+AFGMGID+ DVR
Sbjct: 485 KECETVQMMLTKAGLSAEVYHAGLNDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVR 544

Query: 241 VVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSS 300
            V H+++PKS+E +YQE+GRAGRD +PS  L+ Y   D  R+           ++++   
Sbjct: 545 FVIHYSLPKSIEGYYQETGRAGRDGMPSYCLMLYSYHDSIRL-----------RRMIEEG 604

Query: 301 SSQEKQPEKSLTDFTQMVEYCEG-SRCRRKQILESFGEQVPASICSRS---CDAC--KHP 360
           ++        L +  Q+V YCE  S CRRK ++E FGE      C  S   CD C  +  
Sbjct: 605 NTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVYDEQSCRNSKTPCDICERQRK 663

Query: 361 NIIAAYLEELTTSAV 363
           N  A  L +++T A+
Sbjct: 665 NAEAIRLFDVSTDAL 663

[Close]

BLAST of Csa2G00090 vs. TrEMBL
Match: A0A0A0LES3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G00090 PE=4 SV=1)

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL
Sbjct: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
           GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP
Sbjct: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS
Sbjct: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL
Sbjct: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL
Sbjct: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480

Query: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540
           GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS
Sbjct: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540

Query: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600
           SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF
Sbjct: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600

Query: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 637
           SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG
Sbjct: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 636

[Close]

BLAST of Csa2G00090 vs. TrEMBL
Match: A0A061DFK3_THECC (DEAD/DEAH box RNA helicase family protein OS=Theobroma cacao GN=TCM_000111 PE=4 SV=1)

HSP 1 Score: 790.8 bits (2041), Expect = 1.2e-225
Identity = 419/659 (63.58%), Postives = 508/659 (77.09%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AE+LSSTQ++Q KNKIHEDL+S +P+LRLLYVTPELIATSGFM+KL KI+ 
Sbjct: 95  MALKEKGIAAEFLSSTQTSQVKNKIHEDLDSGQPSLRLLYVTPELIATSGFMSKLTKIHG 154

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIA+DEAHCIS+WGHDFRPSY KLSSLR+ LP++ ILALTATAVPKVQKDVI SL
Sbjct: 155 RGLLNLIAVDEAHCISSWGHDFRPSYSKLSSLRNSLPDVAILALTATAVPKVQKDVIDSL 214

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            L+NPL+LKSSFNRPNIYYEVRYKDLLDD  ADLCN LKS+GDVC I+YCLERA CD LS
Sbjct: 215 NLQNPLILKSSFNRPNIYYEVRYKDLLDDGYADLCNVLKSAGDVCGIVYCLERATCDDLS 274

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFG---------------- 240
            +L++ GISCAAYHAGL N+ R SVL+DW SS+IQVVVATVAFG                
Sbjct: 275 THLSRNGISCAAYHAGLNNKSRSSVLDDWSSSKIQVVVATVAFGCTNLFIFERLLKRICS 334

Query: 241 --MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNR 300
             MGIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQLPS+SLLYYG++DR+RMEFIL   
Sbjct: 335 FRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGMDDRKRMEFIL--- 394

Query: 301 SSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCD 360
           SSA+ K L SS+SQ    +KS++DF  MVEYCEGSRCRRK+ILESFGE+V A +C +SCD
Sbjct: 395 SSAESKKLQSSNSQHGFSKKSMSDFNLMVEYCEGSRCRRKKILESFGEEVSALLCKKSCD 454

Query: 361 ACKHPNIIAAYLEELTTS-AVRRNNSSSRIFVSRSNTD--DEDEFSEFWNLKDEASESGE 420
           ACKHPN+I   LEEL ++ AVR+ N  SRI +S S+TD  D  +FSEFWN  DEAS S E
Sbjct: 455 ACKHPNLITKCLEELASACAVRQRNGFSRILMS-SSTDAIDNAQFSEFWNHDDEASGSEE 514

Query: 421 DISNSDDDTEVVKSLTGMKSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVST 480
           DIS+SDD  E+ KS++  K  KKSG+NEK+  L+RAE NYYQNK   KQ +K DKN++S 
Sbjct: 515 DISDSDDGFELAKSISRCKVSKKSGINEKIEFLQRAEENYYQNKAPDKQTNKPDKNAISE 574

Query: 481 SLRKASRERLENSLEQAQQRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVR 540
            LR++S++RL ++L+QA QRLG  K++ E  + FLE EC++KYG++GKSFYYSQVASTVR
Sbjct: 575 MLRESSKQRLLDALKQAHQRLGDLKVDFEASSTFLESECFKKYGKSGKSFYYSQVASTVR 634

Query: 541 WLWTASSTELTNRLSIADNPSSEKN---RELPALPSPSPVLDLAKLAMKNEEFCSSNLVL 600
           WL T SS E+TNR  +A   +S +N   +E P L + +  +   K  +  E+ C  N+ L
Sbjct: 635 WLSTTSSVEITNR--VATGTTSHENSTHKENPPLTASTKFVQREK-EIIGEQHC-GNIEL 694

Query: 601 ETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARL 636
           ETSA+ +  +  SP+  LP+IPSFS+FVN  K +  Q N S  HS    E +  K+ RL
Sbjct: 695 ETSASALPLQNPSPSAKLPTIPSFSQFVNNRKSKETQPNASEKHSPKNLETNMKKRMRL 745

[Close]

BLAST of Csa2G00090 vs. TrEMBL
Match: U5GEU8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10920g PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 6.1e-225
Identity = 415/661 (62.78%), Postives = 503/661 (76.10%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AE+LSSTQ++  +NKIHEDL+S KP++RLLYVTPELIAT GFM+KL KI++
Sbjct: 95  MALKEKGIAAEFLSSTQTSSVRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHT 154

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCIS+WGHDFRPSYRKLSSLR+ LP++P+LALTATA PKVQ DVI SL
Sbjct: 155 RGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESL 214

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            L++PLVL SSFNRPNIYYEVRYKDLLDD  ADL + LKS GD+CAI+YCLER  CD LS
Sbjct: 215 CLQDPLVLSSSFNRPNIYYEVRYKDLLDDAYADLSSVLKSCGDICAIVYCLERTTCDGLS 274

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
            +L+K GIS AAYHAGL N+LR SVL+DWISS+IQVVVATVAFGMGIDRKDVR+VCHFNI
Sbjct: 275 AHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNI 334

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSME+FYQESGRAGRDQLPS+SLLYYG++D ++MEFILRN   A+ K L SSSS+ +  
Sbjct: 335 PKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILRN---AENKKLQSSSSKGELS 394

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           +KSLTDF  M+EYCEGS CRRK+ILESFGEQV A++C +SCDACKHPN++A YLEELTTS
Sbjct: 395 KKSLTDFNLMIEYCEGSGCRRKKILESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTS 454

Query: 361 AVRRNNSSSRIFVSRSN--TDDE----DEFSEFWNLKDEASESGEDISNSDDDTEVVKSL 420
             R+ N  SR+F+SRS    D+E    ++FSEFWN  DE   S EDIS+ DD+TEVVKSL
Sbjct: 455 IARQRNGFSRVFMSRSTDMIDEEFRIDEQFSEFWNRDDEGKSSEEDISDFDDETEVVKSL 514

Query: 421 TGMKSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLE 480
              +  +KSG++EK+ LL+RAE NYYQNK   K  +K DKN++S +LR+AS++RL N+L+
Sbjct: 515 PRSRLSRKSGVDEKIELLQRAEENYYQNKNFDKLKNKVDKNAISETLREASKQRLLNALK 574

Query: 481 QAQQRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLS 540
            A +RLG   IE++  A FLE+ECY+KYG++GK+FYYSQVASTVRWL + +  ELTNRL 
Sbjct: 575 LAHKRLGILNIELDTSASFLENECYKKYGKSGKTFYYSQVASTVRWLSSTTLVELTNRLG 634

Query: 541 IADNPSSEKNRELPALPSPSPVLDLAK----------------LAMKNEEFCSSNL---- 600
               PS   ++E P    PSP+L+                   L  K+ E  +  L    
Sbjct: 635 -PGTPSVPVSKEHPPETPPSPLLEQRPPETTNLKRHSSFHSPLLEQKSPETTTPRLDHTF 694

Query: 601 VLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKAR 636
             ETS        +S +  LPSIPSFSEFVN  KE+ N +N S   S  R EK   K+ R
Sbjct: 695 QSETSMNTSPSESSSLSTKLPSIPSFSEFVNSKKEKGNHANTSQNQSHMRLEKTGEKRLR 751

[Close]

BLAST of Csa2G00090 vs. TrEMBL
Match: U5GBL6_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10920g PE=4 SV=1)

HSP 1 Score: 788.5 bits (2035), Expect = 6.1e-225
Identity = 415/661 (62.78%), Postives = 503/661 (76.10%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AE+LSSTQ++  +NKIHEDL+S KP++RLLYVTPELIAT GFM+KL KI++
Sbjct: 1   MALKEKGIAAEFLSSTQTSSVRNKIHEDLDSGKPSVRLLYVTPELIATPGFMSKLTKIHT 60

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCIS+WGHDFRPSYRKLSSLR+ LP++P+LALTATA PKVQ DVI SL
Sbjct: 61  RGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRNHLPDVPVLALTATAAPKVQNDVIESL 120

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            L++PLVL SSFNRPNIYYEVRYKDLLDD  ADL + LKS GD+CAI+YCLER  CD LS
Sbjct: 121 CLQDPLVLSSSFNRPNIYYEVRYKDLLDDAYADLSSVLKSCGDICAIVYCLERTTCDGLS 180

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
            +L+K GIS AAYHAGL N+LR SVL+DWISS+IQVVVATVAFGMGIDRKDVR+VCHFNI
Sbjct: 181 AHLSKNGISSAAYHAGLNNKLRSSVLDDWISSKIQVVVATVAFGMGIDRKDVRMVCHFNI 240

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSME+FYQESGRAGRDQLPS+SLLYYG++D ++MEFILRN   A+ K L SSSS+ +  
Sbjct: 241 PKSMESFYQESGRAGRDQLPSRSLLYYGVDDHKKMEFILRN---AENKKLQSSSSKGELS 300

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           +KSLTDF  M+EYCEGS CRRK+ILESFGEQV A++C +SCDACKHPN++A YLEELTTS
Sbjct: 301 KKSLTDFNLMIEYCEGSGCRRKKILESFGEQVSATLCKKSCDACKHPNLVAKYLEELTTS 360

Query: 361 AVRRNNSSSRIFVSRSN--TDDE----DEFSEFWNLKDEASESGEDISNSDDDTEVVKSL 420
             R+ N  SR+F+SRS    D+E    ++FSEFWN  DE   S EDIS+ DD+TEVVKSL
Sbjct: 361 IARQRNGFSRVFMSRSTDMIDEEFRIDEQFSEFWNRDDEGKSSEEDISDFDDETEVVKSL 420

Query: 421 TGMKSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLE 480
              +  +KSG++EK+ LL+RAE NYYQNK   K  +K DKN++S +LR+AS++RL N+L+
Sbjct: 421 PRSRLSRKSGVDEKIELLQRAEENYYQNKNFDKLKNKVDKNAISETLREASKQRLLNALK 480

Query: 481 QAQQRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLS 540
            A +RLG   IE++  A FLE+ECY+KYG++GK+FYYSQVASTVRWL + +  ELTNRL 
Sbjct: 481 LAHKRLGILNIELDTSASFLENECYKKYGKSGKTFYYSQVASTVRWLSSTTLVELTNRLG 540

Query: 541 IADNPSSEKNRELPALPSPSPVLDLAK----------------LAMKNEEFCSSNL---- 600
               PS   ++E P    PSP+L+                   L  K+ E  +  L    
Sbjct: 541 -PGTPSVPVSKEHPPETPPSPLLEQRPPETTNLKRHSSFHSPLLEQKSPETTTPRLDHTF 600

Query: 601 VLETSATNVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKAR 636
             ETS        +S +  LPSIPSFSEFVN  KE+ N +N S   S  R EK   K+ R
Sbjct: 601 QSETSMNTSPSESSSLSTKLPSIPSFSEFVNSKKEKGNHANTSQNQSHMRLEKTGEKRLR 657

[Close]

BLAST of Csa2G00090 vs. TrEMBL
Match: I1L1R3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2)

HSP 1 Score: 779.2 bits (2011), Expect = 3.7e-222
Identity = 415/646 (64.24%), Postives = 503/646 (77.86%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AE+LSST++T AK KIHEDL+S KP+ RLLYVTPELI T GFM KL KIY+
Sbjct: 96  MALKEKGIAAEFLSSTKTTDAKVKIHEDLDSGKPSTRLLYVTPELITTPGFMTKLTKIYT 155

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCIS+WGHDFRPSYRKLSSLRS LP++PILALTATAVPKVQKDV+ SL
Sbjct: 156 RGLLNLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAVPKVQKDVVESL 215

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            ++NPL+LKSSFNRPNIYYEVRYKDLLDD  ADL N LKS GDVCAI+YCLER+MCD LS
Sbjct: 216 QMQNPLMLKSSFNRPNIYYEVRYKDLLDDAYADLSNTLKSLGDVCAIVYCLERSMCDDLS 275

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
             L++ GISCAAYHAGL N++R SVL+DWISS+I+VVVATVAFGMGIDRKDVR+VCHFNI
Sbjct: 276 TNLSQNGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGMGIDRKDVRIVCHFNI 335

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPS+SLLYYG++DR+RMEFILR   S   K   SSSSQE+  
Sbjct: 336 PKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMEFILRKSVS---KKSQSSSSQEESS 395

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           + SL  F  MVEYCEGS CRRK++LESFGEQV AS+C ++CD C+HPN++A YLE+LTT+
Sbjct: 396 KMSLIAFNLMVEYCEGSGCRRKRVLESFGEQVTASLCGKTCDGCRHPNLVARYLEDLTTA 455

Query: 361 -AVRRNNSSSRIFVSRSNTD--DEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGM 420
            A+R+ N SSR+F++ S+TD  + ++ SEFWN  +EAS S EDIS+SDD  EVV +LT  
Sbjct: 456 CALRQKNGSSRVFMT-SSTDAINGEQLSEFWNQDEEASGSEEDISDSDDGNEVVNNLTRS 515

Query: 421 KSLKKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQ 480
           K   K G++EK+A+L+RAE N+Y+N  + KQ++K DKN++S  +R +SR+RL+N+L+Q Q
Sbjct: 516 KLQSKLGVSEKLAMLQRAEENFYRNNNAYKQSNKVDKNAISDPMRGSSRQRLQNALKQVQ 575

Query: 481 QRLGSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIAD 540
           QRL + KIE+E  A FLE ECY+KYG+ GKSFYYSQVASTVRWL TASS+EL NRLS  +
Sbjct: 576 QRLDNFKIEMETSASFLEEECYKKYGKVGKSFYYSQVASTVRWLTTASSSELINRLSAIN 635

Query: 541 NPSS------EKNRELPA----------LPSPSPVLDLAKLAMKNEEFCSSNLVLETSAT 600
             +S       +N  +PA          L SP P LD       NE   S     ETSA 
Sbjct: 636 ASTSMNVLSEAENLLIPANQPLTPAEQPLTSP-PALDPYARDTSNEH--SGTARSETSAC 695

Query: 601 NVAERKASPAVSLPSIPSFSEFVNGIKEEANQSNKSHGHSLDRDEK 628
            V   + S + +LP IPSFSEFVN  K + +Q + +  HS   ++K
Sbjct: 696 -VLPMEGSFSTNLPQIPSFSEFVNSRKAKGDQLHDTKRHSSRVEKK 733

[Close]

BLAST of Csa2G00090 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 703.0 bits (1813), Expect = 1.7e-202
Identity = 373/639 (58.37%), Postives = 468/639 (73.24%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGI+AEYLSSTQ+T  KNKIHEDL+S KP++RLLYVTPELIAT GFM KL K++S
Sbjct: 94  MALKEKGIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRKLHS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCIS+WGHDFRPSYR+LS+LR  L ++P+LALTATA PKVQKDVI SL
Sbjct: 154 RGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVIDSL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            L NPLVLKSSFNRPNI+YEVRYKDLLD+   DL N LKS G++CAIIYCLER  CD LS
Sbjct: 214 NLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKSCGNICAIIYCLERTTCDDLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           V+L+  GIS AAYHAGL +++R +VL+DW+SS+ Q++VATVAFGMGID+KDVR+VCHFNI
Sbjct: 274 VHLSSIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN  S +KK   SSSS     
Sbjct: 334 PKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN--SENKK---SSSS----- 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           +K  +DF Q+V YCEGS CRRK+ILESFGE+ P   C ++CDACKHPN +A  LEEL T+
Sbjct: 394 KKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDACKHPNQVAHCLEELMTT 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           A RR+NSS     S +N  +E ++SEFWN  ++ S S E+IS+SDD TE   S+TG K  
Sbjct: 454 ASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNSNEEISDSDDATEAANSVTGPKLS 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KK GL+EK+ LLE+AE  YY+     KQ  K +KN++S +LR +S++RL ++L +  Q L
Sbjct: 514 KKLGLDEKLVLLEQAEEKYYERN---KQVKKSEKNAISEALRDSSKQRLLDALTRVLQLL 573

Query: 481 GST-KIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNP 540
               +I+ ++ + FLE+ECY KY + GKSFYYSQ+ASTVRWL TAS  EL  RLS   + 
Sbjct: 574 ACVEEIDSQKGSEFLENECYRKYSKAGKSFYYSQIASTVRWLGTASRDELMTRLSSVVSL 633

Query: 541 SSEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVS---LPS 600
           + E+      L +  PV ++     + E+   +N V         E   SP +S   LP 
Sbjct: 634 AREQEPLEEPLLATEPVENI-----EEEDDGKTNTVESRVDEPTQELVVSPILSPIRLPQ 693

Query: 601 IPSFSEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARL 636
           +PSFSEFVN  + +  Q+      S   D+K P K  +L
Sbjct: 694 VPSFSEFVN--RRKIKQNTLIDKSSEGFDDKKPAKIMKL 712

[Close]

BLAST of Csa2G00090 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-68
Identity = 153/392 (39.03%), Postives = 220/392 (56.12%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAK-LMKIY 60
           M L +  I A  LS+      + KI ++LNS     +LLYVTPE +A S  + + L  + 
Sbjct: 511 MNLLQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLENLN 570

Query: 61  SRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIIS 120
           SRGLL    IDEAHC+S WGHDFRP Y+ L  L+ + PNIP+LALTATA   V++DV+ +
Sbjct: 571 SRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDVVQA 630

Query: 121 LGLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSG-DVCAIIYCLERAMCDQ 180
           LGL N +V + SFNRPN++Y V  K      L D+   +K +  D C IIYCL R  C++
Sbjct: 631 LGLVNCVVFRQSFNRPNLWYSVVPKT--KKCLEDIDKFIKENHFDECGIIYCLSRMDCEK 690

Query: 181 LSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHF 240
           +S  L ++G   A YH  ++ E R  +   W    I ++ ATVAFGMGI++ DVR V H 
Sbjct: 691 VSERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVIHH 750

Query: 241 NIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSS----S 300
           ++PKS+E ++QE GRAGRD   S  +LYYG  D  R++ ++ ++   D+  + +     +
Sbjct: 751 SLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI-SQGGVDQSPMATGYNRVA 810

Query: 301 SQEKQPEKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSRSCDAC--------K 360
           S  +  E +  +  +MV YCE    CRR   L   GE+  ++ C ++CD C        K
Sbjct: 811 SSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNCCSSQSLIDK 870

Query: 361 HPNIIAAYLEELTTSAVRRNNSSSRIFVSRSN 378
              +I   L EL      R +S+  + V R +
Sbjct: 871 DVTLITRQLVELVKQTGERFSSAHILEVYRGS 899

[Close]

BLAST of Csa2G00090 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 256.5 bits (654), Expect = 4.2e-68
Identity = 145/350 (41.43%), Postives = 206/350 (58.86%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSG-FMAKLMKIY 60
           M L   GISA  L+ST   + +  +++ L   +  L++LYVTPE ++ S  FM+KL K +
Sbjct: 147 MGLAALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKLEKCH 206

Query: 61  SRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIIS 120
           + G L+LI+IDEAHC S WGHDFRP Y+ LS L++Q P +P++ALTATA  KVQ D+I  
Sbjct: 207 NAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQNDLIEM 266

Query: 121 LGLENPLVLKSSFNRPNIYYEVRYKD----LLDDPLADLCNQLKSSGDVCAIIYCLERAM 180
           L +   +   SS NRPN++Y VR K     L+ D +A+   +  S+ +   I+YC  R  
Sbjct: 267 LHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNE-SGIVYCFSRKE 326

Query: 181 CDQLSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVV 240
           C+Q++  L + GIS   YHA +   +R+ V   W  +++QV+V TVAFGMGI++ DVR V
Sbjct: 327 CEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFV 386

Query: 241 CHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSS 300
            H ++ KSME +YQESGRAGRD LPS+ +L++                SAD   +P  SS
Sbjct: 387 IHHSLSKSMETYYQESGRAGRDGLPSECILFF---------------RSAD---VPRQSS 446

Query: 301 QEKQPEKSLTDFTQMVEYCEG-SRCRRKQILESFGEQVPASICSRSCDAC 345
                   L +   +V YC+  ++CRR      FGE  P+  C+  CD C
Sbjct: 447 MVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGE--PSQDCNGMCDNC 475

[Close]

BLAST of Csa2G00090 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 244.6 bits (623), Expect = 1.7e-64
Identity = 141/356 (39.61%), Postives = 201/356 (56.46%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIY- 60
           M L +  ISA  LS+      + +I ++L+S K   +LLYVTPE +A S  + + ++I  
Sbjct: 527 MNLLQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILN 586

Query: 61  SRGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIIS 120
           SR LL    IDEAHC+S WGHDFRP Y+ L  L+ + PNIP+LALTATA   V++DV+ +
Sbjct: 587 SRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQA 646

Query: 121 LGLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSG-DVCAIIYCLERAMCDQ 180
           LGL N +V + SFNRPN++Y V  K   +  L D+   ++ +  D C IIYCL R  C++
Sbjct: 647 LGLVNCVVFRQSFNRPNLWYSVVPK--TNKCLEDIDKFIRENHFDECGIIYCLSRMDCEK 706

Query: 181 LSVYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHF 240
           ++  L  +G   A YH  +    R  V + W    I ++ ATVAFGMGI++ DVR V H 
Sbjct: 707 VTEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHH 766

Query: 241 NIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSAD---KKILPSSSS 300
           ++PKS+E ++QE GRAGRD   S  +LYY   D  R++ ++          K      +S
Sbjct: 767 SLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKAS 826

Query: 301 QEKQPEKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSRSCDACKHPNII 351
             +  E +  +  +MV YCE    CRR   L   GE+  ++ C  +CD C    I+
Sbjct: 827 SGRMLETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSKIL 880

[Close]

BLAST of Csa2G00090 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 238.8 bits (608), Expect = 9.1e-63
Identity = 138/346 (39.88%), Postives = 198/346 (57.23%), Query Frame = 1


Query: 7   GISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIA-TSGFMAKLMKIYSRGLLN 66
           GI A +L+S Q++     + ++L    P+ +LLYVTPE IA +S F+  L  +  +GLL 
Sbjct: 271 GIPATFLNSQQTSSQAAAVLQELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLA 330

Query: 67  LIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISLGLENP 126
              +DEAHC+S WGHDFRP YR+L  L+   P +P++ALTATA   V +DV+ SL +   
Sbjct: 331 GFVVDEAHCVSQWGHDFRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRA 390

Query: 127 LVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSS-GDVCAIIYCLERAMCDQLSVYL- 186
            VLK SF+R N+ YEV  K    +PL  L   L+    D   I+YCL ++ C  ++ +L 
Sbjct: 391 PVLKMSFDRINLKYEVIVK--TKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLN 450

Query: 187 AKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNIPKS 246
            K  +    YHAG+  + R  V   W +  +++V AT+AFGMGID+ DVR V H  + K+
Sbjct: 451 EKCKVKTVYYHAGVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKA 510

Query: 247 MEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKS 306
           +E++YQESGRAGRD L ++ +  Y  +D  R+  +LRN    +     S+ +Q K     
Sbjct: 511 VESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAK----- 570

Query: 307 LTDFTQMVEYCE-GSRCRRKQILESFGEQVPASICSRS---CDACK 346
                +M +YCE  + CRR+ +LE FGE     IC  S   CD C+
Sbjct: 571 -----KMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNCE 604

[Close]

BLAST of Csa2G00090 vs. NCBI nr
Match: gi|449446630|ref|XP_004141074.1| (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 94  MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL
Sbjct: 154 RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
           GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 214 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 274 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP
Sbjct: 334 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS
Sbjct: 394 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL
Sbjct: 454 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL
Sbjct: 514 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 573

Query: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540
           GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS
Sbjct: 574 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 633

Query: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600
           SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF
Sbjct: 634 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 693

Query: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 637
           SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG
Sbjct: 694 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 729

[Close]

BLAST of Csa2G00090 vs. NCBI nr
Match: gi|700205381|gb|KGN60500.1| (hypothetical protein Csa_2G00090 [Cucumis sativus])

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 636/636 (100.00%), Postives = 636/636 (100.00%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL
Sbjct: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
           GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP
Sbjct: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS
Sbjct: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL
Sbjct: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL
Sbjct: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480

Query: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540
           GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS
Sbjct: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540

Query: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600
           SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF
Sbjct: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600

Query: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 637
           SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG
Sbjct: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARLG 636

[Close]

BLAST of Csa2G00090 vs. NCBI nr
Match: gi|659071451|ref|XP_008459885.1| (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo])

HSP 1 Score: 1204.1 bits (3114), Expect = 0.0e+00
Identity = 610/635 (96.06%), Postives = 619/635 (97.48%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDL+SSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 94  MALKEKGISAEYLSSTQSTQAKNKIHEDLDSSKPTLRLLYVTPELIATSGFMAKLMKIYS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRS+LPNIPILALTATAVPKVQKDVIISL
Sbjct: 154 RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSRLPNIPILALTATAVPKVQKDVIISL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            LENPLVLKSSFNRPNIYYEVRYKDLLDDP ADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 214 ALENPLVLKSSFNRPNIYYEVRYKDLLDDPFADLCNQLKSSGDVCAIIYCLERAMCDQLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAK+GISCAAYHAGLKNELRKSVLEDWISS+IQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 274 VYLAKHGISCAAYHAGLKNELRKSVLEDWISSKIQVVVATVAFGMGIDRKDVRVVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSSADKKILPSSSSQEKQ 
Sbjct: 334 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQS 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNI+AAYLEELTT 
Sbjct: 394 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTC 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNSDDDTEVVKSLT MKSL
Sbjct: 454 AVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNSDDDTEVVKSLTRMKSL 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KKSGLNEKMALLERAE NYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL
Sbjct: 514 KKSGLNEKMALLERAEENYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 573

Query: 481 GSTKIEVERYACFLEHECYEKYGRTGKSFYYSQVASTVRWLWTASSTELTNRLSIADNPS 540
           GSTKIEVERYACFLEHECYEKYGR GKSFYYSQVASTVRWLWTASSTELTNRLSIADN  
Sbjct: 574 GSTKIEVERYACFLEHECYEKYGRAGKSFYYSQVASTVRWLWTASSTELTNRLSIADNRC 633

Query: 541 SEKNRELPALPSPSPVLDLAKLAMKNEEFCSSNLVLETSATNVAERKASPAVSLPSIPSF 600
           SEKNRELPALPSPSPVLDL KL M NEEFCSSNLVLETSAT VAERKASPAVSLPSIPSF
Sbjct: 634 SEKNRELPALPSPSPVLDLPKLVMSNEEFCSSNLVLETSATKVAERKASPAVSLPSIPSF 693

Query: 601 SEFVNGIKEEANQSNKSHGHSLDRDEKDPVKKARL 636
           SEFVNGIKE+ANQSNKSHGHSL+RDEKDPVK+ RL
Sbjct: 694 SEFVNGIKEKANQSNKSHGHSLNRDEKDPVKRGRL 728

[Close]

BLAST of Csa2G00090 vs. NCBI nr
Match: gi|659071453|ref|XP_008459892.1| (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo])

HSP 1 Score: 923.7 bits (2386), Expect = 1.7e-265
Identity = 469/483 (97.10%), Postives = 475/483 (98.34%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDL+SSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 94  MALKEKGISAEYLSSTQSTQAKNKIHEDLDSSKPTLRLLYVTPELIATSGFMAKLMKIYS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRS+LPNIPILALTATAVPKVQKDVIISL
Sbjct: 154 RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSRLPNIPILALTATAVPKVQKDVIISL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
            LENPLVLKSSFNRPNIYYEVRYKDLLDDP ADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 214 ALENPLVLKSSFNRPNIYYEVRYKDLLDDPFADLCNQLKSSGDVCAIIYCLERAMCDQLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAK+GISCAAYHAGLKNELRKSVLEDWISS+IQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 274 VYLAKHGISCAAYHAGLKNELRKSVLEDWISSKIQVVVATVAFGMGIDRKDVRVVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSSADKKILPSSSSQEKQ 
Sbjct: 334 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSSADKKILPSSSSQEKQS 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNI+AAYLEELTT 
Sbjct: 394 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIVAAYLEELTTC 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNSDDDTEVVKSLT MKSL
Sbjct: 454 AVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNSDDDTEVVKSLTRMKSL 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 480
           KKSGLNEKMALLERAE NYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL
Sbjct: 514 KKSGLNEKMALLERAEENYYQNKISVKQNDKHDKNSVSTSLRKASRERLENSLEQAQQRL 573

Query: 481 GST 484
           GST
Sbjct: 574 GST 576

[Close]

BLAST of Csa2G00090 vs. NCBI nr
Match: gi|778665494|ref|XP_011648575.1| (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 884.4 bits (2284), Expect = 1.2e-253
Identity = 448/449 (99.78%), Postives = 449/449 (100.00%), Query Frame = 1


Query: 1   MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 60
           MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS
Sbjct: 94  MALKEKGISAEYLSSTQSTQAKNKIHEDLNSSKPTLRLLYVTPELIATSGFMAKLMKIYS 153

Query: 61  RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 120
           RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL
Sbjct: 154 RGLLNLIAIDEAHCISTWGHDFRPSYRKLSSLRSQLPNIPILALTATAVPKVQKDVIISL 213

Query: 121 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 180
           GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS
Sbjct: 214 GLENPLVLKSSFNRPNIYYEVRYKDLLDDPLADLCNQLKSSGDVCAIIYCLERAMCDQLS 273

Query: 181 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 240
           VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI
Sbjct: 274 VYLAKYGISCAAYHAGLKNELRKSVLEDWISSRIQVVVATVAFGMGIDRKDVRVVCHFNI 333

Query: 241 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 300
           PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP
Sbjct: 334 PKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQP 393

Query: 301 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 360
           EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS
Sbjct: 394 EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTS 453

Query: 361 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 420
           AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL
Sbjct: 454 AVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDDDTEVVKSLTGMKSL 513

Query: 421 KKSGLNEKMALLERAEANYYQNKISVKQN 450
           KKSGLNEKMALLERAEANYYQNKISVKQ+
Sbjct: 514 KKSGLNEKMALLERAEANYYQNKISVKQD 542

The following BLAST results are available for this feature:

BLAST of Csa2G00090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RQL3_ARATH	3.0e-201	58.37	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana GN=RECQL3 PE=1 SV=1	[more]
RECQ5_HUMAN	1.4e-76	41.39	ATP-dependent DNA helicase Q5 OS=Homo sapiens GN=RECQL5 PE=1 SV=2	[more]
RECQ5_MOUSE	1.5e-75	34.10	ATP-dependent DNA helicase Q5 OS=Mus musculus GN=Recql5 PE=1 SV=1	[more]
RECQ5_RAT	4.4e-75	40.16	ATP-dependent DNA helicase Q5 OS=Rattus norvegicus GN=Recql5 PE=1 SV=1	[more]
BLM_CAEEL	1.2e-69	40.53	Bloom syndrome protein homolog OS=Caenorhabditis elegans GN=him-6 PE=2 SV=2	[more]

BLAST of Csa2G00090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LES3_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G00090 PE=4 SV=1	[more]
A0A061DFK3_THECC	1.2e-225	63.58	DEAD/DEAH box RNA helicase family protein OS=Theobroma cacao GN=TCM_000111 PE=4 ...	[more]
U5GEU8_POPTR	6.1e-225	62.78	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10920g PE=4 SV=1	[more]
U5GBL6_POPTR	6.1e-225	62.78	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10920g PE=4 SV=1	[more]
I1L1R3_SOYBN	3.7e-222	64.24	Uncharacterized protein OS=Glycine max PE=4 SV=2	[more]

BLAST of Csa2G00090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35740.1	1.7e-202	58.37	DEAD/DEAH box RNA helicase family protein	[more]
AT1G10930.1	1.5e-68	39.03	DNA helicase (RECQl4A)	[more]
AT1G31360.1	4.2e-68	41.43	RECQ helicase L2	[more]
AT1G60930.1	1.7e-64	39.61	RECQ helicase L4B	[more]
AT3G05740.1	9.1e-63	39.88	RECQ helicase l1	[more]

BLAST of Csa2G00090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449446630\|ref\|XP_004141074.1\|	0.0e+00	100.00	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus]	[more]
gi\|700205381\|gb\|KGN60500.1\|	0.0e+00	100.00	hypothetical protein Csa_2G00090 [Cucumis sativus]	[more]
gi\|659071451\|ref\|XP_008459885.1\|	0.0e+00	96.06	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo]	[more]
gi\|659071453\|ref\|XP_008459892.1\|	1.7e-265	97.10	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo]	[more]
gi\|778665494\|ref\|XP_011648575.1\|	1.2e-253	99.78	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR004589	DNA_helicase_ATP-dep_RecQ
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase
IPR001650	Helicase_C
IPR004589	DNA_helicase_ATP-dep_RecQ
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase

Vocabulary: **Biological Process**
Term	Definition
GO:0006310	DNA recombination
GO:0006310	DNA recombination

Vocabulary: **Molecular Function**
Term	Definition
GO:0008026	ATP-dependent helicase activity
GO:0008026	ATP-dependent helicase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003678	DNA helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005524	ATP binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU116809	cucumber EST collection version 3.0	transcribed_cluster
CU119914	cucumber EST collection version 3.0	transcribed_cluster
CU130629	cucumber EST collection version 3.0	transcribed_cluster
CU132277	cucumber EST collection version 3.0	transcribed_cluster
CU162274	cucumber EST collection version 3.0	transcribed_cluster
CU165529	cucumber EST collection version 3.0	transcribed_cluster
CU174827	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G00090.1	Csa2G00090.1	mRNA
Csa2G00090.2	Csa2G00090.2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU130629	CU130629	transcribed_cluster
CU162274	CU162274	transcribed_cluster
CU165529	CU165529	transcribed_cluster
CU174827	CU174827	transcribed_cluster
CU116809	CU116809	transcribed_cluster
CU132277	CU132277	transcribed_cluster
CU119914	CU119914	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 138..241 score: 1.0
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 162..243 score: 3.0
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 131..286 score: 18
IPR004589	DNA helicase, ATP-dependent, RecQ type	TIGRFAMs	TIGR00614	TIGR00614	coord: 9..334 score: 1.9E
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 273..336 score: 5.3
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 1..111 score: 14
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 116..259 score: 2.9E-48coord: 18..115 score: 3.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 117..342 score: 9.1E-48coord: 19..109 score: 2.34
None	No IPR available	unknown	Coil	Coil	coord: 451..471 scor
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 9..332 score: 3.1E-143coord: 359..371 score: 3.1E
None	No IPR available	PANTHER	PTHR13710:SF81	ATP-DEPENDENT DNA HELICASE Q-LIKE 3	coord: 9..332 score: 3.1E-143coord: 359..371 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G00090	Cla016867	Watermelon (97103) v1	cuwmB162
Csa2G00090	MELO3C004659	Melon (DHL92) v3.5.1	cumeB140
Csa2G00090	ClCG11G001380	Watermelon (Charleston Gray)	cuwcgB096
Csa2G00090	Lsi11G001520	Bottle gourd (USVL1VR-Ls)	culsiB098
Csa2G00090	MELO3C004659.2	Melon (DHL92) v3.6.1	cumedB133
Csa2G00090	Cla97C11G207760	Watermelon (97103) v2	cuwmbB103
Csa2G00090	Bhi06G001373	Wax gourd	cuwgoB129
Csa2G00090	CSPI02G00090	Wild cucumber (PI 183967)	cpicuB065
Csa2G00090	Cucsa.117370	Cucumber (Gy14) v1	cgycuB150
Csa2G00090	CsGy2G000110	Cucumber (Gy14) v2	cgybcuB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G00090	Cucurbita moschata (Rifu)	cmocuB783
Csa2G00090	Cucurbita pepo (Zucchini)	cpecuB103
Csa2G00090	Cucurbita pepo (Zucchini)	cpecuB130
Csa2G00090	Cucurbita pepo (Zucchini)	cpecuB543
Csa2G00090	Silver-seed gourd	carcuB0598
Csa2G00090	Cucurbita maxima (Rimu)	cmacuB791