Csa1G696510 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G696510
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 27973815 .. 27974415 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGGCAAGTGCTGTGCCGCCCCCAGCCGGCTTGACTGAAATGTATGCATCATCCTTTTGCTGACTGATTATTTCATTGCTTAGAAGAACTTTTCAAACAATCAAAACCTTAATTATAGACAAAGCAGAAGCTTCCACATAAATCGTAAGGCCAAGCTTCTCTGTTCTTGATAGCCCACTTGGTGGGCTATAATGATTTTAACTTAATTTTGTTAGTTTTCCTGTTCATTAGGGTGGATTGATGTGTATTAGCTGTCATGGTATAGGAATGAAACAACGCTGAGAAAATTAGAGTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGTAAGTAAAAATCGAAATGGTAGAACCAGCTTAATGCAAGAAATTGATTGAATCTATTGATATAAAGAAATGACGTCGATCTAATTGCAATGAAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

mRNA sequence

ATGGCAAGGCAAAGTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

Coding sequence (CDS)

ATGGCAAGGCAAAGTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

Protein sequence

MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKLYWEKTHWH*
Homology
[Close]
BLAST of Csa1G696510 vs. TrEMBL
Match: A0A0A0LYF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696510 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.2e-39
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR 60
          MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR
Sbjct: 1  MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR 60

Query: 61 TLCKLYWEKTHWH 74
          TLCKLYWEKTHWH
Sbjct: 61 TLCKLYWEKTHWH 73

[Close]
BLAST of Csa1G696510 vs. NCBI nr
Match: gi|700211722|gb|KGN66818.1| (hypothetical protein Csa_1G696510 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-39
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR 60
          MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR
Sbjct: 1  MARQSSKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNAR 60

Query: 61 TLCKLYWEKTHWH 74
          TLCKLYWEKTHWH
Sbjct: 61 TLCKLYWEKTHWH 73

The following BLAST results are available for this feature:
BLAST of Csa1G696510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYF3_CUCSA1.2e-39100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696510 PE=4 SV=1[more]
BLAST of Csa1G696510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211722|gb|KGN66818.1|1.7e-39100.00hypothetical protein Csa_1G696510 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G696510.1Csa1G696510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G696510CsGy1G032460Cucumber (Gy14) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G696510Watermelon (97103) v2cuwmbB075
Csa1G696510Watermelon (97103) v2cuwmbB082
Csa1G696510Wax gourdcuwgoB116
Csa1G696510Cucumber (Gy14) v1cgycuB470
Csa1G696510Cucurbita moschata (Rifu)cmocuB084
Csa1G696510Melon (DHL92) v3.5.1cumeB045
Csa1G696510Watermelon (Charleston Gray)cuwcgB077
Csa1G696510Watermelon (Charleston Gray)cuwcgB085
Csa1G696510Watermelon (97103) v1cuwmB044
Csa1G696510Watermelon (97103) v1cuwmB089
Csa1G696510Cucurbita pepo (Zucchini)cpecuB660
Csa1G696510Bottle gourd (USVL1VR-Ls)culsiB080
Csa1G696510Melon (DHL92) v3.6.1cumedB037
Csa1G696510Silver-seed gourdcarcuB0036