Csa1G662760 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G662760
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionXyloglucan endotransglucosylase/hydrolase protein 2, putative; contains IPR008985 (Concanavalin A-like lectin/glucanases superfamily)
LocationChr1 : 26741001 .. 26741375 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCAGCTTTTCTATAGATGGAATTCCAATAAGGGTGTTCAAAAACTACACATCAATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAATAA

mRNA sequence

ATGATCAGCTTTTCTATAGATGGAATTCCAATAAGGGTGTTCAAAAACTACACATCAATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAATAA

Coding sequence (CDS)

ATGATCAGCTTTTCTATAGATGGAATTCCAATAAGGGTGTTCAAAAACTACACATCAATGGGGGGGAGATATCCATCAAGTGGGATGCATGTGTTGGGAAGCATTTGGAATGGAGAAGCATGGGCATCAGATGGGAAGAAAGTGGATTGGTCTCAAGTACCTTTTCAAGCAGATTACAGAGGCTTTTCCATTCTTGGTTGCCCTTCTGGAAGCGATTGTGATTCTCAATCCTTTCTTTGGAACCAACCTAATACATGGCAACTCAATCCCACGCAGGAAAAATTCTATCAACTGATCAAGTCAAAATATTTATACTATACTTATTGTTCTAACCCCAACGCATCGCAGCTATATAAAGAGTGTCAGTTTGAATAA

Protein sequence

MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRGFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKECQFE*
Homology
[Close]
BLAST of Csa1G662760 vs. Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=3 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-22
Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 

Query: 6   IDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFS 65
           +D IP+RVFKN TS G  YPS  M V+ S+WNGE WA+DG   K++WS  PF+A+++GF+
Sbjct: 167 VDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFN 226

Query: 66  ILGCPSGSD---CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 112
             GC + ++   C S ++ WN  +  +L+ +++K Y  ++ KY+ Y YCS+
Sbjct: 227 NSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSD 277

[Close]
BLAST of Csa1G662760 vs. Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-20
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADY 61
           I F +D +PIRVFKN    G  YPS  M ++ S+WNGE WA+ G  +K++W+  PF+A Y
Sbjct: 160 IVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQY 219

Query: 62  RGFSILGC------PSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 112
           +GFS  GC       + + C S  + WN     QL+  ++K  + +++KY+ Y YCS+
Sbjct: 220 QGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSD 277

[Close]
BLAST of Csa1G662760 vs. Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.1e-20
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADY 61
           I F +D IPIRV+KN    G  YPS  M V  S+WNG+ WA+DG   KV+WS  PF A +
Sbjct: 163 IVFYVDNIPIRVYKNEN--GVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHF 222

Query: 62  RGFSILGCP------SGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPN 117
           R F++ GC       +   C+S ++ WN  N  +L+  ++K Y+ ++SKY+ Y YC++ +
Sbjct: 223 RDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRS 282

[Close]
BLAST of Csa1G662760 vs. Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.1e-17
Identity = 49/128 (38.28%), Postives = 71/128 (55.47%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYP-SSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQAD 61
           I F +D  PIRVFKN   +G ++P +  M +  S+WN + WA+ G  +K DWS+ PF A 
Sbjct: 159 IVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAS 218

Query: 62  YRGFSILGCPSGSD---CDSQ-SFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN-PN 121
           Y+GF I GC +  +   CD+Q    W+QP    L+  Q +    +++KY  Y YC++   
Sbjct: 219 YKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVRNKYTIYNYCTDRKR 278

[Close]
BLAST of Csa1G662760 vs. Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.3e-17
Identity = 45/118 (38.14%), Postives = 67/118 (56.78%), Query Frame = 1 

Query: 1   MISFSIDGIPIRVFKNYTSMGGRYP-SSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQA 60
           MI+F +D  PIRVFKN   +G RYP    M +  S+WN + WA+ G  +K DWS+ PF A
Sbjct: 159 MIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVA 218

Query: 61  DYRGFSILGCPSGSD---CDSQ-SFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 112
            YRGF + GC + ++   C +Q +  W+QP    L+  Q +    ++ ++  Y YC++
Sbjct: 219 SYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTD 276

[Close]
BLAST of Csa1G662760 vs. TrEMBL
Match: A0A0A0M0Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662760 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 4.9e-70
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1 

Query: 1   MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR 60
           MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR
Sbjct: 1   MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR 60

Query: 61  GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE 120
           GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE
Sbjct: 61  GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE 120

Query: 121 CQFE 125
           CQFE
Sbjct: 121 CQFE 124

[Close]
BLAST of Csa1G662760 vs. TrEMBL
Match: N0DX90_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 9.3e-69
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I FSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG
Sbjct: 166 IVFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 225

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC
Sbjct: 226 FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 285

Query: 122 QFE 125
           QFE
Sbjct: 286 QFE 288

[Close]
BLAST of Csa1G662760 vs. TrEMBL
Match: N0DX41_CUCSA (Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-38
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I F +D +PIRVFKN TS+GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ 
Sbjct: 160 IVFFVDQVPIRVFKNLTSIGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKS 219

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           F ILGC  G+ CDSQ+  WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 220 FGILGCQIGNQCDSQTLPWNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 278

[Close]
BLAST of Csa1G662760 vs. TrEMBL
Match: A0A0A0KXI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.5e-38
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I F +D +PIRVFKN TS+GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ 
Sbjct: 154 IVFFVDQVPIRVFKNLTSIGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKS 213

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           F ILGC  G+ CDSQ+  WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 214 FGILGCQIGNQCDSQTLPWNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 272

[Close]
BLAST of Csa1G662760 vs. TrEMBL
Match: A0A151T8S7_CAJCA (Xyloglucan endotransglucosylase/hydrolase OS=Cajanus cajan GN=KK1_018017 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-28
Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I F +DGIPIRVFKN + +G  +PS  M V  SIWNGE WAS+GK++DW Q PF A ++G
Sbjct: 164 IVFYVDGIPIRVFKNNSKVGVSFPSQQMRVTASIWNGEPWASNGKRIDWKQAPFTAHFQG 223

Query: 62  FSILGCPSGSD----CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQL 121
           F+I GC + +     C S    WN    WQLNP Q+K Y+ ++ K+L Y YCS  +  +L
Sbjct: 224 FNIHGCQTLNRNKHVCYSPHLWWNDHKHWQLNPQQQKAYEDVRKKHLLYDYCS--DRGEL 283

Query: 122 YKECQ 123
           +KECQ
Sbjct: 284 HKECQ 286

[Close]
BLAST of Csa1G662760 vs. TAIR10
Match: AT4G13080.1 (AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 1)

HSP 1 Score: 107.5 bits (267), Expect = 6.2e-24
Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1 

Query: 6   IDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADYRGFS 65
           +D IP+RVFKN TS G  YPS  M V+ S+WNGE WA+DG   K++WS  PF+A+++GF+
Sbjct: 167 VDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFN 226

Query: 66  ILGCPSGSD---CDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 112
             GC + ++   C S ++ WN  +  +L+ +++K Y  ++ KY+ Y YCS+
Sbjct: 227 NSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSD 277

[Close]
BLAST of Csa1G662760 vs. TAIR10
Match: AT4G13090.1 (AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 2)

HSP 1 Score: 100.5 bits (249), Expect = 7.6e-22
Identity = 47/118 (39.83%), Postives = 70/118 (59.32%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADY 61
           I F +D +PIRVFKN    G  YPS  M ++ S+WNGE WA+ G  +K++W+  PF+A Y
Sbjct: 160 IVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQY 219

Query: 62  RGFSILGC------PSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSN 112
           +GFS  GC       + + C S  + WN     QL+  ++K  + +++KY+ Y YCS+
Sbjct: 220 QGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSD 277

[Close]
BLAST of Csa1G662760 vs. TAIR10
Match: AT3G25050.1 (AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 3)

HSP 1 Score: 98.6 bits (244), Expect = 2.9e-21
Identity = 50/123 (40.65%), Postives = 72/123 (58.54%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDG--KKVDWSQVPFQADY 61
           I F +D IPIRV+KN    G  YPS  M V  S+WNG+ WA+DG   KV+WS  PF A +
Sbjct: 163 IVFYVDNIPIRVYKNEN--GVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHF 222

Query: 62  RGFSILGCP------SGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPN 117
           R F++ GC       +   C+S ++ WN  N  +L+  ++K Y+ ++SKY+ Y YC++ +
Sbjct: 223 RDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRS 282

[Close]
BLAST of Csa1G662760 vs. TAIR10
Match: AT5G57530.1 (AT5G57530.1 xyloglucan endotransglucosylase/hydrolase 12)

HSP 1 Score: 81.3 bits (199), Expect = 4.8e-16
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYP-SSGMHVLGSIWNGEAWASDGKKV--DWSQVPFQAD 61
           I F +DGIPIRVFKN  + G  YP S  M +  S+W  + WA+ G KV  DW+  PF A 
Sbjct: 155 IIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSAS 214

Query: 62  YRGFSILGCPSGSDCDSQSFLWN------QPNTWQ---LNPTQEKFYQLIKSKYLYYTYC 112
           YR F+ +      DC S++ +WN        N+W    LN  Q    + ++  Y+ Y YC
Sbjct: 215 YRSFNDV------DCCSRTSIWNWVTCNANSNSWMWTTLNSNQLGQLKWVQKDYMIYNYC 270

[Close]
BLAST of Csa1G662760 vs. TAIR10
Match: AT4G37800.1 (AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 7)

HSP 1 Score: 79.7 bits (195), Expect = 1.4e-15
Identity = 40/116 (34.48%), Postives = 66/116 (56.90%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPS-SGMHVLGSIWNGEAWASDG--KKVDWSQVPFQAD 61
           I F +D +PIRV+KN  +    YP    M V  ++W  + WA+ G  +K++WS+ PF A 
Sbjct: 163 IVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAY 222

Query: 62  YRGFSILGC--PSGSDCDSQSFLWNQPNTW-QLNPTQEKFYQLIKSKYLYYTYCSN 112
           Y+ F I GC  P  +DC + S  W + + + QL+P + + Y+ ++  ++ Y YC++
Sbjct: 223 YKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTD 278

[Close]
BLAST of Csa1G662760 vs. NCBI nr
Match: gi|700211616|gb|KGN66712.1| (hypothetical protein Csa_1G662760 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 7.1e-70
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 1 

Query: 1   MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR 60
           MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR
Sbjct: 1   MISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYR 60

Query: 61  GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE 120
           GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE
Sbjct: 61  GFSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKE 120

Query: 121 CQFE 125
           CQFE
Sbjct: 121 CQFE 124

[Close]
BLAST of Csa1G662760 vs. NCBI nr
Match: gi|449449697|ref|XP_004142601.1| (PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I FSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG
Sbjct: 164 IVFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 223

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC
Sbjct: 224 FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 283

Query: 122 QFE 125
           QFE
Sbjct: 284 QFE 286

[Close]
BLAST of Csa1G662760 vs. NCBI nr
Match: gi|481023344|emb|CCH26640.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-68
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I FSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG
Sbjct: 166 IVFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 225

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC
Sbjct: 226 FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 285

Query: 122 QFE 125
           QFE
Sbjct: 286 QFE 288

[Close]
BLAST of Csa1G662760 vs. NCBI nr
Match: gi|700199212|gb|KGN54370.1| (hypothetical protein Csa_4G308600 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-38
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I F +D +PIRVFKN TS+GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ 
Sbjct: 154 IVFFVDQVPIRVFKNLTSIGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKS 213

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           F ILGC  G+ CDSQ+  WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 214 FGILGCQIGNQCDSQTLPWNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 272

[Close]
BLAST of Csa1G662760 vs. NCBI nr
Match: gi|481023336|emb|CCH26636.1| (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-38
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 2   ISFSIDGIPIRVFKNYTSMGGRYPSSGMHVLGSIWNGEAWASDGKKVDWSQVPFQADYRG 61
           I F +D +PIRVFKN TS+GGRYPS GM V GSIWNGE WAS+G+KVDWSQ PFQA+Y+ 
Sbjct: 160 IVFFVDQVPIRVFKNLTSIGGRYPSQGMLVQGSIWNGEGWASNGRKVDWSQAPFQANYKS 219

Query: 62  FSILGCPSGSDCDSQSFLWNQPNTWQLNPTQEKFYQLIKSKYLYYTYCSNPNASQLYKEC 121
           F ILGC  G+ CDSQ+  WN  + W+LNP Q+  Y+ +K KY+Y TYC +P     Y+EC
Sbjct: 220 FGILGCQIGNQCDSQTLPWNNQDKWELNPKQQSDYENVKRKYVYDTYCLSPRGKN-YREC 278

The following BLAST results are available for this feature:
BLAST of Csa1G662760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XTH1_ARATH1.1e-2243.24Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thal... [more]
XTH2_ARATH1.4e-2039.83Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=X... [more]
XTH3_ARATH5.1e-2040.65Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=X... [more]
XTHA_PHAAN4.1e-1738.28Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XT... [more]
XTH_WHEAT5.3e-1738.14Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH P... [more]
BLAST of Csa1G662760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M0Q5_CUCSA4.9e-70100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662760 PE=4 SV=1[more]
N0DX90_CUCSA9.3e-6999.19Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth30 P... [more]
N0DX41_CUCSA6.5e-3860.00Putative xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus GN=xth26 P... [more]
A0A0A0KXI7_CUCSA6.5e-3860.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G308600 PE=4 SV=1[more]
A0A151T8S7_CAJCA4.7e-2849.60Xyloglucan endotransglucosylase/hydrolase OS=Cajanus cajan GN=KK1_018017 PE=3 SV... [more]
BLAST of Csa1G662760 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G13080.16.2e-2443.24 xyloglucan endotransglucosylase/hydrolase 1[more]
AT4G13090.17.6e-2239.83 xyloglucan endotransglucosylase/hydrolase 2[more]
AT3G25050.12.9e-2140.65 xyloglucan endotransglucosylase/hydrolase 3[more]
AT5G57530.14.8e-1637.70 xyloglucan endotransglucosylase/hydrolase 12[more]
AT4G37800.11.4e-1534.48 xyloglucan endotransglucosylase/hydrolase 7[more]
BLAST of Csa1G662760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211616|gb|KGN66712.1|7.1e-70100.00hypothetical protein Csa_1G662760 [Cucumis sativus][more]
gi|449449697|ref|XP_004142601.1|1.3e-6899.19PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sat... [more]
gi|481023344|emb|CCH26640.1|1.3e-6899.19putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus][more]
gi|700199212|gb|KGN54370.1|9.3e-3860.00hypothetical protein Csa_4G308600 [Cucumis sativus][more]
gi|481023336|emb|CCH26636.1|9.3e-3860.00putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000757GH16
IPR013320ConA-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0010411 xyloglucan metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU167214cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G662760.1Csa1G662760.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU167214CU167214transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 2..51
score: 2.
IPR013320Concanavalin A-like lectin/glucanase domainGENE3DG3DSA:2.60.120.200coord: 2..122
score: 2.8
IPR013320Concanavalin A-like lectin/glucanase domainunknownSSF49899Concanavalin A-like lectins/glucanasescoord: 2..113
score: 5.76
NoneNo IPR availablePANTHERPTHR31062FAMILY NOT NAMEDcoord: 2..124
score: 1.5
NoneNo IPR availablePANTHERPTHR31062:SF43XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 2-RELATEDcoord: 2..124
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G662760CSPI01G32710Wild cucumber (PI 183967)cpicuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G662760Bottle gourd (USVL1VR-Ls)culsiB058
Csa1G662760Cucumber (Gy14) v2cgybcuB002
Csa1G662760Melon (DHL92) v3.6.1cumedB035
Csa1G662760Silver-seed gourdcarcuB0927
Csa1G662760Watermelon (97103) v2cuwmbB035
Csa1G662760Cucumber (Gy14) v1cgycuB555
Csa1G662760Cucurbita maxima (Rimu)cmacuB085
Csa1G662760Cucurbita moschata (Rifu)cmocuB075
Csa1G662760Melon (DHL92) v3.5.1cumeB043
Csa1G662760Watermelon (Charleston Gray)cuwcgB038
Csa1G662760Watermelon (97103) v1cuwmB011