Csa1G699590 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G699590
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 28117056 .. 28117514 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAACGACGTAGATCAGGCTTCACCAGCGACTAATTTCAGCACAAGAGAGAGATCCGATGTTGGGACTCAACTAATGTGGCAACCCAAAATTTGGCGTGTTGAGCTGAGCGGTGTATAGGCGACGAGCGTCATTGGCTGGTCGACGTACGTCTGGTGATTGGTGCGATGAGAGAGTGAGAATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAACAA

mRNA sequence

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA

Coding sequence (CDS)

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA

Protein sequence

MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPRRSLKLPVFKNILPLPLPSFLISFDPHRFIFS*
Homology
[Close]
BLAST of Csa1G699590 vs. TrEMBL
Match: A0A0A0LY79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699590 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

[Close]
BLAST of Csa1G699590 vs. NCBI nr
Match: gi|700211734|gb|KGN66830.1| (hypothetical protein Csa_1G699590 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

The following BLAST results are available for this feature:
BLAST of Csa1G699590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY79_CUCSA3.7e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699590 PE=4 SV=1[more]
BLAST of Csa1G699590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211734|gb|KGN66830.1|5.2e-46100.00hypothetical protein Csa_1G699590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G699590.1Csa1G699590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G699590CSPI01G34040Wild cucumber (PI 183967)cpicuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G699590Cucumber (Gy14) v1cgycuB470
Csa1G699590Cucurbita maxima (Rimu)cmacuB207
Csa1G699590Cucurbita maxima (Rimu)cmacuB396
Csa1G699590Cucurbita moschata (Rifu)cmocuB192
Csa1G699590Cucurbita moschata (Rifu)cmocuB387
Csa1G699590Melon (DHL92) v3.5.1cumeB017
Csa1G699590Watermelon (Charleston Gray)cuwcgB023
Csa1G699590Watermelon (97103) v1cuwmB044
Csa1G699590Cucurbita pepo (Zucchini)cpecuB518
Csa1G699590Cucurbita pepo (Zucchini)cpecuB530
Csa1G699590Bottle gourd (USVL1VR-Ls)culsiB033
Csa1G699590Cucumber (Gy14) v2cgybcuB002
Csa1G699590Melon (DHL92) v3.6.1cumedB012
Csa1G699590Silver-seed gourdcarcuB0251
Csa1G699590Watermelon (97103) v2cuwmbB011
Csa1G699590Wax gourdcuwgoB031