CSPI01G34040 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G34040
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 28986344 .. 28987093 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTCACCTTTGCTAAACAGCACACTAACGAGTATCCCTCGTCCAAAAGTCAAGGTCGTCACCAAAAGTTTGCCTAACAACGTCTAAATTTCATTCCCAATCGGCTGGACAGCAGCTAACTCCTTCAAAAATACTCAGATATATCTAACAACTAAATATGATGGTATTGACTAATTTGGGTTAAAAGCTAATAGGGGTATTTGAAAACTCCAAGAAATCCATATATAGATACTCACCAAAATTCAAAATTTACCTACAACAGTTCCAACGACGTAGATCAGGCTTCACCAGCGACTAATTTCAGCACAAGAGAGAGATCCGATGTTGGGACTCAACTAATGTGGCAACCCAAAATTTGGCGTGTTGAGCTGAGCGGTGTATAGGCGACGAGCGTCATTGGCTGGTCGACGTACGTCTGGTGATTGGTGCGATGAGAGAGTGAGAATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAACAACTCATCAACAATTTGCATTTCATAAAAC

mRNA sequence

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA

Coding sequence (CDS)

ATGGAGTGTGAAGGAGAGATCAAGTATTTCAGATCTGGGGCGGGGCAGAAAAGACTTGAACGGCGAGGTGAGCTAGATGATGAGAAGGAACAAAAGCCGGCGGCAGAATACTGGTGCGTGGTTGTTCGGTGGAAAGGAAAGAATGCATCGAAAGGGGGGTCCGTCGGCGAGATACCAAGAAGATCTCTTAAATTACCTGTGTTTAAGAACATATTGCCCCTCCCACTCCCTTCATTTCTTATATCTTTTGATCCTCACCGCTTCATCTTTTCCTAA
Homology
[Close]
BLAST of CSPI01G34040 vs. TrEMBL
Match: A0A0A0LY79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699590 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.7e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

[Close]
BLAST of CSPI01G34040 vs. NCBI nr
Match: gi|700211734|gb|KGN66830.1| (hypothetical protein Csa_1G699590 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 1 

Query: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60
          MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR
Sbjct: 1  MECEGEIKYFRSGAGQKRLERRGELDDEKEQKPAAEYWCVVVRWKGKNASKGGSVGEIPR 60

Query: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 92
          RSLKLPVFKNILPLPLPSFLISFDPHRFIFS
Sbjct: 61 RSLKLPVFKNILPLPLPSFLISFDPHRFIFS 91

The following BLAST results are available for this feature:
BLAST of CSPI01G34040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G34040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY79_CUCSA3.7e-46100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G699590 PE=4 SV=1[more]
BLAST of CSPI01G34040 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G34040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211734|gb|KGN66830.1|5.2e-46100.00hypothetical protein Csa_1G699590 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G34040.1CSPI01G34040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G34040Csa1G699590Cucumber (Chinese Long) v2cpicuB001
CSPI01G34040CsaV3_1G045920Cucumber (Chinese Long) v3cpicucB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G34040Melon (DHL92) v3.6.1cpimedB013
CSPI01G34040Melon (DHL92) v3.6.1cpimedB022
CSPI01G34040Cucumber (Gy14) v2cgybcpiB002
CSPI01G34040Silver-seed gourdcarcpiB0256
CSPI01G34040Watermelon (97103) v2cpiwmbB011
CSPI01G34040Wax gourdcpiwgoB031
CSPI01G34040Cucumber (Gy14) v1cgycpiB496
CSPI01G34040Cucurbita maxima (Rimu)cmacpiB209
CSPI01G34040Cucurbita maxima (Rimu)cmacpiB400
CSPI01G34040Cucurbita moschata (Rifu)cmocpiB196
CSPI01G34040Cucurbita moschata (Rifu)cmocpiB390
CSPI01G34040Melon (DHL92) v3.5.1cpimeB013
CSPI01G34040Watermelon (Charleston Gray)cpiwcgB026
CSPI01G34040Watermelon (97103) v1cpiwmB045
CSPI01G34040Cucurbita pepo (Zucchini)cpecpiB520
CSPI01G34040Cucurbita pepo (Zucchini)cpecpiB532
CSPI01G34040Bottle gourd (USVL1VR-Ls)cpilsiB034