CsGy1G032460 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G032460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 32081663 .. 32082393 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGAATATTCGACGCGGTGGTGAAACCAGTGTCCACCATTTCTCCGGTAACAACGGACGTCGAGTTCGAGGAAGTTAAAATTATTGATTCTGATTTGCGGCAGGAATTTTAGTGAATATTATAAATGGCAAGGCAAGTGCTGTGCCGCCCCCAGCCGGCTTGACTGAAATGTATGCATCATCCTTTTGCTGACTGATTATTTCATTGCTTAGAAGAACTTTTCAAACAATCAAAACCTTAATTATAGACAAAGCAGAAGCTTCCACATAAATCGTAAGGCCAAGCTTCTCTGTTCTTGATAGCCCACTTGGTGGGCTATAATGATTTTAACTTAATTTTGTTAGTTTTCCTGTTCATTAGGGTGGATTGATGTGTATTAGCTGTCATGGTATAGGAATGAAACAACGCTGAGAAAATTAGAGTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGTAAGTAAAAATCGAAATGGTAGAACCAGCTTAATGCAAGAAATTGATTGAATCTATTGATATAAAGAAATGACGTCGATCTAATTGCAATGAAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

mRNA sequence

ATGGTGGAGAATATTCGACGCGGTGGTGAAACCAGTGTCCACCATTTCTCCGGTAACAACGGACGTCGAGTTCGAGGAAGAATTTTAGTGAATATTATAAATGGCAAGGCAAGTGCTGTGCCGCCCCCAGCCGGCTTGACTGAAATTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

Coding sequence (CDS)

ATGGTGGAGAATATTCGACGCGGTGGTGAAACCAGTGTCCACCATTTCTCCGGTAACAACGGACGTCGAGTTCGAGGAAGAATTTTAGTGAATATTATAAATGGCAAGGCAAGTGCTGTGCCGCCCCCAGCCGGCTTGACTGAAATTTCCAAGTGTGTGAAGAAGACCATACAAAAGAATTGCGAGCCTTTACCTTGGCGTGTGATATATAGCGTTGTGGCACGAAGAGGGCATCTTTTGTTGAAGACAGACGAGTGCCACTACTGCAGTTATTGGTGTCAATGGAGGTCACATCGGATGTTGAATGCAAGAACTCTTTGTAAGCTTTATTGGGAAAAAACACATTGGCACTGA

Protein sequence

MVENIRRGGETSVHHFSGNNGRRVRGRILVNIINGKASAVPPPAGLTEISKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKLYWEKTHWH
Homology
[Close]
BLAST of CsGy1G032460 vs. NCBI nr
Match: KGN66818.1 (hypothetical protein Csa_1G696510 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-36
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 50  SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL 109
           SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL
Sbjct: 6   SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL 65

Query: 110 YWEKTHWH 118
           YWEKTHWH
Sbjct: 66  YWEKTHWH 73

[Close]
BLAST of CsGy1G032460 vs. TrEMBL
Match: tr|A0A0A0LYF3|A0A0A0LYF3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G696510 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.6e-36
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 50  SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL 109
           SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL
Sbjct: 6   SKCVKKTIQKNCEPLPWRVIYSVVARRGHLLLKTDECHYCSYWCQWRSHRMLNARTLCKL 65

Query: 110 YWEKTHWH 118
           YWEKTHWH
Sbjct: 66  YWEKTHWH 73

The following BLAST results are available for this feature:
BLAST of CsGy1G032460 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66818.12.5e-36100.00hypothetical protein Csa_1G696510 [Cucumis sativus][more]
BLAST of CsGy1G032460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy1G032460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G032460 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LYF3|A0A0A0LYF3_CUCSA1.6e-36100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G696510 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G032460.1CsGy1G032460.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G032460Csa1G696510Cucumber (Chinese Long) v2cgybcuB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G032460Cucumber (Chinese Long) v3cgybcucB001
CsGy1G032460Watermelon (97103) v2cgybwmbB071
CsGy1G032460Watermelon (97103) v2cgybwmbB079
CsGy1G032460Wax gourdcgybwgoB110
CsGy1G032460Cucurbita moschata (Rifu)cgybcmoB035
CsGy1G032460Cucurbita pepo (Zucchini)cgybcpeB132
CsGy1G032460Bottle gourd (USVL1VR-Ls)cgyblsiB075
CsGy1G032460Melon (DHL92) v3.5.1cgybmeB041
CsGy1G032460Melon (DHL92) v3.6.1cgybmedB035
CsGy1G032460Watermelon (Charleston Gray)cgybwcgB071
CsGy1G032460Watermelon (97103) v1cgybwmB045
CsGy1G032460Watermelon (97103) v1cgybwmB088
CsGy1G032460Wild cucumber (PI 183967)cgybcpiB002
CsGy1G032460Silver-seed gourdcarcgybB0036