CsGy2G000110 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy2G000110
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ATP-dependent DNA helicase
Location	Chr2 : 95662 .. 101299 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTGTTGTTTGTCCTTTAATAGGTGAATGCTATTCAGTTTCTTTATTTACAGTTTGGACGATTTTAACTACCAAAATGTTTTTTTGTATAAGATAATTCTCCCTGCTCTTGCCTAAATCATCAAGTATTCGCTTGCAGCATTGATGGTAAGCATCGAAGTGTTTGTTTCTTGTTCCCTTTCTGACAATTGTGTTTCTCGGTTTGTAATTCTTTGACAATTTCCACAACGCTGATCGCACTATATCAGGAAAACCAAGTGATGGCCTTGAAGGAAAAGGGAATTTCTGCTGAATATTTATCCTCGACTCAGTCAACACAGGCCAAAAATAAAGTGAATCATCTCCTAATCATACTTGTATTATGATGTCTGCTTTGACGACACTCATTATTCCTCAAATTATTATTATTTTTTAAAAAGCAAATCTATATTATTATTATTTTCTTTGTAAATATTTTAAGAAGTTTTGACATTTAAATTAATTTTCCTATTCTTACTACTCATCTGTATGGGTAGGTATCATCAGTCTTTCTAAAGCAATACCAAAATTAGCTGTATTCTACTTGCACGAGGTTGTTTAAAGTTATTTTTAGATTACAAACTTATTGTTATTCCATCACCTTGCTATTTTTCAACCTTGTCTGTGAAGAAAGTTTCATCATGGTCTTAAATATTTTTTGCATGTAATAGAATAGAAGAGCAGGAAGATGCCTTTGTTTCCGTTCTCCTTATTGTGGAAATCTTTTGTTGTTCATAAGCTCGTCCTCTCATCTTTCATAATTTCTGTTTACTTGATACAAACATTACTTACCCAGAAACAATGCGTGTAACAATCTTCTTCATCCAGATTCACGAAGATCTCAATTCTAGTAAACCTACTTTAAGGCTTCTCTATGTTACGCCTGAATTAATTGCAACATCAGGATTCATGGCAAAATTGATGAAAATTTATTCTAGAGGATTACTAAATCTGATTGCTATAGACGAGGTGAACTATATTCTTGTATTATGTGTGAACGCCGCGTTTTATCTTTTTCAATCACACCTTCATCTTCATTTTAATGCAATTTTCAGGCTCATTGTATTTCAACATGGGGCCATGACTTCAGGTTTGTGATAGTCATAGAGGAGATAATCAATTGTTGTCTTATAGTAATAGACTGTAATACTGACCTCTTTTTTATATTAGAGTACCGTTTCCATTTTTCTTCGTTTTCTCACCGGGTCACTCTTTGTTTTACTCTCTCTACTTTTGTGATATACCATTAAATATCAAGTTGACCAAAGCTATTGATCCTCTATACTTGTCCTATGTCAATTTAGTGCTCATCTTATTCGTAACATATGCCAATCTTGTTGCTTATGAAGGAACTTTGTTTTTCCTTCTCATCTTCTTTTTCGTTTTTTTTGGGTGGGTGGGGGAGTTTGCTTATGTAGTTTTGGTGATGTCTCCTCACTAATCACTTTTATTGCCCTTTTATGTTTTGACACAGGCCTAGCTACCGCAAGCTTTCCTCTTTGAGGAGTCAACTTCCTAATATTCCTATACTGGCTTTGACGGCTACTGCTGTTCCTAAGTGAGTTATTATCACCCTTTCACTTTAAATTTTTTTGTGGGCATCATACACTTGGTTTGAGCATACCAATCCTTTTGTCAAGTTATTATAGTTCTTAACCTTGTATTAAAATTTAAACCATCTTTTGCTTTTTTGAGTAATTTTGTCAATTGTTATCCTTTGCACGTTCATGAGATGGACTTCAGGTCTCTTTTTCTCTCACTAGCAAAAATTTGATGTATGTTCCTATGCTGATGGTGTTCTTATGAAGAGAAAGTTCTACACTTATAGTGCACAATTCAGTTGGATATGAATTTTTTTCTCTGAAAGATTCTGCAAGCGAGCATATCTCTCTGAATATCCTACTGTTCATTTTTTCATAGTCTTGCCACTATATTGGCGACAGTTTGTTGAGATTTTCCCCTCACTTTCTAGTTTCTATATGGATGGTAGAAGTCAGTGACATGTAGATACTGATTTTAAAATTCCGAGAGATTAAATCCTGGTTTTTTCTTTGTTTCCGCAGAGTGCAGAAAGATGTGATAATATCCTTGGGCTTGGAAAACCCTCTAGTTCTTAAGTCTTCATTTAATCGTCCTAACATATATTATGAAGGTTTGTCCTGGTGGCTCAACTTCGAGTGTATGTCCCCCCGCTCAATTTACATGTTGCAGCATTAGAAAATTGGGATGAACTAATTGAATATCCTCTGTTCTATACGATCTCATATTGGTGCCCCTCATCAGTCATACAAAATAAAGAACTTGATCTTATTTTCTCCTCCAATGGCTAGGCTGTTGATACCCTGGATGATGTGCTCCCTGTCACATTTCTCATGCTGTCCCAGGAAATCTAATATGATTTTTTGGACCATTTTTTTTTCTTTATTTTTAATGTAGTAGGCTTAGAATAGATTAGGGTATCTTGATCAACTCCATCTTTGATTAGGATTAGGATTTGTTAGGATTATGATTATTTTCTTGGGTTTAATAGGGATGAAATTACCTTTTTTGATTAATTAGGATTAAGATTAGTTTACTTCCCAATTCTCTATAGATGGAGGAATTATCTTCTTGTATTGATAACTTTTGATTCATAATAAAGACTTCGATTTGATTCTTAGAGGGAGTTCTCAATTTATCTCTTAGGCTATATCAATTTTGCATCTCTAATTCAAAATTATATTGAGCTAAAATTAGGTTTTAGTTGGCTCGTGTAAACTTCAGCGGTCTATCTCTAGGATGCATTGGCTGTTTGCTAGTACGTTTCATGGTTTGCATGCTAACATGAAAGTTCATGTTGTCATAGGTTCGGTAAATTTACAGTTGCATTTGAGTGAAAATTAATTATGCAGTTCGATACAAAGATCTTTTGGATGATCCACTTGCCGATTTGTGTAATCAACTGAAATCTAGTGGAGATGTTTGTGCAATCATCTATTGCCTAGAGCGTGCAATGTGCGATCAATTGTCAGTTTATCTAGCAAAATATGGCATTTCATGCGCTGGTAAGAAAAGATTTCTGCTCTTGGAATTGGATCTTCAGCACTCAGAGTTTTATTTGTTCAAATATTTACATGTTGATCGTCTGTTGGTTTTCAGCTTATCATGCGGGTTTGAAGAATGAGTTGAGGAAGTCTGTTTTAGAGGATTGGATAAGCTCTAGGATACAAGTTGTTGTGGCCACAGTAGCTTTTGGGTATAGTTCTTGATAAATCTTTATCCTCATTTAACCTCAATAGTCAGACTTGGTGTATTTTCTTTTTTAACATAAATGTCTTGAAAATTTTGTATTTGACCCTCAAACTGAAATATAATTTATACTGCACTTGATGTCATCGAGTATGTTCTATAAGCCAAACCATTAGAAGGTGAGAAAGATGTGATAAGCATGGCATTATAATTCGGTCTCACTCTTTTGAGGATTTAAATTAAATAGGTACTGTACTGTTTGTATGTTTTAAAACTATGATGTACCTTACGTTGTAATTTTGTCTTTCACTATGTCCTTTTGCCTAGAGCCACTCTGGTGCTTGCACAATTACTGAATTGGCGGTACTCCTTTCAGGATGGTAAGTATTTACTTGATTTTCTTTAAGTAAAAATTTGGACATGTGTGCTCTTGTTTTGTGCAGTACAGGAGGAGCATTAATTTTGCTAATTCCATGTTGTTGTGTTACGTAGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGTTAATTTCTGAACTGGAACTTGCTGTTCTCTTCTCTCTTTAGGCTGCATTTGATTTCACATCATCTATTTATTCATTTAACATTTTTTTCATTTTCGCAGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGGTGATTTTCTTCTTCTTTTGTAATTTGCAATGATATTTTTTGCCATTATTTTGATGTCCTGGCACAACTGAATGCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTAGGAGGAAGGTGTTAGGTCTTCAATTTATTCCAATATATGTAAGGGTAAGAAAGCAATTGCTCATGTTAGCGAGAGTGGGACGTCCATGTAAGATGGTGGGGGACCACAGTTAGTTACGTGTGTGGGAGGGTTTATTTTGCATATTCATTCTCGAGAGAGAAGTCTCAGCCTTCCTAGAGGTTGAGGAGTCTGTACTTTGCCCTAGGGCAAGTTTCTTTCACTGAATAAGAATATCGAAAGCTAGATGCCTTTCAGAAGGTCTATTTGTACAATTGGTGTCTGTTTTCTTTTCAACTCTTGAATATTGTCCCAAAAGCTAATAAATGTTTATGTAACTGTTGGATAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGGTGCTTGTCTTAAAATAGTTTAAAATTTTTAAAATGTTTAAAATTTATTATTGAAAAGGCTAGCTGTAAATCTTATAGGCCACATATTTATTGAAGTAAAATATCTTATTACTTTCTTCATTTTGTTGTACAGTTAGGTGGATGATTAGTAGATATTCGTGAGCAGGTTAAAAAATACAAACACACTTATTTTAGAAGCTTTATGCATTTTGAAGTGTTTGGAAACATAAGGAGTGCCTAAGATTGATGATCAACAAGTTTCTTACTACAGATCCTTTTCCTTGTCATTTGCTTGAATTTGTTATGTCCCTGGATTTAGACATAGTGGTAATTCCCAGACATTCGTCTGATGGGAGTGTTTGTTGTTGGAATGGTGATTATGAATAAAGTTAGGGAAGCTAGCCAGGTTAGGAGATACTGGTTAAGTATTCCAAGTAGCCTGGAATTGGAGAGTTTAATCATCCTTATTTTTAATCTTTTGTTTATCTAAATACAAATATCAGCTTGGTTCATATCGTCATCAAATTTCTCATTTCAAGATTTTGGACCGTAGACGGTTAATGGACGTTGTTACTATCCTAAATGAGCATCGATATCTTGTACTAAATGTTGTCTCAAATCCTTCATTTAGTTACTTTTAAGTCTTCTTTTGAGTACAACAAATAAGTGAGTATGAGGATTTGAACCTTTAATTTTTTTAAAAAATATGTTGACCATTGAACTATGCACAATGGGCTCTCACTGACTCAGAATTGTTTTCATGTATTGATAAAAACCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGGTACAAATCCTTTTAATGGACTCGATTGCTCTTCTTCTCTTCCAGCCACGTAG

mRNA sequence

GCTTGTTGTTTGTCCTTTAATAGTATATCAGGAAAACCAAGTGATGGCCTTGAAGGAAAAGGGAATTTCTGCTGAATATTTATCCTCGACTCAGTCAACACAGGCCAAAAATAAAATTCACGAAGATCTCAATTCTAGTAAACCTACTTTAAGGCTTCTCTATGTTACGCCTGAATTAATTGCAACATCAGGATTCATGGCAAAATTGATGAAAATTTATTCTAGAGGATTACTAAATCTGATTGCTATAGACGAGGCTCATTGTATTTCAACATGGGGCCATGACTTCAGGCCTAGCTACCGCAAGCTTTCCTCTTTGAGGAGTCAACTTCCTAATATTCCTATACTGGCTTTGACGGCTACTGCTGTTCCTAAAGTGCAGAAAGATGTGATAATATCCTTGGGCTTGGAAAACCCTCTAGTTCTTAAGTCTTCATTTAATCGTCCTAACATATATTATGAAGGTTTGTCCTGGTGGCTCAACTTCGAGTGTATGTCCCCCCGCTCAATTTACATGTTGCAGCATTAGAAAATTGGGATGAACTAATTGAATATCCTCTGTTCTATACGATCTCATATTGGTGCCCCTCATCAGTCATACAAAATAAAGAACTTGATCTTATTTTCTCCTCCAATGGCTAGGCTGTTGATACCCTGGATGATGTGCTCCCTGTCACATTTCTCATGCTGTCCCAGGAAATCTAATATGATTTTTTGGACCATTTTTTTTTCTTTATTTTTAATGTAGTAGGCTTAGAATAGATTAGGGTATCTTGATCAACTCCATCTTTGATTAGGATTAGGATTTGTTAGGATTATGATTATTTTCTTGGGTTTAATAGGGATGAAATTACCTTTTTTGATTAATTAGGATTAAGATTAGTTTACTTCCCAATTCTCTATAGATGGAGGAATTATCTTCTTGTATTGATAACTTTTGATTCATAATAAAGACTTCGATTTGATTCTTAGAGGGAGTTCTCAATTTATCTCTTAGGCTATATCAATTTTGCATCTCTAATTCAAAATTATATTGAGCTAAAATTAGGTTTTAGTTGGCTCGTGTAAACTTCAGCGGTCTATCTCTAGGATGCATTGGCTGTTTGCTAGTACGTTTCATGGTTTGCATGCTAACATGAAAGTTCATGTTGTCATAGGTTCGGTAAATTTACAGTTGCATTTGAGTGAAAATTAATTATGCAGTTCGATACAAAGATCTTTTGGATGATCCACTTGCCGATTTGTGTAATCAACTGAAATCTAGTGGAGATGTTTGTGCAATCATCTATTGCCTAGAGCGTGCAATGTGCGATCAATTGTCAGTTTATCTAGCAAAATATGGCATTTCATGCGCTGCTTATCATGCGGGTTTGAAGAATGAGTTGAGGAAGTCTGTTTTAGAGGATTGGATAAGCTCTAGGATACAAGTTGTTGTGGCCACAGTAGCTTTTGGAGCCACTCTGGTGCTTGCACAATTACTGAATTGGCGGTACTCCTTTCAGGATGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGGTACAAATCCTTTTAATGGACTCGATTGCTCTTCTTCTCTTCCAGCCACGTAG

Coding sequence (CDS)

ATGGGTATAGATAGGAAAGATGTCAGGGTTGTTTGCCATTTCAATATTCCAAAGTCAATGGAAGCTTTTTATCAAGAGTCAGGTAGAGCTGGCCGTGATCAATTACCCTCTAAAAGTTTGTTATACTATGGAATTGAAGACCGCAGAAGAATGGAATTTATTCTAAGAAATAGGTCCAGTGCTGATAAGAAGATCCTACCATCCTCAAGCTCCCAAGAAAAGCAACCGGAGAAGTCCTTAACCGACTTTACTCAGATGGTTGAGTATTGTGAGGGCTCCAGATGTCGCAGGAAGCAAATTCTTGAGAGCTTTGGGGAACAGGTTCCTGCATCCATATGTAGTAGATCATGTGATGCCTGCAAACACCCAAATATCATTGCTGCCTATTTGGAGGAGCTTACTACTTCTGCTGTTAGGCGAAATAATTCATCTTCCAGAATTTTTGTTAGCAGATCGAATACAGACGATGAAGATGAGTTTTCTGAATTTTGGAATCTCAAGGATGAAGCAAGTGAATCTGGAGAAGATATATCAAATTCTGATGGTACAAATCCTTTTAATGGACTCGATTGCTCTTCTTCTCTTCCAGCCACGTAG

Protein sequence

MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACKHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNSDGTNPFNGLDCSSSLPAT

Homology

[Close]

BLAST of CsGy2G000110 vs. NCBI nr
Match: XP_004141074.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 3.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS
Sbjct: 438 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. NCBI nr
Match: KGN60500.1 (hypothetical protein Csa_2G00090 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 3.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS
Sbjct: 225 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 284

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 285 ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 344

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS
Sbjct: 345 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 404

Query: 181 D 182
           D
Sbjct: 405 D 405

[Close]

BLAST of CsGy2G000110 vs. NCBI nr
Match: XP_011648575.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 3.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS
Sbjct: 438 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. NCBI nr
Match: XP_008459885.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 5.3e-92
Identity = 175/181 (96.69%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQ EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQSEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNI+AAYLEELTT AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNS
Sbjct: 438 KHPNIVAAYLEELTTCAVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. NCBI nr
Match: XP_008459900.1 (PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo])

HSP 1 Score: 346.7 bits (888), Expect = 5.3e-92
Identity = 175/181 (96.69%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQ EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQSEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNI+AAYLEELTT AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNS
Sbjct: 438 KHPNIVAAYLEELTTCAVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. TAIR10
Match: AT4G35740.1 (DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55
Identity = 105/181 (58.01%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGID+KDVR+VCHFNIPKSME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN   
Sbjct: 318 MGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN--- 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
                  S +       K  +DF Q+V YCEGS CRRK+ILESFGE+ P   C ++CDAC
Sbjct: 378 -------SENXXXXXXXKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPN +A  LEEL T+A RR+NSS     S +N  +E ++SEFWN  ++ S S E+IS+S
Sbjct: 438 KHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNSNEEISDS 488

Query: 181 D 182
           D
Sbjct: 498 D 488

[Close]

BLAST of CsGy2G000110 vs. TAIR10
Match: AT3G05740.1 (RECQ helicase l1)

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 49/125 (39.20%), Postives = 70/125 (56.00%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGID+ DVR V H  + K++E++YQESGRAGRD L ++ +  Y  +D  R+  +LRN   
Sbjct: 490 MGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCMLRNGQG 549

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCE-GSRCRRKQILESFGEQVPASICSRS--- 120
            +     S+ +Q K          +M +YCE  + CRR+ +LE FGE     IC  S   
Sbjct: 550 RNMDRFKSAMAQAK----------KMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNP 604

Query: 121 CDACK 122
           CD C+
Sbjct: 610 CDNCE 604

[Close]

BLAST of CsGy2G000110 vs. TAIR10
Match: AT1G10930.1 (DNA helicase (RECQl4A))

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-16
Identity = 54/166 (32.53%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGI++ DVR V H ++PKS+E ++QE GRAGRD   S  +LYYG  D  R++ ++ ++  
Sbjct: 735 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMI-SQGG 794

Query: 61  ADKKILPSS----SSQEKQPEKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSR 120
            D+  + +     +S  +  E +  +  +MV YCE    CRR   L   GE+  ++ C +
Sbjct: 795 VDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKK 854

Query: 121 SCDAC--------KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSN 154
           +CD C        K   +I   L EL      R +S+  + V R +
Sbjct: 855 TCDNCCSSQSLIDKDVTLITRQLVELVKQTGERFSSAHILEVYRGS 899

[Close]

BLAST of CsGy2G000110 vs. TAIR10
Match: AT1G31360.1 (RECQ helicase L2)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15
Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGI++ DVR V H ++ KSME +YQESGRAGRD LPS+ +L++                S
Sbjct: 375 MGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFF---------------RS 434

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEG-SRCRRKQILESFGEQVPASICSRSCDA 120
           AD   +P  SS        L +   +V YC+  ++CRR      FGE  P+  C+  CD 
Sbjct: 435 AD---VPRQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGE--PSQDCNGMCDN 475

[Close]

BLAST of CsGy2G000110 vs. TAIR10
Match: AT1G60930.1 (RECQ helicase L4B)

HSP 1 Score: 78.2 bits (191), Expect = 6.4e-15
Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGI++ DVR V H ++PKS+E ++QE GRAGRD   S  +LYY   D  R++ ++     
Sbjct: 751 MGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYSYTDYIRVKHMISQGGL 810

Query: 61  AD---KKILPSSSSQEKQPEKSLTDFTQMVEYCEGS-RCRRKQILESFGEQVPASICSRS 120
                K      +S  +  E +  +  +MV YCE    CRR   L   GE+  ++ C  +
Sbjct: 811 GQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENEVDCRRFLQLVHLGEKFDSTNCKNT 870

Query: 121 CDACKHPNII 127
           CD C    I+
Sbjct: 871 CDNCSSSKIL 880

[Close]

BLAST of CsGy2G000110 vs. Swiss-Prot
Match: sp|Q9FT72|RQL3_ARATH (ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-54
Identity = 105/181 (58.01%), Postives = 134/181 (74.03%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGID+KDVR+VCHFNIPKSME+FYQESGRAGRDQLPS+S+LYYG++DR++ME++LRN   
Sbjct: 318 MGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRN--- 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
                  S +       K  +DF Q+V YCEGS CRRK+ILESFGE+ P   C ++CDAC
Sbjct: 378 -------SENXXXXXXXKPTSDFEQIVTYCEGSGCRRKKILESFGEEFPVQQCKKTCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPN +A  LEEL T+A RR+NSS     S +N  +E ++SEFWN  ++ S S E+IS+S
Sbjct: 438 KHPNQVAHCLEELMTTASRRHNSSRIFITSSNNKTNEGQYSEFWNRNEDGSNSNEEISDS 488

Query: 181 D 182
           D
Sbjct: 498 D 488

[Close]

BLAST of CsGy2G000110 vs. Swiss-Prot
Match: sp|O94762|RECQ5_HUMAN (ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 2.8e-20
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MG+D+ +VR V H+NI KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +
Sbjct: 321 MGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEVA 380

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
                L      +   + ++  F  +V +CE   CR   I + FG+ +PA  C++ CD C
Sbjct: 381 K----LQEKRGNKASDKATIMAFDALVTFCEELGCRHAAIAKYFGDALPA--CAKGCDHC 440

Query: 121 KHPNIIAAYLEELTTSA 138
           ++P  +   LE L  S+
Sbjct: 441 QNPTAVRRRLEALERSS 451

[Close]

BLAST of CsGy2G000110 vs. Swiss-Prot
Match: sp|Q8VID5|RECQ5_MOUSE (ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.3e-20
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MG+D+ +VR V H+NI KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +
Sbjct: 322 MGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELA 381

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
                L      +   + +L  F  +V +CE   CR   I + FG+  PA  C++ CD C
Sbjct: 382 K----LQEKRGNKPSDKATLLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDYC 441

Query: 121 KHPNIIAAYLEELTTSA 138
           ++P  I   L+ L  S+
Sbjct: 442 QNPAAITKKLDALERSS 452

[Close]

BLAST of CsGy2G000110 vs. Swiss-Prot
Match: sp|D4ACP5|RECQ5_RAT (ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 53/137 (38.69%), Postives = 75/137 (54.74%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MG+D+ +VR V H+NI KSM  +YQESGRAGRD  PS   LYY   DR ++ F++R   +
Sbjct: 322 MGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELA 381

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
                L      +   + +L  F  +V +CE   CR   I + FG+  PA  C++ CD C
Sbjct: 382 K----LQEKRGNKPSDKATLLAFDALVTFCEEVGCRHAAIAKYFGDAPPA--CAKGCDCC 441

Query: 121 KHPNIIAAYLEELTTSA 138
           + P  I   L+ L  S+
Sbjct: 442 QSPAAIRKKLDALEHSS 452

[Close]

BLAST of CsGy2G000110 vs. Swiss-Prot
Match: sp|P35187|SGS1_YEAST (ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18
Identity = 44/123 (35.77%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 1    MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
            MGID+ DVR V HF +P+++E +YQE+GRAGRD   S  + Y+   D R M+ +++   +
Sbjct: 962  MGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMIQKDKN 1021

Query: 61   ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEG-SRCRRKQILESFGEQVPASICSRSCDA 120
             D+          +  EK L    Q++ YC+  + CRRK +L  F E   + +C ++CD 
Sbjct: 1022 LDR----------ENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKLCHKNCDN 1074

Query: 121  CKH 123
            C++
Sbjct: 1082 CRN 1074

[Close]

BLAST of CsGy2G000110 vs. TrEMBL
Match: tr|A0A0A0LES3|A0A0A0LES3_CUCSA (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.0e-95
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS
Sbjct: 225 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 284

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 285 ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 344

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS
Sbjct: 345 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 404

Query: 181 D 182
           D
Sbjct: 405 D 405

[Close]

BLAST of CsGy2G000110 vs. TrEMBL
Match: tr|A0A1S3CBQ2|A0A1S3CBQ2_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92
Identity = 175/181 (96.69%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQ EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQSEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNI+AAYLEELTT AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNS
Sbjct: 438 KHPNIVAAYLEELTTCAVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. TrEMBL
Match: tr|A0A1S3CBB1|A0A1S3CBB1_CUCME (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92
Identity = 175/181 (96.69%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFI+RNRSS
Sbjct: 318 MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFIIRNRSS 377

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
           ADKKILPSSSSQEKQ EKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC
Sbjct: 378 ADKKILPSSSSQEKQSEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 437

Query: 121 KHPNIIAAYLEELTTSAVRRNNSSSRIFVSRSNTDDEDEFSEFWNLKDEASESGEDISNS 180
           KHPNI+AAYLEELTT AVRRNNSSSRIFVSRSN DDEDEFSEFWNLKDEAS SGEDISNS
Sbjct: 438 KHPNIVAAYLEELTTCAVRRNNSSSRIFVSRSNADDEDEFSEFWNLKDEASGSGEDISNS 497

Query: 181 D 182
           D
Sbjct: 498 D 498

[Close]

BLAST of CsGy2G000110 vs. TrEMBL
Match: tr|A0A067L5Q9|A0A067L5Q9_JATCU (ATP-dependent DNA helicase OS=Jatropha curcas OX=180498 GN=JCGZ_22344 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 2.2e-65
Identity = 134/182 (73.63%), Postives = 156/182 (85.71%), Query Frame = 0


Query: 2   GIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSSA 61
           GIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQLP KSLLYYG++DR+RMEFILR   +A
Sbjct: 253 GIDRKDVRMVCHFNIPKSMEAFYQESGRAGRDQLPCKSLLYYGVDDRKRMEFILR---TA 312

Query: 62  DKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDACK 121
             K   +SSSQ++  +KSL+DF+QMVEYCEGS CRRK+ILESFGEQVPAS+C +SCDACK
Sbjct: 313 GSKKSQTSSSQDESSKKSLSDFSQMVEYCEGSGCRRKKILESFGEQVPASLCKKSCDACK 372

Query: 122 HPNIIAAYLEELTTS-AVRRNNSSSRIFVSRS-NTDDEDEFSEFWNLKDEASESGEDISN 181
           HPNI+A YLEELTT+ A R+ NS SRIF+S S N+ D ++FSEFWN  DEAS S EDIS+
Sbjct: 373 HPNIVAKYLEELTTTCAARQRNSFSRIFISSSTNSIDGEQFSEFWNHGDEASASEEDISD 431

[Close]

BLAST of CsGy2G000110 vs. TrEMBL
Match: tr|A0A2P4IPZ0|A0A2P4IPZ0_QUESU (Isoform 2 of atp-dependent dna helicase q-like 3 OS=Quercus suber OX=58331 GN=CFP56_23036 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.7e-65
Identity = 137/199 (68.84%), Postives = 159/199 (79.90%), Query Frame = 0


Query: 1   MGIDRKDVRVVCHFNIPKSMEAFYQESGRAGRDQLPSKSLLYYGIEDRRRMEFILRNRSS 60
           MGIDRKDVR+VCHFNIPKSMEAFYQESGRAGRDQLPS+SLLYYG++DR++MEFIL N   
Sbjct: 1   MGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGMDDRKKMEFILSNA-- 60

Query: 61  ADKKILPSSSSQEKQPEKSLTDFTQMVEYCEGSRCRRKQILESFGEQVPASICSRSCDAC 120
             K  LPS  SQE  P+KSLTDFTQMVEYCEGS CRRK+ILESFGEQVPAS+C +SCDAC
Sbjct: 61  --KNKLPSLGSQEDLPKKSLTDFTQMVEYCEGSGCRRKKILESFGEQVPASLCRKSCDAC 120

Query: 121 KHPNIIAAYLEELTTS-AVRRNNSSSRIFV-SRSNTDDEDEFSEFWNLKDEASESGEDIS 180
           KHPN++A YLEELTT+ AVR+ +S SRIF+ S S+  D ++ SEFWN  D+AS S EDIS
Sbjct: 121 KHPNLVAKYLEELTTTCAVRQKSSFSRIFISSSSDMIDGEQSSEFWNRDDDASGSDEDIS 180

Query: 181 NSDGTNPFNGLDCSSSLPA 198
           +SD           S LP+
Sbjct: 181 DSDDATEVVKSLAKSKLPS 195

The following BLAST results are available for this feature:

BLAST of CsGy2G000110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141074.1	3.0e-95	100.00	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis sativus]	[more]
KGN60500.1	3.0e-95	100.00	hypothetical protein Csa_2G00090 [Cucumis sativus]	[more]
XP_011648575.1	3.0e-95	100.00	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis sativus]	[more]
XP_008459885.1	5.3e-92	96.69	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X1 [Cucumis melo]	[more]
XP_008459900.1	5.3e-92	96.69	PREDICTED: ATP-dependent DNA helicase Q-like 3 isoform X2 [Cucumis melo]	[more]

BLAST of CsGy2G000110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35740.1	1.3e-55	58.01	DEAD/DEAH box RNA helicase family protein	[more]
AT3G05740.1	1.5e-16	39.20	RECQ helicase l1	[more]
AT1G10930.1	7.6e-16	32.53	DNA helicase (RECQl4A)	[more]
AT1G31360.1	3.8e-15	38.84	RECQ helicase L2	[more]
AT1G60930.1	6.4e-15	34.62	RECQ helicase L4B	[more]

BLAST of CsGy2G000110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FT72\|RQL3_ARATH	2.3e-54	58.01	ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE...	[more]
sp\|O94762\|RECQ5_HUMAN	2.8e-20	37.96	ATP-dependent DNA helicase Q5 OS=Homo sapiens OX=9606 GN=RECQL5 PE=1 SV=2	[more]
sp\|Q8VID5\|RECQ5_MOUSE	8.3e-20	38.69	ATP-dependent DNA helicase Q5 OS=Mus musculus OX=10090 GN=Recql5 PE=1 SV=1	[more]
sp\|D4ACP5\|RECQ5_RAT	1.4e-19	38.69	ATP-dependent DNA helicase Q5 OS=Rattus norvegicus OX=10116 GN=Recql5 PE=1 SV=1	[more]
sp\|P35187\|SGS1_YEAST	7.7e-18	35.77	ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]

BLAST of CsGy2G000110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LES3\|A0A0A0LES3_CUCSA	2.0e-95	100.00	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_2G00090 PE=3 SV=1	[more]
tr\|A0A1S3CBQ2\|A0A1S3CBQ2_CUCME	3.5e-92	96.69	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]
tr\|A0A1S3CBB1\|A0A1S3CBB1_CUCME	3.5e-92	96.69	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103498866 PE=3 SV=1	[more]
tr\|A0A067L5Q9\|A0A067L5Q9_JATCU	2.2e-65	73.63	ATP-dependent DNA helicase OS=Jatropha curcas OX=180498 GN=JCGZ_22344 PE=3 SV=1	[more]
tr\|A0A2P4IPZ0\|A0A2P4IPZ0_QUESU	3.7e-65	68.84	Isoform 2 of atp-dependent dna helicase q-like 3 OS=Quercus suber OX=58331 GN=CF...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR032284	RecQ_Zn-bd
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy2G000110.1	CsGy2G000110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 2..32 e-value: 9.4E-5 score: 22.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 1..77 score: 10.011
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 1..42 e-value: 1.4382E-7 score: 46.4621
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..163 e-value: 4.2E-34 score: 119.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..198
None	No IPR available	PANTHER	PTHR13710:SF105	BLOOM SYNDROME PROTEIN	coord: 1..132
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 1..132
IPR032284	ATP-dependent DNA helicase RecQ, zinc-binding domain	PFAM	PF16124	RecQ_Zn_bind	coord: 46..121 e-value: 1.5E-14 score: 54.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..133

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy2G000110	Cla016867	Watermelon (97103) v1	cgybwmB154
CsGy2G000110	Csa2G00090	Cucumber (Chinese Long) v2	cgybcuB056
CsGy2G000110	MELO3C004659	Melon (DHL92) v3.5.1	cgybmeB121
CsGy2G000110	ClCG11G001380	Watermelon (Charleston Gray)	cgybwcgB094
CsGy2G000110	CSPI02G00090	Wild cucumber (PI 183967)	cgybcpiB056
CsGy2G000110	CmaCh12G013280	Cucurbita maxima (Rimu)	cgybcmaB185
CsGy2G000110	CmoCh12G013590	Cucurbita moschata (Rifu)	cgybcmoB178
CsGy2G000110	Lsi11G001520	Bottle gourd (USVL1VR-Ls)	cgyblsiB089
CsGy2G000110	MELO3C004659.2	Melon (DHL92) v3.6.1	cgybmedB119
CsGy2G000110	CsaV3_2G001100	Cucumber (Chinese Long) v3	cgybcucB064
CsGy2G000110	Cla97C11G207760	Watermelon (97103) v2	cgybwmbB098
CsGy2G000110	Bhi06G001373	Wax gourd	cgybwgoB125
CsGy2G000110	Carg18649	Silver-seed gourd	carcgybB0887

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy2G000110	Cucurbita pepo (Zucchini)	cgybcpeB168
CsGy2G000110	Cucurbita maxima (Rimu)	cgybcmaB257
CsGy2G000110	Cucurbita moschata (Rifu)	cgybcmoB243
CsGy2G000110	Cucurbita pepo (Zucchini)	cgybcpeB225
CsGy2G000110	Silver-seed gourd	carcgybB0573