Csa2G000210 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa2G000210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionELF4-like protein; contains IPR009741 (Protein of unknown function DUF1313)
LocationChr2 : 132451 .. 132753 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

mRNA sequence

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

Coding sequence (CDS)

ATGGAGGGGGAGACATTGTCAAGAGGAGAAATTGATGGGAAAATGGTGCAGAGATTTCAAAAGAATTTCGTTCAAGTACAGAACATTTTGGAGCAAAACAGAATGTTGATCAATGAAATAAACCAAAATCAGGAGTCGAGAATGGCGGGTAATGTGAGCAGAAACGTGGGTCTGATTCGAGAGCTGAACAACAACATCAGAAGAGTTGTTGATTTATATGCTGATCTCTCCACTTCCTTCACCAAATCCAACGAACATGGAGACTCCGCGGCCAAGCCTGGCTACAAGCGCAACCGCCCATAG

Protein sequence

MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP*
Homology
[Close]
BLAST of Csa2G000210 vs. Swiss-Prot
Match: EF4L3_ARATH (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana GN=EFL3 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-27
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 1 

Query: 1   MEGETLSRG-----EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 101
           VGLIRELNNN+RRV  LY DLS +F+KS E    GDS+   G +R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]
BLAST of Csa2G000210 vs. Swiss-Prot
Match: EF4L4_ARATH (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana GN=EFL4 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.1e-24
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 1 

Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S +        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]
BLAST of Csa2G000210 vs. Swiss-Prot
Match: EF4L2_ARATH (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana GN=EFL2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-23
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 1 

Query: 1   MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF +S +        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]
BLAST of Csa2G000210 vs. Swiss-Prot
Match: ELF4_ARATH (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana GN=ELF4 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-16
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 4   ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELN 63
           E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
            NI +VV++Y+DL+TSF+ S  HG      G
Sbjct: 75  GNISKVVNMYSDLNTSFS-SGFHGGKNGHDG 103

[Close]
BLAST of Csa2G000210 vs. Swiss-Prot
Match: EF4L1_ARATH (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 12  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVD 71
           D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 72  LYADLSTSFTKSNEHGDSAAKPG 95
           +Y+DLS +F K  +      K G
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDG 116

[Close]
BLAST of Csa2G000210 vs. TrEMBL
Match: A0A0A0LIL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000210 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]
BLAST of Csa2G000210 vs. TrEMBL
Match: B9MSX7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s14610g PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 1.8e-30
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+T S      +IDGK++Q FQKNFVQVQNIL+QNR+LINEINQN ES++  N+SRNV
Sbjct: 1   MEGDTFSGLGNGTQIDGKILQTFQKNFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKS---NEHGDSA------AKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS   +  GDS+       K G+KRNRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSMDASSEGDSSGALKSDGKGGHKRNRP 113

[Close]
BLAST of Csa2G000210 vs. TrEMBL
Match: M0T649_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.0e-30
Identity = 72/107 (67.29%), Postives = 86/107 (80.37%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S      ++DGK++Q FQK+F+QV+NIL+QNR LINEINQN ES++  N+SRNV
Sbjct: 1   MEGDRFSGLGNGTQVDGKVLQTFQKSFLQVENILDQNRQLINEINQNHESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLS SFT+S E    GDS  KPG+KRNRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSLSFTRSMEASSEGDSEGKPGHKRNRP 107

[Close]
BLAST of Csa2G000210 vs. TrEMBL
Match: F6HGP9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01370 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.3e-30
Identity = 76/113 (67.26%), Postives = 89/113 (78.76%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+T S      +IDGK++Q FQK+FVQVQNIL+QNR+LINEINQN ES++  N+SRNV
Sbjct: 36  MEGDTFSGLGNGTQIDGKVLQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 95

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKS---NEHGDSA------AKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS   +  GDS+       K G+KRNRP
Sbjct: 96  GLIRELNNNIRRVVDLYADLSTSFTKSVDGSSEGDSSGALRSDGKAGHKRNRP 148

[Close]
BLAST of Csa2G000210 vs. TrEMBL
Match: A0A0D2U8R9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G087000 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 5.3e-30
Identity = 77/120 (64.17%), Postives = 91/120 (75.83%), Query Frame = 1 

Query: 1   MEGETL----SRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+TL      G+IDGK+VQ FQK+FVQVQNIL+QNR+LINEINQN ES++  N+ RNV
Sbjct: 1   MEGDTLRLGKGGGQIDGKVVQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLGRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTK-----SNEHGDSA-----------AKPGYKRNRP 101
           GLI+ELNNNIRRVVDLYADLSTSFTK     S+E GDS+           +K G+KRNRP
Sbjct: 61  GLIKELNNNIRRVVDLYADLSTSFTKSTDIASSEGGDSSGGGGAMKYSDGSKGGHKRNRP 120

[Close]
BLAST of Csa2G000210 vs. TAIR10
Match: AT2G06255.1 (AT2G06255.1 ELF4-like 3)

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28
Identity = 64/108 (59.26%), Postives = 80/108 (74.07%), Query Frame = 1 

Query: 1   MEGETLSRG-----EIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T+SR      ++DGK++Q F+K+FVQVQNIL+ NR+LINEINQN ES++  N+ RN
Sbjct: 1   MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSNE---HGDSAAKPGYKRNRP 101
           VGLIRELNNN+RRV  LY DLS +F+KS E    GDS+   G +R RP
Sbjct: 61  VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDSSEGRGNRRIRP 108

[Close]
BLAST of Csa2G000210 vs. TAIR10
Match: AT1G17455.1 (AT1G17455.1 ELF4-like 4)

HSP 1 Score: 110.9 bits (276), Expect = 4.6e-25
Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 1 

Query: 1  MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
          MEG+ LS    R  +DGK++Q FQK+FV VQ+IL+QNR+LINEINQN ES+   N+ RNV
Sbjct: 1  MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60

Query: 61 GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
          GLI+ELNNNIRRV  LY DLS SF +S +        G
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSG 98

[Close]
BLAST of Csa2G000210 vs. TAIR10
Match: AT1G72630.1 (AT1G72630.1 ELF4-like 2)

HSP 1 Score: 110.5 bits (275), Expect = 6.0e-25
Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 1 

Query: 1   MEGETLS----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+  S    R ++DGK++Q FQK+FVQVQ+IL+QNR+LINEINQN ES+ A ++ RNV
Sbjct: 5   MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
           GLIRELNNNIR V  LY DLS SF +S +        G
Sbjct: 65  GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTG 102

[Close]
BLAST of Csa2G000210 vs. TAIR10
Match: AT2G40080.1 (AT2G40080.1 Protein of unknown function (DUF1313))

HSP 1 Score: 84.7 bits (208), Expect = 3.5e-17
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1 

Query: 4   ETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELN 63
           E   +GE D  M +   +NF QVQ++L++NR LI ++N N +SRMA N+S+NV LI+ELN
Sbjct: 15  EEAEQGE-DPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELN 74

Query: 64  NNIRRVVDLYADLSTSFTKSNEHGDSAAKPG 95
            NI +VV++Y+DL+TSF+ S  HG      G
Sbjct: 75  GNISKVVNMYSDLNTSFS-SGFHGGKNGHDG 103

[Close]
BLAST of Csa2G000210 vs. TAIR10
Match: AT2G29950.1 (AT2G29950.1 ELF4-like 1)

HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 1 

Query: 12  DGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIRELNNNIRRVVD 71
           D ++       F + Q  L+QNR LI  +N+N  SR+  NVSRNVGLI E+N NI +V++
Sbjct: 34  DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93

Query: 72  LYADLSTSFTKSNEHGDSAAKPG 95
           +Y+DLS +F K  +      K G
Sbjct: 94  IYSDLSLNFAKKFDQRRRTTKDG 116

[Close]
BLAST of Csa2G000210 vs. NCBI nr
Match: gi|700205393|gb|KGN60512.1| (hypothetical protein Csa_2G000210 [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 

Query: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60
           MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR
Sbjct: 1   MEGETLSRGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNVGLIR 60

Query: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 101
           ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP
Sbjct: 61  ELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 100

[Close]
BLAST of Csa2G000210 vs. NCBI nr
Match: gi|698473681|ref|XP_009784512.1| (PREDICTED: protein ELF4-LIKE 3-like [Nicotiana sylvestris])

HSP 1 Score: 145.2 bits (365), Expect = 6.2e-32
Identity = 75/104 (72.12%), Postives = 87/104 (83.65%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+TLS      +IDGK+VQ FQKNFVQVQNIL+QNR+LINEINQNQES++  N+SRNV
Sbjct: 1   MEGDTLSGLGNVTQIDGKVVQTFQKNFVQVQNILDQNRLLINEINQNQESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS ++       G+KR+RP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSVDNSSEGDSSGHKRSRP 104

[Close]
BLAST of Csa2G000210 vs. NCBI nr
Match: gi|697130721|ref|XP_009619416.1| (PREDICTED: protein ELF4-LIKE 3 [Nicotiana tomentosiformis])

HSP 1 Score: 141.7 bits (356), Expect = 6.8e-31
Identity = 73/104 (70.19%), Postives = 86/104 (82.69%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+T S      +IDGK+VQ FQK+FVQVQNIL+QNR+LINEINQNQES++  N+SRNV
Sbjct: 1   MEGDTFSGLGNGTQIDGKVVQTFQKSFVQVQNILDQNRLLINEINQNQESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKSNEHGDSAAKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS ++       G+KR+RP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSVDNSSEGDSSGHKRSRP 104

[Close]
BLAST of Csa2G000210 vs. NCBI nr
Match: gi|566176437|ref|XP_006381644.1| (hypothetical protein POPTR_0006s14610g [Populus trichocarpa])

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-30
Identity = 77/113 (68.14%), Postives = 89/113 (78.76%), Query Frame = 1 

Query: 1   MEGETLSR----GEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRNV 60
           MEG+T S      +IDGK++Q FQKNFVQVQNIL+QNR+LINEINQN ES++  N+SRNV
Sbjct: 1   MEGDTFSGLGNGTQIDGKILQTFQKNFVQVQNILDQNRLLINEINQNHESKIPDNLSRNV 60

Query: 61  GLIRELNNNIRRVVDLYADLSTSFTKS---NEHGDSA------AKPGYKRNRP 101
           GLIRELNNNIRRVVDLYADLSTSFTKS   +  GDS+       K G+KRNRP
Sbjct: 61  GLIRELNNNIRRVVDLYADLSTSFTKSMDASSEGDSSGALKSDGKGGHKRNRP 113

[Close]
BLAST of Csa2G000210 vs. NCBI nr
Match: gi|1009143394|ref|XP_015889242.1| (PREDICTED: protein ELF4-LIKE 3 [Ziziphus jujuba])

HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30
Identity = 75/114 (65.79%), Postives = 90/114 (78.95%), Query Frame = 1 

Query: 1   MEGETLS-----RGEIDGKMVQRFQKNFVQVQNILEQNRMLINEINQNQESRMAGNVSRN 60
           MEG+T S       ++DGK++Q FQK+FVQVQNIL+QNR+LINEINQN ES++  N+SRN
Sbjct: 1   MEGDTFSGLGNGTTQVDGKILQTFQKSFVQVQNILDQNRLLINEINQNHESKIPDNLSRN 60

Query: 61  VGLIRELNNNIRRVVDLYADLSTSFTKS---NEHGDSA------AKPGYKRNRP 101
           VGLIRELNNNIRRVVDLYADLSTSFTKS   ++ GDS+       K G+KRNRP
Sbjct: 61  VGLIRELNNNIRRVVDLYADLSTSFTKSMDASDEGDSSGALKSDGKAGHKRNRP 114

The following BLAST results are available for this feature:
BLAST of Csa2G000210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF4L3_ARATH3.5e-2759.26Protein ELF4-LIKE 3 OS=Arabidopsis thaliana GN=EFL3 PE=3 SV=1[more]
EF4L4_ARATH8.1e-2458.16Protein ELF4-LIKE 4 OS=Arabidopsis thaliana GN=EFL4 PE=2 SV=1[more]
EF4L2_ARATH1.1e-2358.16Protein ELF4-LIKE 2 OS=Arabidopsis thaliana GN=EFL2 PE=2 SV=1[more]
ELF4_ARATH6.2e-1648.35Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana GN=ELF4 PE=1 SV=1[more]
EF4L1_ARATH2.1e-1142.17Protein ELF4-LIKE 1 OS=Arabidopsis thaliana GN=EFL1 PE=2 SV=1[more]
BLAST of Csa2G000210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIL2_CUCSA1.5e-48100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000210 PE=4 SV=1[more]
B9MSX7_POPTR1.8e-3068.14Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s14610g PE=4 SV=1[more]
M0T649_MUSAM4.0e-3067.29Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
F6HGP9_VITVI5.3e-3067.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g01370 PE=4 SV=... [more]
A0A0D2U8R9_GOSRA5.3e-3064.17Uncharacterized protein OS=Gossypium raimondii GN=B456_010G087000 PE=4 SV=1[more]
BLAST of Csa2G000210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G06255.12.0e-2859.26 ELF4-like 3[more]
AT1G17455.14.6e-2558.16 ELF4-like 4[more]
AT1G72630.16.0e-2558.16 ELF4-like 2[more]
AT2G40080.13.5e-1748.35 Protein of unknown function (DUF1313)[more]
AT2G29950.11.2e-1242.17 ELF4-like 1[more]
BLAST of Csa2G000210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205393|gb|KGN60512.1|2.1e-48100.00hypothetical protein Csa_2G000210 [Cucumis sativus][more]
gi|698473681|ref|XP_009784512.1|6.2e-3272.12PREDICTED: protein ELF4-LIKE 3-like [Nicotiana sylvestris][more]
gi|697130721|ref|XP_009619416.1|6.8e-3170.19PREDICTED: protein ELF4-LIKE 3 [Nicotiana tomentosiformis][more]
gi|566176437|ref|XP_006381644.1|2.6e-3068.14hypothetical protein POPTR_0006s14610g [Populus trichocarpa][more]
gi|1009143394|ref|XP_015889242.1|5.8e-3065.79PREDICTED: protein ELF4-LIKE 3 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009741EARLY_FLOWERING_4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0042753 positive regulation of circadian rhythm
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU112039cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa2G000210.1Csa2G000210.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112039CU112039transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009741Protein of unknown function DUF1313PFAMPF07011DUF1313coord: 11..89
score: 5.8
NoneNo IPR availablePANTHERPTHR33469FAMILY NOT NAMEDcoord: 1..85
score: 1.7
NoneNo IPR availablePANTHERPTHR33469:SF3PROTEIN ELF4-LIKE 2-RELATEDcoord: 1..85
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa2G000210Cla011173Watermelon (97103) v1cuwmB114
Csa2G000210Cla016856Watermelon (97103) v1cuwmB162
Csa2G000210MELO3C004647Melon (DHL92) v3.5.1cumeB140
Csa2G000210MELO3C015510Melon (DHL92) v3.5.1cumeB110
Csa2G000210ClCG03G015230Watermelon (Charleston Gray)cuwcgB134
Csa2G000210ClCG11G001490Watermelon (Charleston Gray)cuwcgB096
Csa2G000210Lsi06G003150Bottle gourd (USVL1VR-Ls)culsiB134
Csa2G000210Lsi11G001630Bottle gourd (USVL1VR-Ls)culsiB098
Csa2G000210MELO3C015510.2Melon (DHL92) v3.6.1cumedB110
Csa2G000210MELO3C004647.2Melon (DHL92) v3.6.1cumedB133
Csa2G000210Cla97C11G207870Watermelon (97103) v2cuwmbB103
Csa2G000210Cla97C03G065460Watermelon (97103) v2cuwmbB130
Csa2G000210Bhi06G001381Wax gourdcuwgoB141
Csa2G000210Bhi02G001526Wax gourdcuwgoB211
Csa2G000210CSPI02G00210Wild cucumber (PI 183967)cpicuB065
Csa2G000210CSPI01G28550Wild cucumber (PI 183967)cpicuB020
Csa2G000210Cucsa.117270Cucumber (Gy14) v1cgycuB150
Csa2G000210Cucsa.141600Cucumber (Gy14) v1cgycuB206
Csa2G000210CmaCh11G007220Cucurbita maxima (Rimu)cmacuB119
Csa2G000210CmaCh05G014160Cucurbita maxima (Rimu)cmacuB791
Csa2G000210CmaCh10G007540Cucurbita maxima (Rimu)cmacuB075
Csa2G000210CmoCh10G007830Cucurbita moschata (Rifu)cmocuB065
Csa2G000210CmoCh11G007360Cucurbita moschata (Rifu)cmocuB105
Csa2G000210Cp4.1LG04g11030Cucurbita pepo (Zucchini)cpecuB662
Csa2G000210Cp4.1LG18g03260Cucurbita pepo (Zucchini)cpecuB370
Csa2G000210Cp4.1LG11g11970Cucurbita pepo (Zucchini)cpecuB103
Csa2G000210CsGy1G027680Cucumber (Gy14) v2cgybcuB019
Csa2G000210Carg21936Silver-seed gourdcarcuB0902
Csa2G000210Carg10784Silver-seed gourdcarcuB0598
Csa2G000210Carg12969Silver-seed gourdcarcuB0102
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Csa2G000210Csa1G595850Cucumber (Chinese Long) v2cucuB010
The following block(s) are covering this gene:
GeneOrganismBlock
Csa2G000210Cucurbita moschata (Rifu)cmocuB154
Csa2G000210Cucurbita moschata (Rifu)cmocuB783
Csa2G000210Watermelon (97103) v1cuwmB119
Csa2G000210Cucurbita pepo (Zucchini)cpecuB130
Csa2G000210Cucurbita pepo (Zucchini)cpecuB543
Csa2G000210Cucurbita pepo (Zucchini)cpecuB816
Csa2G000210Cucumber (Gy14) v2cgybcuB056
Csa2G000210Silver-seed gourdcarcuB0910
Csa2G000210Watermelon (97103) v2cuwmbB156
Csa2G000210Wax gourdcuwgoB129
Csa2G000210Cucurbita maxima (Rimu)cmacuB170